No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs561012857 |
chr19:52129844-52129845 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs528357388 |
chr19:52129872-52129873 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs4801883 |
chr19:52129903-52129904 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs4801884 |
chr19:52129904-52129905 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs182108379 |
chr19:52130026-52130027 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs75214204 |
chr19:52130121-52130122 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs75511196 |
chr19:52130122-52130123 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs147859411 |
chr19:52130148-52130149 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs67056047 |
chr19:52130149-52130150 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs58875618 |
chr19:52130167-52130168 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs113235356 |
chr19:52130170-52130171 |
Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs117780119 |
chr19:52130213-52130214 |
Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs187765055 |
chr19:52130224-52130225 |
Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs146015727 |
chr19:52130269-52130270 |
Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs370143662 |
chr19:52130306-52130307 |
Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs8105105 |
chr19:52130337-52130338 |
Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs373725250 |
chr19:52130351-52130352 |
Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs376774452 |
chr19:52130363-52130364 |
Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs370649249 |
chr19:52130373-52130374 |
Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs142055598 |
chr19:52130436-52130437 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs372200299 |
chr19:52130437-52130438 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs201987666 |
chr19:52130438-52130439 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs145464067 |
chr19:52130440-52130441 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs367576404 |
chr19:52130443-52130444 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs138119952 |
chr19:52130454-52130455 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs142710973 |
chr19:52130459-52130460 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs145933843 |
chr19:52130471-52130472 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs571255842 |
chr19:52130485-52130486 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs17852719 |
chr19:52130487-52130488 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs17740650 |
chr19:52130488-52130489 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
31 |
rs192335508 |
chr19:52130495-52130496 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs575335138 |
chr19:52130514-52130515 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs370441125 |
chr19:52130516-52130517 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs376109543 |
chr19:52130519-52130520 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs183191856 |
chr19:52130538-52130539 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs554699654 |
chr19:52130554-52130555 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs572958944 |
chr19:52130559-52130560 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs117889167 |
chr19:52130572-52130573 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs188835509 |
chr19:52130580-52130581 |
ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs533133877 |
chr19:52130601-52130602 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs78500291 |
chr19:52130609-52130610 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs75123824 |
chr19:52130617-52130618 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs35495434 |
chr19:52130637-52130638 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs872629 |
chr19:52130638-52130639 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
45 |
rs531006998 |
chr19:52130692-52130693 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs368330559 |
chr19:52130704-52130705 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs368920325 |
chr19:52130707-52130708 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs371954393 |
chr19:52130709-52130710 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs368434474 |
chr19:52130724-52130725 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs372583092 |
chr19:52130736-52130737 |
ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|