Variant report

Variant	esv3390473
Chromosome Location	chr4:1223002-1225800
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:110)
CpG islands
(count:549)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:110 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr4:1225798-1225948	HepG2	liver:	n/a	n/a
2	CTCF	chr4:1223982-1224054	GM12891	blood:	n/a	n/a
3	CTCF	chr4:1224040-1224190	HepG2	liver:	n/a	n/a
4	CTCF	chr4:1223901-1224012	GM19239	blood:	n/a	n/a
5	CTCF	chr4:1224017-1224024	GM19239	blood:	n/a	n/a
6	CTCF	chr4:1223968-1224086	H1-hESC	embryonic stem cell:	n/a	n/a
7	EGR1	chr4:1224774-1225194	H1-hESC	embryonic stem cell:	n/a	n/a
8	EGR1	chr4:1224759-1225247	H1-hESC	embryonic stem cell:	n/a	n/a
9	EGR1	chr4:1224849-1225146	K562	blood:	n/a	n/a
10	FOSL2	chr4:1225711-1226051	HepG2	liver:	n/a	n/a
11	HNF4A	chr4:1225792-1226047	HepG2	liver:	n/a	n/a
12	NR2F2	chr4:1225714-1226179	HepG2	liver:	n/a	n/a
13	POLR2A	chr4:1225511-1225584	K562	blood:	n/a	n/a
14	POLR2A	chr4:1224669-1225389	HL-60	blood:	n/a	n/a
15	POLR2A	chr4:1224812-1225515	GM12878	blood:	n/a	n/a
16	POLR2A	chr4:1222958-1223238	A549	lung:	n/a	n/a
17	POLR2A	chr4:1224797-1225254	ECC-1	luminal epithelium:	n/a	n/a
18	POLR2A	chr4:1225471-1225667	K562	blood:	n/a	n/a
19	POLR2A	chr4:1224002-1224030	HUVEC	blood vessel:	n/a	n/a
20	POLR2A	chr4:1225487-1225518	H1-hESC	embryonic stem cell:	n/a	n/a
21	POLR2A	chr4:1223794-1223954	A549	lung:	n/a	n/a
22	POLR2A	chr4:1224915-1225206	GM12878	blood:	n/a	n/a
23	POLR2A	chr4:1223757-1224384	GM12878	blood:	n/a	n/a
24	POLR2A	chr4:1224543-1224562	K562	blood:	n/a	n/a
25	POLR2A	chr4:1223411-1223489	A549	lung:	n/a	n/a
26	POLR2A	chr4:1225219-1225273	HUVEC	blood vessel:	n/a	n/a
27	POLR2A	chr4:1223974-1224003	GM12878	blood:	n/a	n/a
28	POLR2A	chr4:1223783-1223971	Hela-S3	cervix:	n/a	n/a
29	POLR2A	chr4:1223883-1224074	A549	lung:	n/a	n/a
30	POLR2A	chr4:1223915-1223942	H1-hESC	embryonic stem cell:	n/a	n/a
31	POLR2A	chr4:1225424-1225959	HepG2	liver:	n/a	n/a
32	POLR2A	chr4:1223199-1223442	K562	blood:	n/a	n/a
33	POLR2A	chr4:1223125-1224270	K562	blood:	n/a	n/a
34	POLR2A	chr4:1222942-1223228	A549	lung:	n/a	n/a
35	POLR2A	chr4:1222838-1223230	A549	lung:	n/a	n/a
36	POLR2A	chr4:1224806-1224943	Hela-S3	cervix:	n/a	n/a
37	POLR2A	chr4:1225143-1225213	HUVEC	blood vessel:	n/a	n/a
38	POLR2A	chr4:1222856-1223028	HUVEC	blood vessel:	n/a	n/a
39	POLR2A	chr4:1224915-1225104	H1-hESC	embryonic stem cell:	n/a	n/a
40	POLR2A	chr4:1222733-1224174	HepG2	liver:	n/a	n/a
41	POLR2A	chr4:1223662-1224106	GM12891	blood:	n/a	n/a
42	POLR2A	chr4:1223615-1223744	H1-hESC	embryonic stem cell:	n/a	n/a
43	POLR2A	chr4:1224100-1224120	HUVEC	blood vessel:	n/a	n/a
44	POLR2A	chr4:1225309-1225614	ECC-1	luminal epithelium:	n/a	n/a
45	POLR2A	chr4:1222830-1223440	GM12892	blood:	n/a	n/a
46	POLR2A	chr4:1225114-1225732	SK-N-MC	brain:	n/a	n/a
47	POLR2A	chr4:1225430-1225655	IMR90	lung:	n/a	n/a
48	POLR2A	chr4:1222819-1223203	A549	lung:	n/a	n/a
49	POLR2A	chr4:1222854-1223515	GM19193	blood:	n/a	n/a
50	POLR2A	chr4:1223988-1223995	K562	blood:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:1224709-1224759	PANC-1	pancreas:	n/a
2	chr4:1224633-1224683	MCF10A-Er-Src	breast:	n/a
3	chr4:1224499-1224549	H1-hESC	embryonic stem cell:	embryo
4	chr4:1225729-1225779	HRCEpiC	kidney:	n/a
5	chr4:1224633-1224683	PANC-1	pancreas:	n/a
6	chr4:1224054-1224104	AG04449	skin:	fetal
7	chr4:1225507-1225557	IMR90	lung:	fetal
8	chr4:1223170-1223220	HUVEC	blood vessel:	n/a
9	chr4:1224709-1224759	SK-N-SH_RA	brain:	n/a
10	chr4:1224499-1224549	MCF-7	breast:	n/a
11	chr4:1225729-1225779	ECC-1	luminal epithelium:	n/a
12	chr4:1225599-1225649	RPTEC	kidney:	n/a
13	chr4:1224709-1224759	HEEpiC	esophagus:	n/a
14	chr4:1224633-1224683	IMR90	lung:	fetal
15	chr4:1225729-1225779	AG09309	skin:	n/a
16	chr4:1225507-1225557	U87	brain:	n/a
17	chr4:1224246-1224296	MCF10A-Er-Src	breast:	n/a
18	chr4:1224633-1224683	SAEC	small airway:	n/a
19	chr4:1223170-1223220	BJ	skin:	n/a
20	chr4:1224633-1224683	HMEC	breast:	n/a
21	chr4:1224633-1224683	ECC-1	luminal epithelium:	n/a
22	chr4:1225599-1225649	BE2_C	brain:	n/a
23	chr4:1224054-1224104	GM12892	blood:	n/a
24	chr4:1223170-1223220	MCF-7	breast:	n/a
25	chr4:1225507-1225557	AG10803	skin:	n/a
26	chr4:1225507-1225557	HepG2	liver:	n/a
27	chr4:1225729-1225779	Hepatocyte	liver:	n/a
28	chr4:1224246-1224296	NB4	blood:	n/a
29	chr4:1224246-1224296	AoSMC	blood vessel:	n/a
30	chr4:1225507-1225557	ECC-1	luminal epithelium:	n/a
31	chr4:1223170-1223220	NHDF-neo	bronchial:	n/a
32	chr4:1224633-1224683	A549	lung:	n/a
33	chr4:1225599-1225649	HCF	heart:	n/a
34	chr4:1224633-1224683	GM12878	blood:	n/a
35	chr4:1224633-1224683	HIPEpiC	eye:	n/a
36	chr4:1224499-1224549	NHDF-neo	bronchial:	n/a
37	chr4:1225599-1225649	PrEC	prostate:	n/a
38	chr4:1224246-1224296	PANC-1	pancreas:	n/a
39	chr4:1224054-1224104	HPAEpiC	pulmonary alveolar:	n/a
40	chr4:1224246-1224296	MCF-7	breast:	n/a
41	chr4:1223170-1223220	Hela-S3	cervix:	n/a
42	chr4:1224054-1224104	AG09309	skin:	n/a
43	chr4:1223170-1223220	HL-60	blood:	n/a
44	chr4:1224709-1224759	HCT-116	colon:	n/a
45	chr4:1224054-1224104	GM19239	blood:	n/a
46	chr4:1224709-1224759	GM12892	blood:	n/a
47	chr4:1225599-1225649	IMR90	lung:	fetal
48	chr4:1225729-1225779	HRE	kidney:	n/a
49	chr4:1225507-1225557	NHBE	bronchial:	n/a
50	chr4:1224709-1224759	HepG2	liver:	n/a

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:1221651..1224397-chr4:1224479..1227066,2	MCF-7	breast:
2	chr4:1221651..1224397-chr4:1224479..1227066,2	MCF-7	breast:
3	chr4:1195937..1198894-chr4:1221468..1224458,3	K562	blood:
4	chr4:1219143..1221497-chr4:1224349..1226849,2	MCF-7	breast:
5	chr4:1222400..1224285-chr4:1225598..1228756,4	MCF-7	breast:

No data

Variant related genes	Relation type
CTBP1	TF binding region
CTBP1	CpG island
ENSG00000159674	chromatin interactions
ENSG00000159692	chromatin interactions

Extended variants
information (count: 156 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:156 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs547061463	chr4:1223060-1223061	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs552362122	chr4:1223095-1223096	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs564278292	chr4:1223096-1223097	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs112580653	chr4:1223097-1223098	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs549943275	chr4:1223119-1223120	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs35376712	chr4:1223124-1223125	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
7	rs535401682	chr4:1223162-1223163	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs113981938	chr4:1223168-1223169	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs567112672	chr4:1223177-1223178	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs116029673	chr4:1223180-1223181	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs558721643	chr4:1223194-1223195	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs190160290	chr4:1223283-1223284	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs537930288	chr4:1223284-1223285	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs557440384	chr4:1223304-1223305	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs574861484	chr4:1223305-1223306	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs146540179	chr4:1223330-1223331	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs376920314	chr4:1223338-1223339	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs560297163	chr4:1223339-1223340	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs148601619	chr4:1223343-1223344	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs182815400	chr4:1223352-1223353	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs550977478	chr4:1223353-1223354	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs75752733	chr4:1223422-1223423	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs115455407	chr4:1223495-1223496	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs371400931	chr4:1223511-1223512	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs531564527	chr4:1223523-1223524	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs550022453	chr4:1223530-1223531	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs561787572	chr4:1223569-1223570	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs528988962	chr4:1223633-1223634	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs547320827	chr4:1223663-1223664	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs186380362	chr4:1223669-1223670	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs569562240	chr4:1223687-1223688	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs534208781	chr4:1223719-1223720	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs375990383	chr4:1223762-1223763	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs552483110	chr4:1223765-1223766	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs570693230	chr4:1223856-1223857	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs145549832	chr4:1223883-1223884	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs377336008	chr4:1223885-1223886	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs112539044	chr4:1223927-1223928	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs77432819	chr4:1223929-1223930	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs74841677	chr4:1223930-1223931	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs74979025	chr4:1223937-1223938	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs535581273	chr4:1223948-1223949	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs554135357	chr4:1223961-1223962	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs572512815	chr4:1223973-1223974	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs546105005	chr4:1223996-1223997	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs138076074	chr4:1223997-1223998	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs141709082	chr4:1224000-1224001	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs370438190	chr4:1224005-1224006	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs561736050	chr4:1224006-1224007	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs528977984	chr4:1224022-1224023	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Myelofibrosis	22110671	CNVD
Wolf-Hirschhorn syndrome	21549014	CNVD
Breast cancer	21806811	CNVD
Wolf-Hirschhorn syndrome	22283845	CNVD
Wolf-Hirschhorn syndrome	16773131	CNVD
Mental retardation	16773131	CNVD
Wolf-Hirschhorn syndrome	22470819	CNVD
Wolf-Hirschhorn syndrome	18541967	CNVD
sporadic birth defects	19047251	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Retinitis pigmentosa	18421352	CNVD
Wolf-Hirschhorn syndrome	19259404	CNVD
Bladder cancer	19242612	CNVD
Breast cancer	19242612	CNVD
Congenital anomalies of the kidney and urinary tract	19242612	CNVD
abnormal development	18461090	CNVD
Olfactory neuroblastoma	18408657	CNVD
Wilms tumour	21544195	CNVD
Melanoma	20688739	CNVD
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17142309	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Developmental delay	21147756	CNVD
Urothelial carcinoma	21177765	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	20932292	CNVD
Pancreatic cancer	17952125	CNVD
Type 2 diabetes	21754918	CNVD
Breast cancer	22522925	CNVD
Breast cancer	20393555	CNVD

Chromatin state (count:189 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:1204400-1227200	Strong transcription	Fetal Intestine Small	intestine
2	chr4:1204400-1235800	Strong transcription	HUES6 Cell Line	embryonic stem cell
3	chr4:1204600-1236200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr4:1204800-1226400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr4:1204800-1237000	Weak transcription	Psoas Muscle	Psoas
6	chr4:1205000-1226200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr4:1205400-1226800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr4:1205800-1228200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr4:1206000-1226800	Strong transcription	Fetal Brain Female	brain
10	chr4:1206400-1226800	Strong transcription	Brain Germinal Matrix	brain
11	chr4:1206600-1227600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
12	chr4:1208800-1228000	Strong transcription	Muscle Satellite Cultured Cells	--
13	chr4:1210600-1225200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr4:1211400-1235400	Weak transcription	Small Intestine	intestine
15	chr4:1211600-1235400	Strong transcription	Sigmoid Colon	Sigmoid Colon
16	chr4:1212600-1225200	Strong transcription	Fetal Muscle Leg	muscle
17	chr4:1212600-1237000	Strong transcription	Dnd41	blood
18	chr4:1213600-1224200	Strong transcription	Placenta	Placenta
19	chr4:1214200-1235600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr4:1214200-1236800	Strong transcription	Primary T cells from cord blood	blood
21	chr4:1214400-1225000	Strong transcription	Brain Hippocampus Middle	brain
22	chr4:1214400-1225600	Strong transcription	Aorta	Aorta
23	chr4:1214400-1235200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
24	chr4:1214400-1235600	Strong transcription	H1 Cell Line	embryonic stem cell
25	chr4:1214400-1236400	Strong transcription	Primary neutrophils fromperipheralblood	blood
26	chr4:1214400-1238400	Strong transcription	Thymus	Thymus
27	chr4:1214600-1225400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr4:1214600-1226400	Strong transcription	Cortex derived primary cultured neurospheres	brain
29	chr4:1214600-1227400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr4:1214600-1227600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr4:1214600-1235800	Strong transcription	Primary T helper cells fromperipheralblood	blood
32	chr4:1214600-1236200	Strong transcription	Monocytes-CD14+_RO01746	blood
33	chr4:1215000-1226800	Strong transcription	Colonic Mucosa	Colon
34	chr4:1215000-1235200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr4:1215000-1236000	Strong transcription	Primary monocytes fromperipheralblood	blood
36	chr4:1215400-1225800	Strong transcription	Brain Anterior Caudate	brain
37	chr4:1215400-1226600	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr4:1215400-1236000	Strong transcription	Primary B cells from peripheral blood	blood
39	chr4:1215800-1226600	Strong transcription	Fetal Stomach	stomach
40	chr4:1215800-1235600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
41	chr4:1216400-1227800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr4:1216400-1227800	Strong transcription	Rectal Mucosa Donor 31	rectum
43	chr4:1216400-1235400	Strong transcription	Primary T helper cells PMA-I stimulated	--
44	chr4:1216400-1236000	Strong transcription	Fetal Thymus	thymus
45	chr4:1216600-1227200	Strong transcription	Placenta Amnion	Placenta Amnion
46	chr4:1216600-1236000	Strong transcription	GM12878-XiMat	blood
47	chr4:1216800-1225800	Strong transcription	Duodenum Smooth Muscle	Duodenum
48	chr4:1217000-1226800	Strong transcription	Duodenum Mucosa	Duodenum
49	chr4:1217000-1226800	Strong transcription	Rectal Mucosa Donor 29	rectum
50	chr4:1217200-1224600	Strong transcription	Rectal Smooth Muscle	rectum

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