Variant report

Variant	esv3395522
Chromosome Location	chr10:43903571-43906119
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1066)
CpG islands
(count:1039)
Chromatin interactive
region (count:35)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1066 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:43904435-43904677	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:43904115-43905090	K562	blood:	n/a	n/a
3	ATF1	chr10:43904181-43905066	K562	blood:	n/a	n/a
4	ATF2	chr10:43902934-43903817	GM12878	blood:	n/a	n/a
5	ATF2	chr10:43904228-43904761	GM12878	blood:	n/a	n/a
6	ATF2	chr10:43904394-43904703	GM12878	blood:	n/a	n/a
7	ATF3	chr10:43903179-43903593	K562	blood:	n/a	n/a
8	ATF3	chr10:43904245-43904793	K562	blood:	n/a	chr10:43904670-43904679
9	BACH1	chr10:43905110-43905116	K562	blood:	n/a	n/a
10	BACH1	chr10:43903146-43903896	K562	blood:	n/a	n/a
11	BACH1	chr10:43902531-43904938	H1-hESC	embryonic stem cell:	n/a	n/a
12	BCL3	chr10:43904785-43905188	A549	lung:	n/a	chr10:43904979-43904988
13	BCL3	chr10:43903996-43904507	A549	lung:	n/a	chr10:43904333-43904342
14	BCL3	chr10:43902868-43903958	A549	lung:	n/a	chr10:43902997-43903010 chr10:43903647-43903656 chr10:43903001-43903014
15	BCL3	chr10:43904225-43904624	A549	lung:	n/a	chr10:43904333-43904342
16	BCL3	chr10:43902878-43903761	A549	lung:	n/a	chr10:43902997-43903010 chr10:43903647-43903656 chr10:43903001-43903014
17	BCLAF1	chr10:43902533-43903776	GM12878	blood:	n/a	chr10:43902639-43902652 chr10:43902997-43903010 chr10:43902677-43902690 chr10:43902676-43902689 chr10:43902679-43902688 chr10:43903647-43903656 chr10:43902676-43902685 chr10:43903001-43903014
18	BCLAF1	chr10:43905137-43905728	GM12878	blood:	n/a	n/a
19	BCLAF1	chr10:43904097-43904870	GM12878	blood:	n/a	chr10:43904333-43904342
20	BCLAF1	chr10:43902941-43903641	GM12878	blood:	n/a	chr10:43902997-43903010 chr10:43903001-43903014
21	BCLAF1	chr10:43904132-43905186	GM12878	blood:	n/a	chr10:43904333-43904342 chr10:43904979-43904988
22	BCLAF1	chr10:43902289-43904800	K562	blood:	n/a	chr10:43902639-43902652 chr10:43902997-43903010 chr10:43902677-43902690 chr10:43904333-43904342 chr10:43902676-43902689 chr10:43902679-43902688 chr10:43903647-43903656 chr10:43902676-43902685 chr10:43903001-43903014
23	BCLAF1	chr10:43902934-43903888	K562	blood:	n/a	chr10:43902997-43903010 chr10:43903647-43903656 chr10:43903001-43903014
24	BHLHE40	chr10:43902077-43905128	K562	blood:	n/a	chr10:43903012-43903028 chr10:43902703-43902719
25	BHLHE40	chr10:43905448-43905648	GM12878	blood:	n/a	n/a
26	BHLHE40	chr10:43904252-43905106	HepG2	liver:	n/a	n/a
27	BHLHE40	chr10:43904124-43905143	GM12878	blood:	n/a	n/a
28	BHLHE40	chr10:43903135-43903836	A549	lung:	n/a	n/a
29	BHLHE40	chr10:43902404-43903827	GM12878	blood:	n/a	chr10:43903012-43903028 chr10:43902703-43902719
30	BHLHE40	chr10:43902733-43903843	HepG2	liver:	n/a	chr10:43903012-43903028
31	BRCA1	chr10:43904196-43905618	Hela-S3	cervix:	n/a	n/a
32	BRCA1	chr10:43904274-43904721	HepG2	liver:	n/a	n/a
33	BRCA1	chr10:43903069-43903645	HepG2	liver:	n/a	n/a
34	BRCA1	chr10:43903042-43903582	Hela-S3	cervix:	n/a	n/a
35	BRCA1	chr10:43905613-43905667	GM12878	blood:	n/a	n/a
36	CBX3	chr10:43904804-43905265	K562	blood:	n/a	n/a
37	CBX3	chr10:43902990-43905349	K562	blood:	n/a	n/a
38	CBX3	chr10:43902964-43903883	K562	blood:	n/a	n/a
39	CBX3	chr10:43904222-43904721	K562	blood:	n/a	n/a
40	CCNT2	chr10:43902029-43905188	K562	blood:	n/a	chr10:43902900-43902909 chr10:43904522-43904531 chr10:43904348-43904357 chr10:43904005-43904014 chr10:43904095-43904104 chr10:43904670-43904679
41	CEBPB	chr10:43904514-43905181	K562	blood:	n/a	n/a
42	CEBPB	chr10:43903050-43903592	A549	lung:	n/a	n/a
43	CEBPB	chr10:43903096-43903827	HepG2	liver:	n/a	n/a
44	CEBPB	chr10:43904599-43904746	HepG2	liver:	n/a	n/a
45	CEBPB	chr10:43902883-43903794	K562	blood:	n/a	n/a
46	CEBPB	chr10:43903026-43903688	ECC-1	luminal epithelium:	n/a	n/a
47	CEBPB	chr10:43903058-43903641	ECC-1	luminal epithelium:	n/a	n/a
48	CEBPB	chr10:43904164-43905265	Hela-S3	cervix:	n/a	n/a
49	CEBPB	chr10:43904388-43904672	H1-hESC	embryonic stem cell:	n/a	n/a
50	CEBPB	chr10:43903113-43903599	HepG2	liver:	n/a	n/a

(count:1039 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:43904326-43904376	AoSMC	blood vessel:	n/a
2	chr10:43904940-43904990	MCF10A-Er-Src	breast:	n/a
3	chr10:43904326-43904376	AoSMC	blood vessel:	n/a
4	chr10:43904940-43904990	MCF10A-Er-Src	breast:	n/a
5	chr10:43904553-43904603	HEK293	kidney:	embryo
6	chr10:43903588-43903638	LNCaP	prostate:	n/a
7	chr10:43905515-43905565	NB4	blood:	n/a
8	chr10:43904408-43904458	A549	lung:	n/a
9	chr10:43904861-43904911	U87	brain:	n/a
10	chr10:43904861-43904911	HCPEpiC	choroid plexus:	n/a
11	chr10:43905515-43905565	H1-hESC	embryonic stem cell:	embryo
12	chr10:43904777-43904827	PANC-1	pancreas:	n/a
13	chr10:43904777-43904827	Hepatocyte	liver:	n/a
14	chr10:43904777-43904827	HCM	heart:	n/a
15	chr10:43904417-43904467	HPAEpiC	pulmonary alveolar:	n/a
16	chr10:43904861-43904911	IMR90	lung:	fetal
17	chr10:43904768-43904818	NHDF-neo	bronchial:	n/a
18	chr10:43904326-43904376	A549	lung:	n/a
19	chr10:43904408-43904458	SKMC	muscle:	n/a
20	chr10:43904777-43904827	NHBE	bronchial:	n/a
21	chr10:43904450-43904500	AG04450	lung:	fetal
22	chr10:43903588-43903638	BE2_C	brain:	n/a
23	chr10:43904468-43904518	HCT-116	colon:	n/a
24	chr10:43904038-43904088	BJ	skin:	n/a
25	chr10:43904768-43904818	T-47D	breast:	n/a
26	chr10:43904940-43904990	RPTEC	kidney:	n/a
27	chr10:43904553-43904603	ProgFib	skin:	n/a
28	chr10:43904791-43904841	HCF	heart:	n/a
29	chr10:43904768-43904818	HMEC	breast:	n/a
30	chr10:43904450-43904500	AG10803	skin:	n/a
31	chr10:43904450-43904500	SK-N-SH_RA	brain:	n/a
32	chr10:43904038-43904088	GM06990	blood:	n/a
33	chr10:43904777-43904827	HEK293	kidney:	embryo
34	chr10:43904864-43904914	T-47D	breast:	n/a
35	chr10:43904408-43904458	PANC-1	pancreas:	n/a
36	chr10:43904326-43904376	AG04449	skin:	fetal
37	chr10:43905074-43905124	AG10803	skin:	n/a
38	chr10:43904408-43904458	SK-N-MC	brain:	n/a
39	chr10:43904468-43904518	NHDF-neo	bronchial:	n/a
40	chr10:43904553-43904603	HL-60	blood:	n/a
41	chr10:43904450-43904500	BE2_C	brain:	n/a
42	chr10:43904038-43904088	HPAEpiC	pulmonary alveolar:	n/a
43	chr10:43904468-43904518	HRCEpiC	kidney:	n/a
44	chr10:43904864-43904914	HRPEpiC	eye:	n/a
45	chr10:43904861-43904911	HCT-116	colon:	n/a
46	chr10:43904861-43904911	SK-N-SH_RA	brain:	n/a
47	chr10:43905074-43905124	SK-N-SH_RA	brain:	n/a
48	chr10:43904553-43904603	AG10803	skin:	n/a
49	chr10:43904417-43904467	NHDF-neo	bronchial:	n/a
50	chr10:43904940-43904990	ProgFib	skin:	n/a

(count:35 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:43902596..43905009-chr12:7053130..7055096,2	K562	blood:
2	chr10:43904256..43904791-chr9:131314180..131314935,2	Hela-S3	cervix:
3	chr10:43904675..43905601-chr2:85133815..85134604,2	Hela-S3	cervix:
4	chr10:43903101..43903701-chr17:73775476..73775989,2	Hela-S3	cervix:
5	chr10:43902834..43905281-chr10:44101183..44103050,2	MCF-7	breast:
6	chr10:43903244..43904543-chr10:43931320..43932838,6	Hela-S3	cervix:
7	chr10:43902951..43903891-chr11:62439137..62439806,2	NB4	blood:
8	chr10:43867647..43875264-chr10:43900659..43906151,11	MCF-7	breast:
9	chr1:28834319..28834870-chr10:43903446..43904273,2	Hela-S3	cervix:
10	chr1:156307804..156308468-chr10:43904566..43905506,2	Hela-S3	cervix:
11	chr10:43901751..43904156-chr7:26239345..26241405,2	K562	blood:
12	chr10:43903142..43903814-chr16:67207852..67208622,2	Hela-S3	cervix:
13	chr1:180991640..180992175-chr10:43902810..43903662,2	Hela-S3	cervix:
14	chr10:43903805..43904690-chr9:91925920..91926518,2	Hela-S3	cervix:
15	chr10:43696064..43699246-chr10:43901638..43904576,3	K562	blood:
16	chr10:43887055..43906178-chr10:43946385..43955803,85	K562	blood:
17	chr10:43903162..43904071-chr16:68002331..68002833,2	Hela-S3	cervix:
18	chr10:43901370..43906375-chr10:43928042..43934083,16	MCF-7	breast:
19	chr10:43903376..43903911-chr17:62501886..62502819,2	Hela-S3	cervix:
20	chr10:43903427..43904398-chr20:43594621..43595269,2	Hela-S3	cervix:
21	chr10:43904720..43905397-chr10:43951179..43951725,2	MCF-7	breast:
22	chr10:43903270..43903785-chr19:36139022..36139531,2	HCT-116	colon:
23	chr10:43904206..43905019-chr8:95731706..95732274,2	HCT-116	colon:
24	chr10:43901770..43904893-chr10:44100789..44103373,5	MCF-7	breast:
25	chr10:43904622..43905510-chr18:30050330..30050885,2	Hela-S3	cervix:
26	chr10:43903380..43903891-chr5:6712551..6713349,2	Hela-S3	cervix:
27	chr10:43903962..43904641-chr5:43483530..43484417,2	Hela-S3	cervix:
28	chr10:43904236..43905126-chr5:159826772..159827368,2	Hela-S3	cervix:
29	chr10:43901784..43908257-chr10:43928243..43934263,17	MCF-7	breast:
30	chr1:153507944..153508640-chr10:43903183..43903757,2	Hela-S3	cervix:
31	chr10:43902635..43905319-chr11:65265113..65267204,2	K562	blood:
32	chr10:43899870..43905980-chr10:43953401..43957689,7	MCF-7	breast:
33	chr10:43696835..43700131-chr10:43902185..43905182,4	K562	blood:
34	chr10:43904301..43905147-chr12:54674227..54674856,2	Hela-S3	cervix:
35	chr10:43904246..43904770-chr9:33166951..33167676,2	NB4	blood:

No data

Variant related genes	Relation type
HNRNPF	TF binding region
HNRNPF	CpG island
ENSG00000197694	chromatin interactions
ENSG00000163467	chromatin interactions
ENSG00000162194	chromatin interactions
ENSG00000111678	chromatin interactions
ENSG00000123975	chromatin interactions
ENSG00000122565	chromatin interactions
ENSG00000198298	chromatin interactions
ENSG00000135823	chromatin interactions
ENSG00000163468	chromatin interactions
ENSG00000156162	chromatin interactions
ENSG00000252532	chromatin interactions
ENSG00000086062	chromatin interactions
ENSG00000233554	chromatin interactions
ENSG00000135486	chromatin interactions
ENSG00000126267	chromatin interactions
ENSG00000227477	chromatin interactions
ENSG00000122566	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000258890	chromatin interactions
ENSG00000141441	chromatin interactions
ENSG00000124067	chromatin interactions
ENSG00000150201	chromatin interactions
ENSG00000101109	chromatin interactions
ENSG00000251562	chromatin interactions
ENSG00000243660	chromatin interactions
ENSG00000197956	chromatin interactions
ENSG00000228395	chromatin interactions
ENSG00000198915	chromatin interactions
ENSG00000270117	chromatin interactions
ENSG00000272173	chromatin interactions
ENSG00000186854	chromatin interactions
ENSG00000108654	chromatin interactions
ENSG00000232004	chromatin interactions
ENSG00000151881	chromatin interactions
ENSG00000140939	chromatin interactions
ENSG00000249492	chromatin interactions
ENSG00000221886	chromatin interactions

Extended variants
information (count: 113 )
Associated
traits (count: 54 )

Variant overlapped rSNPs/rCNVs (count:113 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs545530313	chr10:43903622-43903623	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
2	rs563487384	chr10:43903645-43903646	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
3	rs186620654	chr10:43903710-43903711	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
4	rs530937959	chr10:43903713-43903714	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
5	rs148243209	chr10:43903732-43903733	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
6	rs561587883	chr10:43903747-43903748	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
7	rs528820587	chr10:43903750-43903751	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
8	rs368234263	chr10:43903763-43903764	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
9	rs527404741	chr10:43903776-43903777	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
10	rs571852135	chr10:43903783-43903784	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
11	rs539159118	chr10:43903793-43903794	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
12	rs547033172	chr10:43903860-43903861	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
13	rs191472688	chr10:43903876-43903877	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
14	rs569272316	chr10:43903912-43903913	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
15	rs536664697	chr10:43903917-43903918	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
16	rs2255967	chr10:43903919-43903920	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs573577729	chr10:43903953-43903954	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
18	rs534953972	chr10:43903961-43903962	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
19	rs552888428	chr10:43903993-43903994	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
20	rs577769492	chr10:43904032-43904033	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
21	rs561259601	chr10:43904045-43904046	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
22	rs182086508	chr10:43904059-43904060	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
23	rs563613036	chr10:43904083-43904084	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
24	rs545131239	chr10:43904095-43904096	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
25	rs563785257	chr10:43904132-43904133	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
26	rs575679527	chr10:43904134-43904135	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
27	rs543019232	chr10:43904185-43904186	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
28	rs561299605	chr10:43904200-43904201	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
29	rs1416226	chr10:43904207-43904208	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	17 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs540970277	chr10:43904221-43904222	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
31	rs565292142	chr10:43904230-43904231	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
32	rs532753095	chr10:43904232-43904233	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
33	rs551155413	chr10:43904235-43904236	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
34	rs140406513	chr10:43904248-43904249	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
35	rs530028406	chr10:43904268-43904269	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
36	rs548556232	chr10:43904275-43904276	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
37	rs566968390	chr10:43904283-43904284	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
38	rs150374795	chr10:43904332-43904333	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
39	rs553241262	chr10:43904350-43904351	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
40	rs368077000	chr10:43904371-43904372	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
41	rs542300433	chr10:43904384-43904385	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
42	rs138743837	chr10:43904410-43904411	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
43	rs369705889	chr10:43904486-43904487	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
44	rs575791162	chr10:43904520-43904521	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
45	rs543181926	chr10:43904544-43904545	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
46	rs555001618	chr10:43904546-43904547	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
47	rs573195337	chr10:43904567-43904568	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
48	rs34164342	chr10:43904578-43904579	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
49	rs540533048	chr10:43904588-43904589	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
50	rs569994740	chr10:43904596-43904597	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:54)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Mental retardation	21062444	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	22241247	CNVD
Intellectual disability	21811512	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Obesity	21956041	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21785460	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21948486	CNVD
Dysmorphic features	21948486	CNVD
Epilepsy	21948486	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:327 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:43900200-43904600	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
2	chr10:43900800-43905600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr10:43901000-43905800	Active TSS	HSMM	muscle
4	chr10:43901200-43904000	Flanking Active TSS	Primary hematopoietic stem cells	blood
5	chr10:43901200-43904400	Flanking Active TSS	Primary B cells from cord blood	blood
6	chr10:43901200-43905200	Active TSS	Small Intestine	intestine
7	chr10:43901200-43905800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr10:43901400-43905000	Active TSS	HMEC	breast
9	chr10:43901400-43905200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr10:43901400-43905400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
11	chr10:43901400-43905400	Active TSS	Primary T helper cells PMA-I stimulated	--
12	chr10:43901400-43905400	Active TSS	Ovary	ovary
13	chr10:43901400-43905600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr10:43901400-43905800	Active TSS	Pancreatic Islets	Pancreatic Islet
15	chr10:43901600-43905400	Active TSS	H1 Cell Line	embryonic stem cell
16	chr10:43901600-43905400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr10:43901600-43905400	Active TSS	Gastric	stomach
18	chr10:43901600-43905600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr10:43901600-43905600	Active TSS	HUES48 Cell Line	embryonic stem cell
20	chr10:43901600-43905600	Active TSS	iPS-15b Cell Line	embryonic stem cell
21	chr10:43901600-43905600	Active TSS	iPS-18 Cell Line	embryonic stem cell
22	chr10:43901600-43905600	Active TSS	Primary T killer memory cells from peripheral blood	blood
23	chr10:43901600-43905600	Active TSS	Right Atrium	heart
24	chr10:43901600-43905600	Active TSS	GM12878-XiMat	blood
25	chr10:43901600-43905600	Active TSS	HSMMtube	muscle
26	chr10:43901600-43905600	Active TSS	NHDF-Ad	bronchial
27	chr10:43901600-43905600	Active TSS	NHLF	lung
28	chr10:43901600-43905800	Active TSS	ES-I3 Cell Line	embryonic stem cell
29	chr10:43901600-43905800	Active TSS	HUES64 Cell Line	embryonic stem cell
30	chr10:43901600-43906000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr10:43901800-43905000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr10:43901800-43905000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr10:43901800-43905000	Active TSS	Breast Myoepithelial Primary Cells	Breast
34	chr10:43901800-43905000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr10:43901800-43905200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr10:43901800-43905400	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
37	chr10:43901800-43905400	Active TSS	Primary T helper naive cells from peripheral blood	blood
38	chr10:43901800-43905400	Active TSS	Liver	Liver
39	chr10:43901800-43905400	Active TSS	Esophagus	oesophagus
40	chr10:43901800-43905400	Active TSS	Fetal Intestine Large	intestine
41	chr10:43901800-43905400	Active TSS	Fetal Intestine Small	intestine
42	chr10:43901800-43905400	Active TSS	Sigmoid Colon	Sigmoid Colon
43	chr10:43901800-43905400	Active TSS	Stomach Mucosa	stomach
44	chr10:43901800-43905400	Active TSS	Hela-S3	cervix
45	chr10:43901800-43905600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr10:43901800-43905600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr10:43901800-43905600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr10:43901800-43905800	Active TSS	H9 Cell Line	embryonic stem cell
49	chr10:43901800-43905800	Active TSS	HUES6 Cell Line	embryonic stem cell
50	chr10:43901800-43905800	Active TSS	Duodenum Smooth Muscle	Duodenum

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