Variant report

Variant	esv3385368
Chromosome Location	chr5:29548608-29910057
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1082)
CpG islands
(count:0)
Chromatin interactive
region (count:67)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1082 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:29760302-29760714	HepG2	liver:	n/a	n/a
2	ARID3A	chr5:29760967-29761167	HepG2	liver:	n/a	n/a
3	ARID3A	chr5:29896794-29896994	HepG2	liver:	n/a	n/a
4	ARID3A	chr5:29780422-29781131	HepG2	liver:	n/a	n/a
5	ARID3A	chr5:29796089-29796615	K562	blood:	n/a	n/a
6	ARID3A	chr5:29906116-29906603	HepG2	liver:	n/a	n/a
7	ARID3A	chr5:29702779-29702781	K562	blood:	n/a	n/a
8	ARID3A	chr5:29758987-29759854	HepG2	liver:	n/a	n/a
9	ATF1	chr5:29866502-29866522	K562	blood:	n/a	n/a
10	ATF1	chr5:29723642-29723783	K562	blood:	n/a	n/a
11	BACH1	chr5:29759069-29759443	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr5:29796249-29796518	K562	blood:	n/a	n/a
13	BCL3	chr5:29780524-29781081	A549	lung:	n/a	chr5:29780975-29780982
14	BCL3	chr5:29780371-29781105	A549	lung:	n/a	chr5:29780975-29780982
15	BHLHE40	chr5:29796156-29796515	K562	blood:	n/a	n/a
16	BRCA1	chr5:29854000-29854275	Hela-S3	cervix:	n/a	n/a
17	BRCA1	chr5:29587962-29588174	Hela-S3	cervix:	n/a	n/a
18	CBX3	chr5:29796135-29796512	K562	blood:	n/a	n/a
19	CBX3	chr5:29796149-29796424	K562	blood:	n/a	n/a
20	CCNT2	chr5:29568109-29568475	K562	blood:	n/a	n/a
21	CCNT2	chr5:29796027-29796531	K562	blood:	n/a	n/a
22	CCNT2	chr5:29862067-29862267	K562	blood:	n/a	n/a
23	CEBPB	chr5:29800776-29801151	HepG2	liver:	n/a	chr5:29800957-29800968
24	CEBPB	chr5:29867305-29867513	A549	lung:	n/a	chr5:29867438-29867449 chr5:29867457-29867468
25	CEBPB	chr5:29745744-29746011	K562	blood:	n/a	chr5:29745873-29745884 chr5:29745875-29745884 chr5:29745875-29745886
26	CEBPB	chr5:29800824-29801137	A549	lung:	n/a	chr5:29800957-29800968
27	CEBPB	chr5:29614349-29614730	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr5:29896675-29897113	MCF-7	breast:	n/a	chr5:29896946-29896957
29	CEBPB	chr5:29800755-29801131	HepG2	liver:	n/a	chr5:29800957-29800968
30	CEBPB	chr5:29896808-29897108	HepG2	liver:	n/a	chr5:29896946-29896957
31	CEBPB	chr5:29845323-29845707	K562	blood:	n/a	chr5:29845507-29845518 chr5:29845508-29845517 chr5:29845506-29845519 chr5:29845508-29845517 chr5:29845506-29845519 chr5:29845506-29845519 chr5:29845508-29845517 chr5:29845508-29845517 chr5:29845506-29845517
32	CEBPB	chr5:29597920-29598079	HepG2	liver:	n/a	n/a
33	CEBPB	chr5:29778967-29779246	A549	lung:	n/a	n/a
34	CEBPB	chr5:29845327-29845686	HepG2	liver:	n/a	chr5:29845507-29845518 chr5:29845508-29845517 chr5:29845506-29845519 chr5:29845508-29845517 chr5:29845506-29845519 chr5:29845506-29845519 chr5:29845508-29845517 chr5:29845508-29845517 chr5:29845506-29845517
35	CEBPB	chr5:29890275-29890475	HepG2	liver:	n/a	n/a
36	CEBPB	chr5:29800832-29801015	H1-hESC	embryonic stem cell:	n/a	chr5:29800957-29800968
37	CEBPB	chr5:29816427-29816571	K562	blood:	n/a	chr5:29816477-29816488
38	CEBPB	chr5:29867384-29867549	K562	blood:	n/a	chr5:29867438-29867449 chr5:29867457-29867468
39	CEBPB	chr5:29871231-29871474	H1-hESC	embryonic stem cell:	n/a	chr5:29871365-29871376
40	CEBPB	chr5:29896757-29897147	Hela-S3	cervix:	n/a	chr5:29896946-29896957
41	CEBPB	chr5:29871187-29871525	HepG2	liver:	n/a	chr5:29871365-29871376
42	CEBPB	chr5:29896813-29897077	A549	lung:	n/a	chr5:29896946-29896957
43	CEBPB	chr5:29778929-29779212	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr5:29896727-29897079	MCF-7	breast:	n/a	chr5:29896946-29896957
45	CEBPB	chr5:29820724-29820865	K562	blood:	n/a	n/a
46	CEBPB	chr5:29779026-29779228	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr5:29796077-29796461	K562	blood:	n/a	n/a
48	CEBPB	chr5:29729582-29729864	MCF-7	breast:	n/a	n/a
49	CEBPB	chr5:29778931-29779217	IMR90	lung:	n/a	n/a
50	CEBPB	chr5:29785594-29785960	Hela-S3	cervix:	n/a	n/a

No data

(count:67 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr5:29367229..29368191-chr5:29697633..29698544,4	MCF-7	breast:
2	chr5:29785498..29787507-chr5:29789131..29791399,2	MCF-7	breast:
3	chr5:29693881..29696199-chr5:29698670..29700812,2	K562	blood:
4	chr5:29779299..29782014-chr5:29783552..29785289,2	K562	blood:
5	chr5:29694176..29695942-chr5:29696440..29698391,2	MCF-7	breast:
6	chr5:29721879..29723943-chr5:29725027..29727979,2	K562	blood:
7	chr5:29721152..29723943-chr5:29726396..29727979,2	K562	blood:
8	chr5:29817885..29819538-chr5:29819853..29822420,2	K562	blood:
9	chr5:29805693..29809011-chr5:29809552..29813804,3	MCF-7	breast:
10	chr5:29734347..29737280-chr5:29739042..29740849,2	MCF-7	breast:
11	chr5:29690755..29693202-chr5:29696667..29699518,2	MCF-7	breast:
12	chr5:29774989..29777167-chr5:29780258..29781874,2	MCF-7	breast:
13	chr5:29779299..29782014-chr5:29783552..29785289,2	K562	blood:
14	chr5:29852340..29854743-chr5:29859491..29862426,2	MCF-7	breast:
15	chr5:29802968..29807767-chr5:29809670..29813095,5	MCF-7	breast:
16	chr5:29615746..29618032-chr5:29623108..29625004,2	K562	blood:
17	chr5:29690755..29693202-chr5:29696667..29699518,2	MCF-7	breast:
18	chr5:29774989..29777167-chr5:29780258..29781874,2	MCF-7	breast:
19	chr5:29720751..29721441-chr5:29812006..29812656,2	MCF-7	breast:
20	chr4:181350073..181352059-chr5:29762233..29764064,2	MCF-7	breast:
21	chr5:29192802..29195589-chr5:29735604..29737359,2	K562	blood:
22	chr5:29802968..29807767-chr5:29809670..29813095,5	MCF-7	breast:
23	chr5:29620035..29622604-chr5:29624083..29625819,2	K562	blood:
24	chr5:29732562..29734284-chr5:29734995..29736841,2	K562	blood:
25	chr5:29895488..29897102-chr5:29897423..29899198,2	K562	blood:
26	chr5:29628564..29631486-chr5:29634106..29636111,2	MCF-7	breast:
27	chr5:29787147..29790106-chr5:29792184..29794445,2	K562	blood:
28	chr15:66795621..66798316-chr5:29839740..29841936,2	MCF-7	breast:
29	chr5:29620035..29622604-chr5:29624083..29625819,2	K562	blood:
30	chr2:119203281..119203921-chr5:29680877..29681838,2	MCF-7	breast:
31	chr5:29623807..29626845-chr5:29627046..29630345,3	MCF-7	breast:
32	chr5:29805693..29809011-chr5:29809552..29813804,3	MCF-7	breast:
33	chr5:29834181..29838118-chr5:29840753..29844381,4	MCF-7	breast:
34	chr5:29628564..29631486-chr5:29634106..29636111,2	MCF-7	breast:
35	chr16:89785981..89788099-chr5:29571782..29574694,2	MCF-7	breast:
36	chr5:29615746..29618032-chr5:29623108..29625004,2	K562	blood:
37	chr5:29729555..29730090-chr5:29750459..29751020,2	MCF-7	breast:
38	chr16:27487589..27488219-chr5:29570534..29571280,2	MCF-7	breast:
39	chr5:29880363..29882592-chr5:29883253..29886010,2	K562	blood:
40	chr5:29721879..29723943-chr5:29725027..29727979,2	K562	blood:
41	chr5:29784571..29787438-chr5:29789979..29792969,3	K562	blood:
42	chr5:29767605..29769973-chr5:29774062..29775613,2	K562	blood:
43	chr5:29623807..29626845-chr5:29627046..29630345,3	MCF-7	breast:
44	chr5:29895488..29897102-chr5:29897423..29899198,2	K562	blood:
45	chr5:29693881..29696199-chr5:29698670..29700812,2	K562	blood:
46	chr5:29880363..29882592-chr5:29883253..29886010,2	K562	blood:
47	chr5:29862751..29864357-chr5:29864690..29866503,2	MCF-7	breast:
48	chr5:29852340..29854743-chr5:29859491..29862426,2	MCF-7	breast:
49	chr5:29367263..29368784-chr5:29811787..29812627,6	MCF-7	breast:
50	chr5:29721152..29723943-chr5:29726396..29727979,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DROSHA-10	chr5:29881816-29883052	NONHSAT100866
2	lnc-DROSHA-11	chr5:29848791-29849325	NONHSAT100865
3	lnc-CDH6-8	chr5:29796045-29796375	NONHSAT100864

No data

Variant related genes	Relation type
ENSG00000249744	TF binding region
ENSG00000250984	TF binding region
UBL5P1	TF binding region
ENSG00000233787	TF binding region
ENSG00000174442	chromatin interactions
ENSG00000200623	chromatin interactions
ENSG00000174444	chromatin interactions
ENSG00000075399	chromatin interactions
ENSG00000158805	chromatin interactions
ENSG00000077235	chromatin interactions

Extended variants
information (count: 3591 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:3591 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs530586101	chr5:29548614-29548615	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs143790950	chr5:29548617-29548618	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs563978913	chr5:29548618-29548619	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs146835757	chr5:29548626-29548627	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs576352371	chr5:29548627-29548628	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs179315	chr5:29548628-29548629	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs564230731	chr5:29548642-29548643	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs548797336	chr5:29548662-29548663	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs367820613	chr5:29548663-29548664	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs189357415	chr5:29548664-29548665	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs570335378	chr5:29548729-29548730	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs369456408	chr5:29548750-29548751	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs559149122	chr5:29548754-29548755	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs677617	chr5:29548771-29548772	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs534825296	chr5:29548782-29548783	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs552926883	chr5:29548785-29548786	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs115434846	chr5:29548793-29548794	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs541838722	chr5:29548799-29548800	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs618636	chr5:29548848-29548849	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs575498779	chr5:29548860-29548861	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs545677752	chr5:29548877-29548878	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs564349066	chr5:29548897-29548898	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs549762098	chr5:29548935-29548936	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs528182601	chr5:29548948-29548949	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs34112243	chr5:29548954-29548955	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs546748063	chr5:29548963-29548964	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs369206628	chr5:29548967-29548968	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs553051015	chr5:29548968-29548969	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs533122999	chr5:29548994-29548995	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs561780492	chr5:29549008-29549009	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs2021437	chr5:29549038-29549039	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs566608435	chr5:29549043-29549044	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs185600719	chr5:29549048-29549049	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs555112704	chr5:29549049-29549050	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs537223900	chr5:29549051-29549052	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs148851795	chr5:29549057-29549058	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs190126877	chr5:29549069-29549070	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs571052436	chr5:29549087-29549088	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs181664253	chr5:29549091-29549092	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs201318030	chr5:29549119-29549120	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs788577	chr5:29549125-29549126	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs115543821	chr5:29549165-29549166	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs143484391	chr5:29549179-29549180	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs185791922	chr5:29549230-29549231	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs575442298	chr5:29549265-29549266	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs370776472	chr5:29549285-29549286	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs557647844	chr5:29549291-29549292	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs573047802	chr5:29549298-29549299	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs568881481	chr5:29549320-29549321	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs371301776	chr5:29549324-29549325	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Cervical squamous cell carcinoma	21590768	CNVD
Non-small cell lung cancer	20864512	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	16783165	CNVD
Thyroid cancer	19087340	CNVD
Liposarcoma	21253554	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Cervical Cancer	21857958	CNVD
Cervical cancer	21062161	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Ewing''s sarcoma	17952124	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Cervical cancer	18559093	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Colorectal cancer	21645411	CNVD
Gastric cancer	22152101	CNVD
Oesophago-gastric ulcer	22152101	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Multiple myeloma	17550852	CNVD
prenatal diagnosis	22389664	CNVD
Bladder cancer	21909424	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Breast cancer	21785460	CNVD
Spinal muscular atrophy	22422766	CNVD
Spinal muscular atrophy	22558076	CNVD
Spinal muscular atrophy	21320981	CNVD
Spinal muscular atrophy	21762474	CNVD
Breast cancer	21858162	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Cancer	16751803	CNVD
Breast cancer	16608533	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Intellectual disability	22102821	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	17603634	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Non-small cell lung cancer	19010865	CNVD
Glioblastoma multiforme	22286061	CNVD
Compulsive disorder	18923513	CNVD
Epilepsy	18923513	CNVD
Prader-willi syndrome	18923513	CNVD
small cell lung cancer	20016488	CNVD
Ovarian cancer	21720365	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Glioma	20126413	CNVD
Non-small cell lung cancer	21829676	CNVD
Breast cancer	22032731	CNVD
Esophageal cancer	20955586	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21364760	CNVD
Breast cancer	20409316	CNVD
Medulloblastoma	19270706	CNVD
Breast cancer	19553991	CNVD
Lung cancer	19553991	CNVD
Melanoma	19553991	CNVD
Ovarian cancer	19553991	CNVD
Prostate cancer	19553991	CNVD
Non-small cell lung cancer	17156491	CNVD
Breast cancer	17133270	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	18923514	CNVD
Schizophrenia	22241247	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Williams Syndrome	20824207	CNVD

Chromatin state (count:130 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:29546400-29548800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr5:29548200-29550000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr5:29549800-29550200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr5:29566800-29567200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr5:29567000-29567200	Enhancers	Primary hematopoietic stem cells	blood
6	chr5:29567000-29568200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr5:29567200-29567600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr5:29567400-29568400	Weak transcription	Primary hematopoietic stem cells	blood
9	chr5:29567600-29569800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr5:29568200-29568800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr5:29568400-29568800	Enhancers	Primary hematopoietic stem cells	blood
12	chr5:29568800-29569200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr5:29569200-29569400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr5:29569400-29570200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr5:29569800-29570800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr5:29570200-29571200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr5:29570800-29572400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr5:29571200-29571400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr5:29571400-29571600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr5:29571600-29571800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr5:29571800-29572000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr5:29572000-29572200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr5:29587200-29589400	Enhancers	Hela-S3	cervix
24	chr5:29602800-29603600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
25	chr5:29613600-29614200	Enhancers	Hela-S3	cervix
26	chr5:29614200-29614600	Weak transcription	Hela-S3	cervix
27	chr5:29614600-29615200	Enhancers	Hela-S3	cervix
28	chr5:29633400-29634000	Enhancers	iPS-20b Cell Line	embryonic stem cell
29	chr5:29633400-29634200	Enhancers	iPS-18 Cell Line	embryonic stem cell
30	chr5:29634800-29635400	Enhancers	Brain Hippocampus Middle	brain
31	chr5:29635000-29635200	Enhancers	Brain Substantia Nigra	brain
32	chr5:29635200-29635600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr5:29697400-29698400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr5:29705800-29706200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr5:29706000-29707200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr5:29706200-29706600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr5:29706600-29708000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr5:29744400-29745000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr5:29751400-29751800	Enhancers	Fetal Intestine Small	intestine
40	chr5:29758600-29759000	Enhancers	HepG2	liver
41	chr5:29759000-29759200	Active TSS	Liver	Liver
42	chr5:29759000-29759200	Flanking Active TSS	HepG2	liver
43	chr5:29759000-29759600	Enhancers	Fetal Intestine Large	intestine
44	chr5:29759000-29759600	Active TSS	A549	lung
45	chr5:29759200-29759400	Flanking Active TSS	Liver	Liver
46	chr5:29759200-29759600	Enhancers	Fetal Intestine Small	intestine
47	chr5:29759200-29759600	Active TSS	HepG2	liver
48	chr5:29759600-29760000	Weak transcription	Fetal Intestine Large	intestine
49	chr5:29759600-29761200	Enhancers	HepG2	liver
50	chr5:29760200-29760400	Enhancers	Fetal Intestine Large	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links