Variant report

Variant	esv3389299
Chromosome Location	chr9:72286157-72289005
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:72287778-72288055	HepG2	liver:	n/a	chr9:72287860-72287868
2	ATF2	chr9:72287724-72288162	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF3	chr9:72287881-72288378	A549	lung:	n/a	n/a
4	BACH1	chr9:72287312-72288183	H1-hESC	embryonic stem cell:	n/a	n/a
5	BCLAF1	chr9:72287701-72288096	GM12878	blood:	n/a	chr9:72287806-72287819
6	BHLHE40	chr9:72287817-72288069	GM12878	blood:	n/a	n/a
7	BHLHE40	chr9:72287749-72288045	K562	blood:	n/a	n/a
8	BRCA1	chr9:72287860-72288060	HepG2	liver:	n/a	n/a
9	CHD1	chr9:72287698-72288163	H1-hESC	embryonic stem cell:	n/a	n/a
10	CHD1	chr9:72287885-72287990	GM12878	blood:	n/a	n/a
11	CHD2	chr9:72287842-72288051	GM12878	blood:	n/a	n/a
12	CHD2	chr9:72286831-72286895	H1-hESC	embryonic stem cell:	n/a	n/a
13	CHD2	chr9:72287763-72288178	H1-hESC	embryonic stem cell:	n/a	n/a
14	CREB1	chr9:72287746-72288169	H1-hESC	embryonic stem cell:	n/a	n/a
15	CREB1	chr9:72287661-72288242	H1-hESC	embryonic stem cell:	n/a	n/a
16	CREB1	chr9:72287806-72288128	A549	lung:	n/a	n/a
17	CTBP2	chr9:72287423-72288203	H1-hESC	embryonic stem cell:	n/a	n/a
18	CTBP2	chr9:72286573-72287153	H1-hESC	embryonic stem cell:	n/a	n/a
19	CTCF	chr9:72287168-72287173	LNCaP	prostate:	n/a	n/a
20	CTCF	chr9:72287860-72288010	HMEC	breast:	n/a	chr9:72287953-72287962
21	CTCF	chr9:72287001-72287004	A549	lung:	n/a	n/a
22	CTCF	chr9:72287560-72287710	HepG2	liver:	n/a	chr9:72287629-72287642
23	CTCF	chr9:72287860-72288010	GM12871	blood:	n/a	chr9:72287953-72287962
24	CTCF	chr9:72287828-72288084	GM10248	blood:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
25	CTCF	chr9:72287900-72288050	AG09319	gingival:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
26	CTCF	chr9:72287603-72287612	GM19240	blood:	n/a	n/a
27	CTCF	chr9:72287810-72288112	GM12878	blood:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
28	CTCF	chr9:72288165-72288169	NHEK	skin:	n/a	n/a
29	CTCF	chr9:72287405-72287454	MCF-7	breast:	n/a	n/a
30	CTCF	chr9:72287840-72287990	SK-N-SH_RA	brain:	n/a	chr9:72287953-72287962
31	CTCF	chr9:72287860-72288010	MCF-7	breast:	n/a	chr9:72287953-72287962
32	CTCF	chr9:72287742-72288239	MCF-7	breast:	n/a	chr9:72288204-72288214 chr9:72287953-72287962 chr9:72288010-72288019
33	CTCF	chr9:72287920-72288070	HEK293	kidney:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
34	CTCF	chr9:72287860-72288010	GM12866	blood:	n/a	chr9:72287953-72287962
35	CTCF	chr9:72287822-72288096	Kidney_OC	kidney:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
36	CTCF	chr9:72287491-72287524	GM13976	blood:	n/a	chr9:72287510-72287523
37	CTCF	chr9:72287860-72288010	GM12869	blood:	n/a	chr9:72287953-72287962
38	CTCF	chr9:72287804-72288101	Pancreas_OC	pancreas:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
39	CTCF	chr9:72286900-72287050	AG09319	gingival:	n/a	n/a
40	CTCF	chr9:72287840-72287990	HepG2	liver:	n/a	chr9:72287953-72287962
41	CTCF	chr9:72287860-72288010	AG04450	lung:	n/a	chr9:72287953-72287962
42	CTCF	chr9:72287880-72288030	HPF	lung:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
43	CTCF	chr9:72287020-72287170	HBMEC	blood vessel:	n/a	n/a
44	CTCF	chr9:72287860-72288010	HBMEC	blood vessel:	n/a	chr9:72287953-72287962
45	CTCF	chr9:72287779-72288091	GM19239	blood:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
46	CTCF	chr9:72286620-72286770	AG04449	skin:	n/a	n/a
47	CTCF	chr9:72287880-72288030	HMF	breast:	n/a	chr9:72287953-72287962 chr9:72288010-72288019
48	CTCF	chr9:72286540-72286690	NHDF-neo	bronchial:	n/a	n/a
49	CTCF	chr9:72287141-72287219	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr9:72287832-72288082	GM10266	blood:	n/a	chr9:72287953-72287962 chr9:72288010-72288019

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:72288098-72288148	SK-N-SH	brain:	n/a
2	chr9:72288179-72288229	PFSK-1	brain:	n/a
3	chr9:72288098-72288148	H1-hESC	embryonic stem cell:	embryo
4	chr9:72287152-72287202	AoSMC	blood vessel:	n/a
5	chr9:72288156-72288206	Jurkat	blood:	n/a
6	chr9:72287123-72287173	NB4	blood:	n/a
7	chr9:72288179-72288229	HEEpiC	esophagus:	n/a
8	chr9:72288098-72288148	AG10803	skin:	n/a
9	chr9:72287123-72287173	NHBE	bronchial:	n/a
10	chr9:72287123-72287173	HL-60	blood:	n/a
11	chr9:72288156-72288206	Hepatocyte	liver:	n/a
12	chr9:72287821-72287871	AG10803	skin:	n/a
13	chr9:72287772-72287822	HAEpiC	amniotic membrane:	n/a
14	chr9:72288069-72288119	HIPEpiC	eye:	n/a
15	chr9:72288179-72288229	SKMC	muscle:	n/a
16	chr9:72287123-72287173	HEK293	kidney:	embryo
17	chr9:72288156-72288206	ProgFib	skin:	n/a
18	chr9:72288069-72288119	PFSK-1	brain:	n/a
19	chr9:72288179-72288229	K562	blood:	n/a
20	chr9:72288069-72288119	AG10803	skin:	n/a
21	chr9:72287772-72287822	HRE	kidney:	n/a
22	chr9:72288156-72288206	SK-N-SH_RA	brain:	n/a
23	chr9:72287821-72287871	ProgFib	skin:	n/a
24	chr9:72288179-72288229	HRCEpiC	kidney:	n/a
25	chr9:72287123-72287173	SK-N-SH	brain:	n/a
26	chr9:72288098-72288148	LNCaP	prostate:	n/a
27	chr9:72287152-72287202	GM06990	blood:	n/a
28	chr9:72288098-72288148	NT2-D1	testis:	n/a
29	chr9:72287123-72287173	HAEpiC	amniotic membrane:	n/a
30	chr9:72288069-72288119	HEK293	kidney:	embryo
31	chr9:72288069-72288119	HAEpiC	amniotic membrane:	n/a
32	chr9:72287821-72287871	PANC-1	pancreas:	n/a
33	chr9:72287772-72287822	GM12878	blood:	n/a
34	chr9:72287821-72287871	HEEpiC	esophagus:	n/a
35	chr9:72288098-72288148	U87	brain:	n/a
36	chr9:72288098-72288148	GM19239	blood:	n/a
37	chr9:72287152-72287202	HepG2	liver:	n/a
38	chr9:72288156-72288206	HCF	heart:	n/a
39	chr9:72287123-72287173	SAEC	small airway:	n/a
40	chr9:72288098-72288148	GM06990	blood:	n/a
41	chr9:72287772-72287822	Hepatocyte	liver:	n/a
42	chr9:72288069-72288119	ECC-1	luminal epithelium:	n/a
43	chr9:72288179-72288229	NT2-D1	testis:	n/a
44	chr9:72288069-72288119	HCF	heart:	n/a
45	chr9:72287772-72287822	AG09319	gingival:	n/a
46	chr9:72288179-72288229	GM12891	blood:	n/a
47	chr9:72287123-72287173	SK-N-SH_RA	brain:	n/a
48	chr9:72287821-72287871	ovcar-3	ovarian:	n/a
49	chr9:72287772-72287822	IMR90	lung:	fetal
50	chr9:72288179-72288229	PANC-1	pancreas:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:72286195..72289118-chr9:72373474..72376010,3	MCF-7	breast:
2	chr3:144137145..144137665-chr9:72287895..72288430,2	MCF-7	breast:
3	chr9:72265675..72268152-chr9:72283798..72286751,2	MCF-7	breast:
4	chr9:72287056..72289421-chr9:72373634..72375235,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C9orf135-2	chr9:72287665-72288629	ENSG00000261447.1

Variant related genes	Relation type
APBA1	TF binding region
ENSG00000261447	TF binding region
APBA1	CpG island
ENSG00000261447	CpG island
ENSG00000188647	chromatin interactions

Extended variants
information (count: 84 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:84 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs551252789	chr9:72286160-72286161	Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs56341932	chr9:72286209-72286210	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs888601	chr9:72286253-72286254	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs551779906	chr9:72286254-72286255	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs566894562	chr9:72286269-72286270	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs145792150	chr9:72286272-72286273	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs555878619	chr9:72286360-72286361	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs573707954	chr9:72286469-72286470	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs537660110	chr9:72286535-72286536	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs181012322	chr9:72286536-72286537	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs577538507	chr9:72286537-72286538	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs544935107	chr9:72286590-72286591	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs559882673	chr9:72286639-72286640	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs376933516	chr9:72286643-72286644	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs369196782	chr9:72286645-72286646	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs572054103	chr9:72286671-72286672	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs542310961	chr9:72286675-72286676	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs372740005	chr9:72286681-72286682	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs561045724	chr9:72286755-72286756	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs529472221	chr9:72286806-72286807	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs551216130	chr9:72286906-72286907	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs12348441	chr9:72286945-72286946	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs563101156	chr9:72286956-72286957	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs2309517	chr9:72287026-72287027	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs138398728	chr9:72287163-72287164	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs566751222	chr9:72287197-72287198	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs534204868	chr9:72287251-72287252	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs111848252	chr9:72287357-72287358	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs549167775	chr9:72287376-72287377	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs567764067	chr9:72287380-72287381	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs537623379	chr9:72287406-72287407	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs7862740	chr9:72287437-72287438	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs577455452	chr9:72287498-72287499	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs538543220	chr9:72287500-72287501	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs554037504	chr9:72287501-72287502	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs571903510	chr9:72287503-72287504	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs542621503	chr9:72287515-72287516	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs4744930	chr9:72287581-72287582	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs200452330	chr9:72287635-72287636	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs143624667	chr9:72287652-72287653	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs563065782	chr9:72287690-72287691	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
42	rs4744931	chr9:72287790-72287791	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs148048051	chr9:72287808-72287809	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
44	rs145673070	chr9:72287836-72287837	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
45	rs560849163	chr9:72287844-72287845	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
46	rs527653247	chr9:72287910-72287911	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
47	rs549380849	chr9:72287918-72287919	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
48	rs142570347	chr9:72287937-72287938	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
49	rs531682460	chr9:72287960-72287961	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
50	rs549908807	chr9:72287982-72287983	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	20729466	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Oral cancer	21386901	CNVD
Epilepsy	22083797	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:551 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72260600-72286200	Weak transcription	Aorta	Aorta
2	chr9:72277400-72286200	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr9:72283800-72286400	Weak transcription	Right Atrium	heart
4	chr9:72285200-72286200	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr9:72285200-72286600	Flanking Active TSS	Fetal Brain Female	brain
6	chr9:72285400-72286200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr9:72285400-72286200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
8	chr9:72285400-72286200	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr9:72285400-72286600	Flanking Active TSS	Fetal Brain Male	brain
10	chr9:72285400-72286800	Flanking Active TSS	Liver	Liver
11	chr9:72285400-72288400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
12	chr9:72285600-72286200	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
13	chr9:72285600-72286200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr9:72285600-72286200	Enhancers	Cortex derived primary cultured neurospheres	brain
15	chr9:72285600-72286200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr9:72285600-72286200	Enhancers	Fetal Heart	heart
17	chr9:72285600-72286200	Bivalent Enhancer	Fetal Muscle Leg	muscle
18	chr9:72285600-72286200	Enhancers	Ovary	ovary
19	chr9:72285600-72286200	Active TSS	Rectal Smooth Muscle	rectum
20	chr9:72285600-72286200	Enhancers	Skeletal Muscle Female	skeletal muscle
21	chr9:72285600-72286200	Bivalent Enhancer	HUVEC	blood vessel
22	chr9:72285600-72286600	Enhancers	Primary T helper cells fromperipheralblood	blood
23	chr9:72285600-72286600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr9:72285600-72286600	Bivalent Enhancer	Spleen	Spleen
25	chr9:72285800-72286200	Enhancers	NHLF	lung
26	chr9:72285800-72286400	Enhancers	Right Ventricle	heart
27	chr9:72286000-72286200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr9:72286000-72286200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr9:72286000-72286200	Active TSS	Muscle Satellite Cultured Cells	--
30	chr9:72286000-72286200	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr9:72286000-72286200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
32	chr9:72286000-72286200	Active TSS	Fetal Muscle Trunk	muscle
33	chr9:72286000-72286200	Enhancers	Stomach Smooth Muscle	stomach
34	chr9:72286000-72286200	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
35	chr9:72286000-72286200	Active TSS	NH-A	brain
36	chr9:72286000-72286400	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
37	chr9:72286000-72286400	Flanking Active TSS	Brain Cingulate Gyrus	brain
38	chr9:72286000-72286400	Flanking Active TSS	Brain Hippocampus Middle	brain
39	chr9:72286000-72286400	Flanking Active TSS	Fetal Stomach	stomach
40	chr9:72286000-72286600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr9:72286000-72286600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr9:72286000-72286600	Flanking Active TSS	Brain Angular Gyrus	brain
43	chr9:72286000-72286600	Flanking Active TSS	Brain Anterior Caudate	brain
44	chr9:72286000-72286600	Flanking Active TSS	Brain Germinal Matrix	brain
45	chr9:72286000-72286600	Flanking Active TSS	Fetal Kidney	kidney
46	chr9:72286000-72286600	Flanking Active TSS	Fetal Lung	lung
47	chr9:72286000-72286600	Flanking Active TSS	NHDF-Ad	bronchial
48	chr9:72286000-72286800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr9:72286000-72286800	Flanking Active TSS	Adipose Nuclei	Adipose
50	chr9:72286000-72286800	Flanking Active TSS	Colon Smooth Muscle	Colon

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