Variant report

Variant	esv3388213
Chromosome Location	chr16:30200951-30234449
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1149)
CpG islands
(count:305)
Chromatin interactive
region (count:1)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1149 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr16:30204418-30205489	GM12878	blood:	n/a	n/a
2	BATF	chr16:30221859-30222069	GM12878	blood:	n/a	n/a
3	BATF	chr16:30234250-30234751	GM12878	blood:	n/a	n/a
4	BCL11A	chr16:30203419-30203820	GM12878	blood:	n/a	n/a
5	BCL11A	chr16:30234244-30234770	GM12878	blood:	n/a	n/a
6	BCL11A	chr16:30203933-30205250	GM12878	blood:	n/a	n/a
7	BCL11A	chr16:30204786-30205053	GM12878	blood:	n/a	n/a
8	BCL11A	chr16:30202309-30202711	GM12878	blood:	n/a	n/a
9	BCL11A	chr16:30234236-30234783	GM12878	blood:	n/a	n/a
10	BCL11A	chr16:30221855-30222106	GM12878	blood:	n/a	n/a
11	BHLHE40	chr16:30221810-30222099	HepG2	liver:	n/a	n/a
12	BHLHE40	chr16:30210902-30211673	HepG2	liver:	n/a	n/a
13	BHLHE40	chr16:30205607-30205898	HepG2	liver:	n/a	n/a
14	BHLHE40	chr16:30204722-30205224	HepG2	liver:	n/a	n/a
15	BHLHE40	chr16:30218877-30219112	HepG2	liver:	n/a	n/a
16	BHLHE40	chr16:30204184-30204453	HepG2	liver:	n/a	n/a
17	BHLHE40	chr16:30219470-30219887	HepG2	liver:	n/a	n/a
18	CBX3	chr16:30204132-30205858	K562	blood:	n/a	n/a
19	CBX3	chr16:30204785-30205411	K562	blood:	n/a	n/a
20	CBX3	chr16:30210416-30211329	K562	blood:	n/a	n/a
21	CBX3	chr16:30221745-30222217	K562	blood:	n/a	n/a
22	CEBPB	chr16:30211021-30211237	K562	blood:	n/a	n/a
23	CEBPB	chr16:30208339-30208523	HepG2	liver:	n/a	chr16:30208477-30208486 chr16:30208475-30208488
24	CEBPB	chr16:30204902-30205208	GM12878	blood:	n/a	chr16:30205120-30205128
25	CEBPB	chr16:30208329-30208542	HepG2	liver:	n/a	chr16:30208477-30208486 chr16:30208475-30208488
26	CEBPB	chr16:30210926-30211366	K562	blood:	n/a	n/a
27	CEBPD	chr16:30204844-30205542	K562	blood:	n/a	n/a
28	CTCF	chr16:30221864-30222078	GM12892	blood:	n/a	n/a
29	CTCF	chr16:30218744-30218893	Medullo	brain:	n/a	chr16:30218793-30218811 chr16:30218788-30218809 chr16:30218864-30218877
30	CTCF	chr16:30218769-30218849	ProgFib	skin:	n/a	chr16:30218793-30218811 chr16:30218788-30218809
31	CTCF	chr16:30221864-30222071	HUVEC	blood vessel:	n/a	n/a
32	CTCF	chr16:30204499-30204688	MCF-7	breast:	n/a	n/a
33	CTCF	chr16:30204223-30204245	GM10266	blood:	n/a	n/a
34	CTCF	chr16:30204435-30204754	GM12878	blood:	n/a	n/a
35	CTCF	chr16:30218628-30218968	A549	lung:	n/a	chr16:30218793-30218811 chr16:30218788-30218809 chr16:30218864-30218877
36	CTCF	chr16:30204500-30204673	Medullo	brain:	n/a	n/a
37	CTCF	chr16:30204488-30204705	GM13977	blood:	n/a	n/a
38	CTCF	chr16:30208343-30208476	MCF-7	breast:	n/a	n/a
39	CTCF	chr16:30204454-30204694	GM10266	blood:	n/a	n/a
40	CTCF	chr16:30208345-30208461	Hela-S3	cervix:	n/a	n/a
41	CTCF	chr16:30221859-30222047	GM10248	blood:	n/a	n/a
42	CTCF	chr16:30220491-30220658	MCF-7	breast:	n/a	chr16:30220530-30220539
43	CTCF	chr16:30222386-30222404	GM13976	blood:	n/a	n/a
44	CTCF	chr16:30220592-30220609	MCF-7	breast:	n/a	n/a
45	CTCF	chr16:30210589-30210638	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr16:30204427-30204718	A549	lung:	n/a	n/a
47	CTCF	chr16:30221829-30222068	GM10266	blood:	n/a	n/a
48	CTCF	chr16:30221722-30222103	K562	blood:	n/a	n/a
49	CTCF	chr16:30221864-30222063	GM13976	blood:	n/a	n/a
50	CTCF	chr16:30204304-30204373	GM19240	blood:	n/a	n/a

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:30209202-30209252	NT2-D1	testis:	n/a
2	chr16:30206046-30206096	HRCEpiC	kidney:	n/a
3	chr16:30206046-30206096	ECC-1	luminal epithelium:	n/a
4	chr16:30217452-30217502	Hepatocyte	liver:	n/a
5	chr16:30206046-30206096	NT2-D1	testis:	n/a
6	chr16:30217452-30217502	HCPEpiC	choroid plexus:	n/a
7	chr16:30217452-30217502	SK-N-MC	brain:	n/a
8	chr16:30206073-30206123	HNPCEpiC	eye:	n/a
9	chr16:30206076-30206126	BE2_C	brain:	n/a
10	chr16:30206076-30206126	HRCEpiC	kidney:	n/a
11	chr16:30206046-30206096	PrEC	prostate:	n/a
12	chr16:30206076-30206126	PFSK-1	brain:	n/a
13	chr16:30206073-30206123	SKMC	muscle:	n/a
14	chr16:30209202-30209252	GM12891	blood:	n/a
15	chr16:30206073-30206123	HAEpiC	amniotic membrane:	n/a
16	chr16:30206073-30206123	H1-hESC	embryonic stem cell:	embryo
17	chr16:30206073-30206123	NH-A	brain:	n/a
18	chr16:30206076-30206126	HUVEC	blood vessel:	n/a
19	chr16:30206073-30206123	LNCaP	prostate:	n/a
20	chr16:30206046-30206096	HMEC	breast:	n/a
21	chr16:30209202-30209252	BE2_C	brain:	n/a
22	chr16:30206076-30206126	HepG2	liver:	n/a
23	chr16:30206076-30206126	HEEpiC	esophagus:	n/a
24	chr16:30209202-30209252	Hepatocyte	liver:	n/a
25	chr16:30209202-30209252	GM12892	blood:	n/a
26	chr16:30206076-30206126	PANC-1	pancreas:	n/a
27	chr16:30206046-30206096	HCF	heart:	n/a
28	chr16:30206046-30206096	AG09319	gingival:	n/a
29	chr16:30217452-30217502	GM06990	blood:	n/a
30	chr16:30206046-30206096	PANC-1	pancreas:	n/a
31	chr16:30206073-30206123	PFSK-1	brain:	n/a
32	chr16:30206046-30206096	HepG2	liver:	n/a
33	chr16:30206073-30206123	BJ	skin:	n/a
34	chr16:30217452-30217502	LNCaP	prostate:	n/a
35	chr16:30209202-30209252	HCF	heart:	n/a
36	chr16:30206073-30206123	Hela-S3	cervix:	n/a
37	chr16:30209202-30209252	HUVEC	blood vessel:	n/a
38	chr16:30217452-30217502	HepG2	liver:	n/a
39	chr16:30206076-30206126	SAEC	small airway:	n/a
40	chr16:30206076-30206126	PrEC	prostate:	n/a
41	chr16:30217452-30217502	H1-hESC	embryonic stem cell:	embryo
42	chr16:30206073-30206123	GM12878	blood:	n/a
43	chr16:30209202-30209252	SK-N-SH_RA	brain:	n/a
44	chr16:30206046-30206096	HCM	heart:	n/a
45	chr16:30206076-30206126	IMR90	lung:	fetal
46	chr16:30206076-30206126	AG04450	lung:	fetal
47	chr16:30209202-30209252	AG09319	gingival:	n/a
48	chr16:30206076-30206126	ovcar-3	ovarian:	n/a
49	chr16:30206046-30206096	IMR90	lung:	fetal
50	chr16:30206046-30206096	GM12892	blood:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:30196751..30201052-chr16:30379113..30382636,3	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BOLA2B-2	chr16:30216282-30216411	NONHSAT141724
2	lnc-SULT1A3.1-2	chr16:30225730-30225759	NONHSAT141727
3	lnc-SULT1A3.1-1	chr16:30207633-30208678	NONHSAT141720
4	lnc-SULT1A3.1-1	chr16:30208758-30208851	NONHSAT141720
5	lnc-SULT1A3.1-1	chr16:30208591-30208724	NONHSAT141721
6	lnc-SULT1A3.1-1	chr16:30207979-30208422	NONHSAT141721
7	lnc-SULT1A3.1-1	chr16:30214329-30214825	NONHSAT141723
8	lnc-BOLA2B-2	chr16:30218197-30218221	NONHSAT141726
9	lnc-BOLA2B-2	chr16:30216148-30216211	NONHSAT141724
10	lnc-BOLA2B-2	chr16:30217575-30218248	NONHSAT141724
11	lnc-BOLA2B-2	chr16:30217246-30217485	NONHSAT141724
12	lnc-SULT1A3.1-2	chr16:30225841-30226020	NONHSAT141727
13	lnc-BOLA2B-2	chr16:30215638-30216007	NONHSAT141724
14	lnc-BOLA2B-2	chr16:30219849-30220392	NONHSAT141726

No data

Variant related genes	Relation type
BOLA2B	TF binding region
ENSG00000258130	TF binding region
SULT1A3	TF binding region
ENSG00000261203	TF binding region
ENSG00000261416	TF binding region
SLX1A	TF binding region
ENSG00000261444	TF binding region
SLX1A-SULT1A3	TF binding region
BOLA2B	CpG island
ENSG00000258130	CpG island
SULT1A3	CpG island
ENSG00000261203	CpG island
ENSG00000261416	CpG island
SLX1A	CpG island
ENSG00000261444	CpG island
SLX1A-SULT1A3	CpG island
ENSG00000169221	chromatin interactions
ENSG00000180209	chromatin interactions

Extended variants
information (count: 101 )
Associated
traits (count: 125 )

Variant overlapped rSNPs/rCNVs (count:101 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4016848	chr16:30201416-30201417	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
2	rs60381870	chr16:30201418-30201419	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
3	rs56016613	chr16:30201439-30201440	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
4	rs2370571	chr16:30201441-30201442	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
5	rs61393864	chr16:30201447-30201448	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
6	rs191380664	chr16:30201457-30201458	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
7	rs183817463	chr16:30201493-30201494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs556850233	chr16:30201622-30201623	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs559559443	chr16:30201641-30201642	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs533307430	chr16:30201643-30201644	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs112060639	chr16:30201726-30201727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs2370570	chr16:30201727-30201728	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs368327027	chr16:30201728-30201729	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs201064502	chr16:30201732-30201733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs3061848	chr16:30201733-30201734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs545220785	chr16:30202664-30202665	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
17	rs369491207	chr16:30202685-30202686	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
18	rs563503585	chr16:30202736-30202737	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
19	rs531009886	chr16:30202754-30202755	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
20	rs77721029	chr16:30202929-30202930	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
21	rs549421742	chr16:30206075-30206076	Flanking Active TSS Active TSS Weak transcription Enhancers	TF binding region CpG island	4 gene(s)	Overlapped CNVs	n/a
22	rs567675067	chr16:30206264-30206265	Weak transcription	TF binding region	4 gene(s)	Overlapped CNVs	n/a
23	rs528438250	chr16:30206319-30206320	Weak transcription	TF binding region	4 gene(s)	Overlapped CNVs	n/a
24	rs142135049	chr16:30206826-30206827	Weak transcription	TF binding region	4 gene(s)	Overlapped CNVs	n/a
25	rs368276461	chr16:30207618-30207619	Weak transcription	TF binding region	3 gene(s)	Overlapped CNVs	n/a
26	rs112165087	chr16:30207777-30207778	Weak transcription	TF binding region lncRNA	3 gene(s)	Overlapped CNVs	n/a
27	rs546685565	chr16:30208213-30208214	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
28	rs571596876	chr16:30208320-30208321	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
29	rs561116066	chr16:30208338-30208339	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
30	rs538991046	chr16:30208518-30208519	Weak transcription Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
31	rs2304623	chr16:30208521-30208522	Weak transcription Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
32	rs45583938	chr16:30208527-30208528	Weak transcription Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
33	rs557119859	chr16:30208550-30208551	Weak transcription Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
34	rs199857631	chr16:30208575-30208576	Weak transcription Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
35	rs201044062	chr16:30208618-30208619	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
36	rs202214781	chr16:30208629-30208630	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
37	rs142024916	chr16:30208637-30208638	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
38	rs569077618	chr16:30208697-30208698	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
39	rs536470602	chr16:30208762-30208763	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
40	rs555395758	chr16:30208814-30208815	Weak transcription	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
41	rs368887437	chr16:30208958-30208959	Weak transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
42	rs80224469	chr16:30209233-30209234	Weak transcription	TF binding region CpG island	2 gene(s)	Overlapped CNVs	n/a
43	rs573665021	chr16:30209237-30209238	Weak transcription	TF binding region CpG island	2 gene(s)	Overlapped CNVs	n/a
44	rs79070527	chr16:30209530-30209531	Weak transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
45	rs541013055	chr16:30211887-30211888	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs371560738	chr16:30211957-30211958	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs151163643	chr16:30211975-30211976	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs553050853	chr16:30212101-30212102	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs577982762	chr16:30212223-30212224	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs545355986	chr16:30212542-30212543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:125)

Disease	PMID	Source
Hodgkin''s lymphoma	20651079	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	18172304	CNVD
Breast cancer	16608533	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Autism	22566537	CNVD
Intellectual disability	22566537	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Lung cancer	18438408	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21509527	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Mental retardation	19951919	CNVD
Colorectal cancer	16272173	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Bladder cancer	21909424	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Myelofibrosis	22110671	CNVD
Epilepsy	22499536	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Austim spectrum disorder	21302340	CNVD
Autism	22513405	CNVD
Autism	22958593	CNVD
Autism	18184952	CNVD
Autism	19966786	CNVD
Autism	21394203	CNVD
Autism	21969575	CNVD
Autism	22241247	CNVD
Autism	20970697	CNVD
Autism	20942916	CNVD
Epilepsy	20970697	CNVD
Intellectual disability	22045946	CNVD
Mental retardation	19966786	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Autism	18923514	CNVD
Obesity	21881559	CNVD
Obesity	21956041	CNVD
Autism	20659124	CNVD
Mental retardation	21062444	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	22885689	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	20970697	CNVD
Schizophrenia	20433910	CNVD
Schizophrenia	22241247	CNVD
Autism	19242545	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Intracranial ependymoma	16609018	CNVD
Schizophrenia	21399695	CNVD
Autism	21956041	CNVD
Disorders of sex development	21048976	CNVD
Autism	22067053	CNVD
Autism	18156158	CNVD
Mental retardation	20152051	CNVD
Autism	19218893	CNVD
Autism	21289514	CNVD
Schizophrenia	19855392	CNVD
neurodevelopmental Syndrome	20503337	CNVD
Benign familial neonatal-infantile seizures	21060786	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Cancer	21183584	CNVD
Low-grade fibromyxoid sarcoma	21536545	CNVD
Breast cancer	21045282	CNVD
Neuroblastoma	20406844	CNVD
Autism	19050728	CNVD
Epilepsy	20923578	CNVD
Psychiatric disorder	19050728	CNVD
Schizophrenia	19348701	CNVD
Attention deficit hyperactivity disorder	19097825	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Breast cancer	20409316	CNVD
Severe combined immunodeficiency	19097825	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Autism	18522746	CNVD
Urothelial carcinoma	21177765	CNVD
Chronic myeloid leukemia	21384125	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Prostate cancer	18632612	CNVD
Schizophrenia	21346763	CNVD
autism	21731881	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Schizophrenia	23813976	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:292 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:30195000-30205800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr16:30196000-30205800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr16:30196200-30201000	Weak transcription	NHEK	skin
4	chr16:30196400-30205800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr16:30196400-30205800	Weak transcription	Brain Substantia Nigra	brain
6	chr16:30196400-30205800	Weak transcription	Right Atrium	heart
7	chr16:30197200-30205800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr16:30197200-30205800	Weak transcription	Brain Anterior Caudate	brain
9	chr16:30197400-30201400	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr16:30198800-30201600	Weak transcription	Rectal Smooth Muscle	rectum
11	chr16:30199000-30205800	Weak transcription	Liver	Liver
12	chr16:30199000-30205800	Weak transcription	Brain Angular Gyrus	brain
13	chr16:30199000-30205800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr16:30199000-30205800	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr16:30199000-30205800	Weak transcription	Fetal Intestine Large	intestine
16	chr16:30199000-30205800	Weak transcription	Fetal Muscle Trunk	muscle
17	chr16:30199000-30205800	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr16:30199600-30201800	Weak transcription	Primary hematopoietic stem cells	blood
19	chr16:30199600-30205800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr16:30199600-30205800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr16:30199600-30205800	Weak transcription	Esophagus	oesophagus
22	chr16:30199600-30205800	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr16:30199600-30205800	Weak transcription	NHLF	lung
24	chr16:30199800-30201000	Weak transcription	GM12878-XiMat	blood
25	chr16:30199800-30201200	Weak transcription	Primary T cells from cord blood	blood
26	chr16:30199800-30201200	Weak transcription	Primary T helper cells PMA-I stimulated	--
27	chr16:30199800-30201400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
28	chr16:30199800-30201400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
29	chr16:30199800-30201800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr16:30199800-30201800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
31	chr16:30199800-30202000	Weak transcription	Gastric	stomach
32	chr16:30199800-30202600	Weak transcription	Thymus	Thymus
33	chr16:30199800-30203200	Weak transcription	Sigmoid Colon	Sigmoid Colon
34	chr16:30199800-30205800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr16:30199800-30205800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr16:30199800-30205800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr16:30199800-30205800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
38	chr16:30199800-30205800	Weak transcription	Primary B cells from peripheral blood	blood
39	chr16:30199800-30205800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
40	chr16:30199800-30205800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
41	chr16:30199800-30205800	Weak transcription	Primary T helper cells fromperipheralblood	blood
42	chr16:30199800-30205800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr16:30199800-30205800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr16:30199800-30205800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr16:30199800-30205800	Weak transcription	Muscle Satellite Cultured Cells	--
46	chr16:30199800-30205800	Weak transcription	Cortex derived primary cultured neurospheres	brain
47	chr16:30199800-30205800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr16:30199800-30205800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr16:30199800-30205800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr16:30199800-30205800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links