Variant report

Variant	esv3389071
Chromosome Location	chr3:196042555-196045453
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:586)
CpG islands
(count:610)
Chromatin interactive
region (count:21)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:586 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:196045131-196045281	K562	blood:	n/a	n/a
2	ARID3A	chr3:196044868-196045005	HepG2	liver:	n/a	chr3:196044911-196044926
3	ATF1	chr3:196045048-196045429	K562	blood:	n/a	n/a
4	ATF2	chr3:196045027-196045420	GM12878	blood:	n/a	n/a
5	ATF3	chr3:196045000-196045380	K562	blood:	n/a	n/a
6	ATF3	chr3:196045004-196045333	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr3:196044982-196045321	HepG2	liver:	n/a	n/a
8	ATF3	chr3:196045007-196045237	GM12878	blood:	n/a	n/a
9	ATF3	chr3:196044913-196045235	A549	lung:	n/a	n/a
10	BACH1	chr3:196044422-196044653	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr3:196045139-196045376	H1-hESC	embryonic stem cell:	n/a	n/a
12	BATF	chr3:196043609-196044354	GM12878	blood:	n/a	n/a
13	BCL11A	chr3:196043957-196044390	GM12878	blood:	n/a	n/a
14	BCL3	chr3:196044726-196045192	A549	lung:	n/a	chr3:196044851-196044860
15	BCL3	chr3:196044293-196045431	A549	lung:	n/a	chr3:196044851-196044860 chr3:196044658-196044667
16	BCLAF1	chr3:196044834-196045494	GM12878	blood:	n/a	chr3:196044851-196044860
17	BHLHE40	chr3:196044374-196044680	K562	blood:	n/a	n/a
18	BHLHE40	chr3:196044478-196045374	GM12878	blood:	n/a	chr3:196045077-196045093 chr3:196044716-196044732
19	BHLHE40	chr3:196044896-196045345	HepG2	liver:	n/a	chr3:196045077-196045093
20	BHLHE40	chr3:196044955-196045363	K562	blood:	n/a	chr3:196045077-196045093
21	BRCA1	chr3:196044959-196045172	H1-hESC	embryonic stem cell:	n/a	n/a
22	BRCA1	chr3:196044944-196045175	GM12878	blood:	n/a	n/a
23	BRCA1	chr3:196044960-196045411	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr3:196044872-196045284	HepG2	liver:	n/a	n/a
25	BRCA1	chr3:196044567-196044584	Hela-S3	cervix:	n/a	n/a
26	CBX3	chr3:196043572-196044710	K562	blood:	n/a	n/a
27	CBX3	chr3:196044763-196045493	K562	blood:	n/a	n/a
28	CBX3	chr3:196045091-196045354	K562	blood:	n/a	n/a
29	CCNT2	chr3:196044452-196045489	K562	blood:	n/a	n/a
30	CEBPB	chr3:196044895-196045428	Hela-S3	cervix:	n/a	n/a
31	CEBPB	chr3:196044527-196044676	Hela-S3	cervix:	n/a	n/a
32	CEBPD	chr3:196044561-196045432	HepG2	liver:	n/a	n/a
33	CEBPD	chr3:196044825-196045531	K562	blood:	n/a	n/a
34	CHD1	chr3:196044771-196045326	GM12878	blood:	n/a	n/a
35	CHD2	chr3:196044450-196045436	K562	blood:	n/a	n/a
36	CHD2	chr3:196044483-196045332	GM12878	blood:	n/a	n/a
37	CHD2	chr3:196044944-196045326	HepG2	liver:	n/a	n/a
38	CHD2	chr3:196044972-196045335	H1-hESC	embryonic stem cell:	n/a	n/a
39	CHD2	chr3:196044500-196045428	Hela-S3	cervix:	n/a	n/a
40	CREB1	chr3:196044784-196045443	ECC-1	luminal epithelium:	n/a	n/a
41	CREB1	chr3:196044373-196045490	GM12878	blood:	n/a	n/a
42	CREB1	chr3:196044869-196045454	H1-hESC	embryonic stem cell:	n/a	n/a
43	CREB1	chr3:196044325-196045581	K562	blood:	n/a	n/a
44	CREB1	chr3:196044341-196045535	HepG2	liver:	n/a	n/a
45	CREB1	chr3:196044379-196045455	K562	blood:	n/a	n/a
46	CREB1	chr3:196044606-196045423	A549	lung:	n/a	n/a
47	CREB1	chr3:196044792-196045497	H1-hESC	embryonic stem cell:	n/a	n/a
48	CTCF	chr3:196043917-196043983	GM19239	blood:	n/a	n/a
49	CTCF	chr3:196045036-196045262	GM19239	blood:	n/a	chr3:196045184-196045197
50	CTCF	chr3:196045054-196045253	GM12891	blood:	n/a	chr3:196045184-196045197

(count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:196044632-196044682	PANC-1	pancreas:	n/a
2	chr3:196045435-196045485	HL-60	blood:	n/a
3	chr3:196045342-196045392	Hela-S3	cervix:	n/a
4	chr3:196045342-196045392	HCPEpiC	choroid plexus:	n/a
5	chr3:196045335-196045385	ProgFib	skin:	n/a
6	chr3:196045342-196045392	HL-60	blood:	n/a
7	chr3:196045338-196045388	HRPEpiC	eye:	n/a
8	chr3:196044948-196044998	GM19239	blood:	n/a
9	chr3:196045435-196045485	SKMC	muscle:	n/a
10	chr3:196045338-196045388	HL-60	blood:	n/a
11	chr3:196045283-196045333	SK-N-SH	brain:	n/a
12	chr3:196045435-196045485	NB4	blood:	n/a
13	chr3:196045224-196045274	PFSK-1	brain:	n/a
14	chr3:196045435-196045485	PANC-1	pancreas:	n/a
15	chr3:196042855-196042905	SAEC	small airway:	n/a
16	chr3:196045335-196045385	T-47D	breast:	n/a
17	chr3:196045435-196045485	ovcar-3	ovarian:	n/a
18	chr3:196045335-196045385	HRE	kidney:	n/a
19	chr3:196044632-196044682	H1-hESC	embryonic stem cell:	embryo
20	chr3:196045338-196045388	HEK293	kidney:	embryo
21	chr3:196045342-196045392	MCF-7	breast:	n/a
22	chr3:196042855-196042905	NH-A	brain:	n/a
23	chr3:196045435-196045485	A549	lung:	n/a
24	chr3:196045224-196045274	HUVEC	blood vessel:	n/a
25	chr3:196045338-196045388	ProgFib	skin:	n/a
26	chr3:196045222-196045272	HRE	kidney:	n/a
27	chr3:196045335-196045385	NHDF-neo	bronchial:	n/a
28	chr3:196045338-196045388	U87	brain:	n/a
29	chr3:196045435-196045485	AG10803	skin:	n/a
30	chr3:196045222-196045272	MCF-7	breast:	n/a
31	chr3:196044632-196044682	SAEC	small airway:	n/a
32	chr3:196045335-196045385	K562	blood:	n/a
33	chr3:196045335-196045385	SKMC	muscle:	n/a
34	chr3:196045435-196045485	BJ	skin:	n/a
35	chr3:196044948-196044998	SK-N-SH	brain:	n/a
36	chr3:196044948-196044998	HCM	heart:	n/a
37	chr3:196045283-196045333	HIPEpiC	eye:	n/a
38	chr3:196045224-196045274	HRPEpiC	eye:	n/a
39	chr3:196045342-196045392	U87	brain:	n/a
40	chr3:196045338-196045388	HCF	heart:	n/a
41	chr3:196042855-196042905	AG09319	gingival:	n/a
42	chr3:196045222-196045272	HUVEC	blood vessel:	n/a
43	chr3:196045338-196045388	BE2_C	brain:	n/a
44	chr3:196045283-196045333	PANC-1	pancreas:	n/a
45	chr3:196042855-196042905	NT2-D1	testis:	n/a
46	chr3:196045342-196045392	K562	blood:	n/a
47	chr3:196045224-196045274	LNCaP	prostate:	n/a
48	chr3:196045222-196045272	AoSMC	blood vessel:	n/a
49	chr3:196045283-196045333	AG04449	skin:	fetal
50	chr3:196045335-196045385	HRPEpiC	eye:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:196022549..196024808-chr3:196044443..196046676,2	K562	blood:
2	chr3:196043550..196045099-chr3:196157832..196159641,2	MCF-7	breast:
3	chr3:196043730..196046568-chr3:196064807..196067685,4	MCF-7	breast:
4	chr3:196040934..196046683-chr3:196067954..196076269,13	MCF-7	breast:
5	chr3:196038505..196041350-chr3:196041984..196044639,3	K562	blood:
6	chr3:196030106..196032154-chr3:196042449..196045068,2	K562	blood:
7	chr15:63892453..63892996-chr3:196044627..196045171,2	NB4	blood:
8	chr3:196012377..196016502-chr3:196041586..196047553,11	K562	blood:
9	chr3:196035189..196038386-chr3:196041731..196043557,3	K562	blood:
10	chr3:196012669..196015162-chr3:196043820..196046764,2	K562	blood:
11	chr3:196044330..196045109-chr5:44808668..44809542,2	Hela-S3	cervix:
12	chr3:196043702..196046805-chr3:196047566..196053193,12	MCF-7	breast:
13	chr3:196043015..196046706-chr3:196061951..196066451,7	K562	blood:
14	chr3:196044828..196047817-chr3:196050115..196053393,5	K562	blood:
15	chr3:196036607..196038386-chr3:196041731..196043557,2	K562	blood:
16	chr3:196044858..196045747-chrX:48660382..48661281,2	Hela-S3	cervix:
17	chr3:196043128..196045052-chr3:196273376..196275560,2	MCF-7	breast:
18	chr3:196013508..196016403-chr3:196043043..196046288,6	MCF-7	breast:
19	chr3:196043015..196047197-chr3:196061951..196068288,11	K562	blood:
20	chr3:196013567..196017227-chr3:196043342..196045325,4	MCF-7	breast:
21	chr3:196038442..196040771-chr3:196041248..196043484,3	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC069257.9.1-3	chr3:196045221-196045308	ENSG00000235897.1
2	lnc-AC069257.9.1-3	chr3:196045245-196045308	NONHSAT094327
3	lnc-AC069257.9.1-3	chr3:196045277-196045308	ENSG00000235897.1
4	lnc-AC069257.9.1-3	chr3:196045201-196045308	ENSG00000235897.1

No data

Variant related genes	Relation type
TCTEX1D2	TF binding region
TM4SF19-AS1	TF binding region
ENSG00000272741	TF binding region
TCTEX1D2	CpG island
TM4SF19-AS1	CpG island
ENSG00000272741	CpG island
ENSG00000225822	chromatin interactions
ENSG00000212146	chromatin interactions
ENSG00000112996	chromatin interactions
ENSG00000145107	chromatin interactions
ENSG00000163960	chromatin interactions
ENSG00000094631	chromatin interactions
ENSG00000251141	chromatin interactions
ENSG00000213123	chromatin interactions
ENSG00000273331	chromatin interactions
ENSG00000161217	chromatin interactions
ENSG00000259248	chromatin interactions

Extended variants
information (count: 145 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:145 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs538630049	chr3:196042628-196042629	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs372563042	chr3:196042634-196042635	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs186470473	chr3:196042667-196042668	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs190853442	chr3:196042674-196042675	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs528872521	chr3:196042675-196042676	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs181016562	chr3:196042678-196042679	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs371640606	chr3:196042686-196042687	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs539605352	chr3:196042698-196042699	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs558062926	chr3:196042732-196042733	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs570279230	chr3:196042778-196042779	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs537129181	chr3:196042779-196042780	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs60670584	chr3:196042784-196042785	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
13	rs574050598	chr3:196042791-196042792	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs541459359	chr3:196042816-196042817	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs549916562	chr3:196042835-196042836	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs185249195	chr3:196042843-196042844	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs572360636	chr3:196042858-196042859	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs546124807	chr3:196042908-196042909	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs564104117	chr3:196042924-196042925	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs531565762	chr3:196042962-196042963	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs150947676	chr3:196043007-196043008	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs139538330	chr3:196043023-196043024	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
23	rs17851871	chr3:196043052-196043053	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs368038161	chr3:196043102-196043103	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs149665976	chr3:196043103-196043104	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs199821393	chr3:196043132-196043133	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs375155559	chr3:196043133-196043134	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs183355098	chr3:196043145-196043146	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs187833260	chr3:196043189-196043190	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs61388787	chr3:196043218-196043219	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs565380536	chr3:196043222-196043223	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs397702295	chr3:196043224-196043225	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs191903469	chr3:196043250-196043251	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs552080337	chr3:196043259-196043260	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs570135307	chr3:196043290-196043291	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs142061369	chr3:196043345-196043346	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs371235698	chr3:196043434-196043435	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs12488663	chr3:196043445-196043446	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs182715605	chr3:196043477-196043478	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs567769433	chr3:196043558-196043559	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
41	rs535163073	chr3:196043570-196043571	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs538685674	chr3:196043621-196043622	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs578090834	chr3:196043622-196043623	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs554027244	chr3:196043653-196043654	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs545761609	chr3:196043659-196043660	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs138822134	chr3:196043677-196043678	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs371540861	chr3:196043678-196043679	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
48	rs117073433	chr3:196043685-196043686	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
49	rs565872145	chr3:196043751-196043752	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
50	rs138371470	chr3:196043755-196043756	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	21115979	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	16608533	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Breast cancer	17133270	CNVD
Cancer	16751803	CNVD
abnormal development	18461090	CNVD
Autism	19653912	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Prostate cancer	18632612	CNVD
Cervical cancer	21062161	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Austim spectrum disorder	21302340	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	16397240	CNVD
Epilepsy	20736978	CNVD
Mental retardation	20736978	CNVD
speech impairment	20736978	CNVD
Intracranial aneurysm	16715129	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mental retardation	17124404	CNVD
Congenital anomalies of the kidney and urinary tract	20299530	CNVD
Developmental delay	21147756	CNVD
Breast cancer	21509527	CNVD
Cancer	21129771	CNVD
Myelofibrosis	22110671	CNVD
Neurodevelopmental disorder	16760732	CNVD
Schizophrenia	22118685	CNVD
Schizophrenia	22958593	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	20970697	CNVD
Mental retardation	19951919	CNVD
Autism	20970697	CNVD
Developmental delay	18471269	CNVD
Intellectual disability	22045946	CNVD
Breast cancer	21045282	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Ovarian cancer	20844748	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Uveal melanoma	20484589	CNVD
3q29 microdeletion syndrome	20500065	CNVD
Biliary cancer	20453639	CNVD
3q29 microdeletion syndrome	22283845	CNVD
3q29 microdeletion syndrome	21626679	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Ovarian cancer	21720365	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Chronic lymphocytic leukemia	20421269	CNVD

Chromatin state (count:340 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:196015200-196044400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr3:196015400-196043800	Weak transcription	Brain Substantia Nigra	brain
3	chr3:196015400-196043800	Weak transcription	Fetal Kidney	kidney
4	chr3:196015400-196043800	Weak transcription	Fetal Lung	lung
5	chr3:196015400-196044400	Weak transcription	Brain Cingulate Gyrus	brain
6	chr3:196015400-196044400	Weak transcription	Colon Smooth Muscle	Colon
7	chr3:196015400-196044400	Weak transcription	Lung	lung
8	chr3:196015600-196043600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr3:196015600-196043600	Weak transcription	Fetal Brain Male	brain
10	chr3:196015600-196043800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr3:196015600-196043800	Weak transcription	Brain Angular Gyrus	brain
12	chr3:196015600-196044200	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr3:196015600-196044200	Weak transcription	Adipose Nuclei	Adipose
14	chr3:196015600-196044400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr3:196015800-196042800	Weak transcription	HMEC	breast
16	chr3:196015800-196043000	Weak transcription	Primary T helper cells fromperipheralblood	blood
17	chr3:196015800-196043400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr3:196015800-196043600	Weak transcription	A549	lung
19	chr3:196015800-196043800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr3:196015800-196043800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr3:196015800-196043800	Weak transcription	Stomach Smooth Muscle	stomach
22	chr3:196015800-196043800	Weak transcription	HSMM	muscle
23	chr3:196015800-196044200	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr3:196015800-196044400	Weak transcription	Placenta Amnion	Placenta Amnion
25	chr3:196016000-196043600	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr3:196016000-196043600	Weak transcription	Primary T helper cells PMA-I stimulated	--
27	chr3:196018600-196044200	Weak transcription	Fetal Intestine Large	intestine
28	chr3:196023200-196044400	Weak transcription	Left Ventricle	heart
29	chr3:196023400-196044400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr3:196024800-196043600	Weak transcription	GM12878-XiMat	blood
31	chr3:196025200-196044400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
32	chr3:196025600-196043800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr3:196026400-196044200	Weak transcription	Placenta	Placenta
34	chr3:196027400-196043800	Weak transcription	Thymus	Thymus
35	chr3:196027800-196044200	Weak transcription	Fetal Intestine Small	intestine
36	chr3:196028200-196043800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr3:196029000-196044200	Weak transcription	Brain Anterior Caudate	brain
38	chr3:196029400-196043600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr3:196029600-196043600	Weak transcription	Osteobl	bone
40	chr3:196029600-196043800	Weak transcription	HUES6 Cell Line	embryonic stem cell
41	chr3:196029600-196043800	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr3:196030200-196044200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr3:196030600-196043600	Weak transcription	NHDF-Ad	bronchial
44	chr3:196030600-196043800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr3:196031200-196043600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr3:196031200-196043800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
47	chr3:196031400-196044200	Weak transcription	Fetal Thymus	thymus
48	chr3:196031400-196044400	Weak transcription	Right Atrium	heart
49	chr3:196031600-196044400	Weak transcription	Primary T cells from cord blood	blood
50	chr3:196031800-196042600	Weak transcription	NHEK	skin

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