Variant report

Variant esv3392751
Chromosome Location chr5:179560495-179563780
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:179555400-179560800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr5:179555400-179571000 Weak transcription Right Atrium heart
3 chr5:179556800-179562400 Weak transcription Brain Cingulate Gyrus brain
4 chr5:179556800-179566600 Weak transcription Brain Angular Gyrus brain
5 chr5:179557000-179562000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr5:179557000-179562200 Weak transcription Brain Inferior Temporal Lobe brain
7 chr5:179557200-179562000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:179559600-179565800 Weak transcription Fetal Brain Female brain
9 chr5:179560000-179561400 Enhancers Placenta Placenta
10 chr5:179560800-179561200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr5:179561200-179562200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr5:179561800-179562200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr5:179561800-179562800 Enhancers Cortex derived primary cultured neurospheres brain
14 chr5:179561800-179563000 Enhancers Osteobl bone
15 chr5:179561800-179563200 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr5:179561800-179563200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr5:179562000-179562200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr5:179562000-179562400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr5:179562000-179562600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr5:179562000-179562600 Enhancers Primary hematopoietic stem cells blood
21 chr5:179562000-179562600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr5:179562000-179562600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
23 chr5:179562000-179562600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
24 chr5:179562000-179562600 Enhancers Gastric stomach
25 chr5:179562000-179562600 Enhancers HUVEC blood vessel
26 chr5:179562000-179562800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:179562000-179562800 Enhancers Muscle Satellite Cultured Cells --
28 chr5:179562000-179562800 Enhancers NH-A brain
29 chr5:179562000-179563200 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr5:179562000-179563200 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr5:179562000-179564200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr5:179562200-179562600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:179562200-179562600 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr5:179562200-179562600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr5:179562200-179562600 Enhancers Brain Inferior Temporal Lobe brain
36 chr5:179562200-179562600 Enhancers Esophagus oesophagus
37 chr5:179562200-179562600 Enhancers NHEK skin
38 chr5:179562200-179562800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr5:179562200-179562800 Bivalent Enhancer Primary T cells fromperipheralblood blood
40 chr5:179562200-179562800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr5:179562200-179562800 Enhancers Brain Hippocampus Middle brain
42 chr5:179562200-179562800 Enhancers Brain Substantia Nigra brain
43 chr5:179562200-179562800 Enhancers HMEC breast
44 chr5:179562200-179562800 Enhancers HSMM muscle
45 chr5:179562200-179563000 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr5:179562200-179563200 Enhancers Fetal Muscle Leg muscle
47 chr5:179562200-179564000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr5:179562400-179562600 Enhancers Primary monocytes fromperipheralblood blood
49 chr5:179562400-179562600 Bivalent Enhancer Stomach Smooth Muscle stomach
50 chr5:179562400-179562800 Enhancers Primary mononuclear cells fromperipheralblood Blood

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