No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs13373831 |
chr1:228193791-228193792 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs577237671 |
chr1:228193808-228193809 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs964941 |
chr1:228193857-228193858 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
4 |
rs545038304 |
chr1:228193891-228193892 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs145046306 |
chr1:228193920-228193921 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs56888086 |
chr1:228193931-228193932 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs138847704 |
chr1:228193937-228193938 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs534441350 |
chr1:228193956-228193957 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs369320815 |
chr1:228194004-228194005 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs149356066 |
chr1:228194068-228194069 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs538339805 |
chr1:228194077-228194078 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs144652777 |
chr1:228194109-228194110 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs74143611 |
chr1:228194140-228194141 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs137928867 |
chr1:228194154-228194155 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs375866271 |
chr1:228194158-228194159 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs530732677 |
chr1:228194171-228194172 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs538638310 |
chr1:228194225-228194226 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs553675768 |
chr1:228194357-228194358 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs572008724 |
chr1:228194512-228194513 |
Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
CpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs575335479 |
chr1:228194621-228194622 |
Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs542457120 |
chr1:228194734-228194735 |
Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs560760401 |
chr1:228194746-228194747 |
Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs76933265 |
chr1:228194775-228194776 |
Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs142002943 |
chr1:228194796-228194797 |
Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs564795189 |
chr1:228194892-228194893 |
Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs532168900 |
chr1:228194895-228194896 |
Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs189235103 |
chr1:228194973-228194974 |
Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs560806680 |
chr1:228194977-228194978 |
Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs111337619 |
chr1:228194984-228194985 |
Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs527998858 |
chr1:228195029-228195030 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs181591169 |
chr1:228195074-228195075 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs115913525 |
chr1:228195079-228195080 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs186692850 |
chr1:228195122-228195123 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs550280816 |
chr1:228195123-228195124 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs571625598 |
chr1:228195145-228195146 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs538696615 |
chr1:228195211-228195212 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs147310879 |
chr1:228195231-228195232 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs73110731 |
chr1:228195251-228195252 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
39 |
rs376136943 |
chr1:228195260-228195261 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs539296837 |
chr1:228195327-228195328 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs536146315 |
chr1:228195332-228195333 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs554416903 |
chr1:228195355-228195356 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs576202563 |
chr1:228195531-228195532 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs543237349 |
chr1:228195532-228195533 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs558647682 |
chr1:228195665-228195666 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs576855129 |
chr1:228195713-228195714 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs541086319 |
chr1:228195747-228195748 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs377499438 |
chr1:228195768-228195769 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|