Variant report

Variant	esv3387284
Chromosome Location	chr11:102612817-102616090
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 89 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:89 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs569857802	chr11:102612823-102612824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs535233504	chr11:102612834-102612835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs555135031	chr11:102612841-102612842	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs374729807	chr11:102612846-102612847	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs367990846	chr11:102612852-102612853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs12295216	chr11:102612877-102612878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs11827130	chr11:102612878-102612879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs577140412	chr11:102612916-102612917	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs368022534	chr11:102612924-102612925	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs201999535	chr11:102612948-102612949	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs11518491	chr11:102612994-102612995	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs542589929	chr11:102613012-102613013	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs542652706	chr11:102613037-102613038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs527920545	chr11:102613111-102613112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs541096223	chr11:102613119-102613120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs564050677	chr11:102613158-102613159	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs370632363	chr11:102613166-102613167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs149091620	chr11:102613245-102613246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs190380748	chr11:102613256-102613257	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs569674217	chr11:102613259-102613260	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs11512688	chr11:102613285-102613286	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs374388090	chr11:102613344-102613345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs368369342	chr11:102613347-102613348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs372382984	chr11:102613361-102613362	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs12789176	chr11:102613427-102613428	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs111639978	chr11:102613473-102613474	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs9736850	chr11:102613476-102613477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs565523244	chr11:102613485-102613486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs375791660	chr11:102613486-102613487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs11512689	chr11:102613489-102613490	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs547823436	chr11:102613501-102613502	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs11560898	chr11:102613644-102613645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs375070543	chr11:102613749-102613750	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs201071169	chr11:102613951-102613952	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs61895563	chr11:102614049-102614050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs202018166	chr11:102614066-102614067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs200152135	chr11:102614109-102614110	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs202173915	chr11:102614119-102614120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs374598001	chr11:102614135-102614136	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs113335339	chr11:102614154-102614155	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs370147437	chr11:102614175-102614176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs143087213	chr11:102614202-102614203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs374101124	chr11:102614247-102614248	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs11560899	chr11:102614589-102614590	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs371392291	chr11:102614607-102614608	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs113787764	chr11:102614683-102614684	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs556144959	chr11:102614763-102614764	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs537881470	chr11:102614885-102614886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs71626169	chr11:102614901-102614902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs375678052	chr11:102615067-102615068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Melanoma	22183965	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Multiple myeloma	16616336	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	16912164	CNVD
Ovarian cancer	21720365	CNVD
Melanoma	17363583	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Melanoma	20877625	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102604600-102620000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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