Variant report

Variant	esv3394597
Chromosome Location	chr14:46480002-46481350
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 102 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:102 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs535926903	chr14:46480019-46480020	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs536257926	chr14:46480028-46480029	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs554602147	chr14:46480074-46480075	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs573016876	chr14:46480091-46480092	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs555737002	chr14:46480112-46480113	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs373120384	chr14:46480115-46480116	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs572286437	chr14:46480165-46480166	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs553317869	chr14:46480181-46480182	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs72682724	chr14:46480199-46480200	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs148409249	chr14:46480201-46480202	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs564018228	chr14:46480246-46480247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs77381088	chr14:46480261-46480262	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs201112587	chr14:46480275-46480276	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs180686308	chr14:46480295-46480296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs186300710	chr14:46480301-46480302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs12433484	chr14:46480307-46480308	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs12436241	chr14:46480308-46480309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs12890278	chr14:46480317-46480318	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs190856300	chr14:46480325-46480326	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs182182007	chr14:46480331-46480332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs12436245	chr14:46480339-46480340	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs12436248	chr14:46480356-46480357	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs12433489	chr14:46480357-46480358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs376826642	chr14:46480375-46480376	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs369759064	chr14:46480378-46480379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs12436266	chr14:46480397-46480398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs376710068	chr14:46480413-46480414	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs370104438	chr14:46480414-46480415	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs12433512	chr14:46480415-46480416	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs570502526	chr14:46480417-46480418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs12890474	chr14:46480421-46480422	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs12891869	chr14:46480422-46480423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs186686293	chr14:46480437-46480438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs373497444	chr14:46480438-46480439	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs191693390	chr14:46480443-46480444	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs183090018	chr14:46480445-46480446	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs374482962	chr14:46480456-46480457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs377336282	chr14:46480469-46480470	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs376400810	chr14:46480484-46480485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs370192435	chr14:46480500-46480501	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs560935474	chr14:46480501-46480502	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs189876934	chr14:46480502-46480503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs182254462	chr14:46480503-46480504	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs188067290	chr14:46480522-46480523	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs193052667	chr14:46480527-46480528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs34097698	chr14:46480569-46480570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs185438368	chr14:46480578-46480579	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs188448529	chr14:46480592-46480593	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs547095027	chr14:46480606-46480607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs193057963	chr14:46480627-46480628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Colorectal cancer	16774939	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Wilms tumour	21544195	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21785460	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	21858162	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21183584	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Renal cell carcinoma	18194544	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	21364760	CNVD
Cancer	19907438	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:46479400-46480200	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr14:46480200-46487600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links