Variant report

Variant	esv3396417
Chromosome Location	chr7:6413052-6415600
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:661)
CpG islands
(count:550)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:661 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:6413828-6414114	K562	blood:	n/a	n/a
2	ARID3A	chr7:6413730-6413956	HepG2	liver:	n/a	n/a
3	ATF2	chr7:6413103-6413408	GM12878	blood:	n/a	n/a
4	ATF2	chr7:6413747-6414139	GM12878	blood:	n/a	n/a
5	BATF	chr7:6413135-6413413	GM12878	blood:	n/a	n/a
6	BATF	chr7:6413079-6413418	GM12878	blood:	n/a	n/a
7	BCL11A	chr7:6413154-6413328	GM12878	blood:	n/a	n/a
8	BCL11A	chr7:6413131-6413452	GM12878	blood:	n/a	n/a
9	BCLAF1	chr7:6413747-6414199	K562	blood:	n/a	chr7:6413984-6413997 chr7:6413985-6413998
10	BCLAF1	chr7:6413837-6414196	GM12878	blood:	n/a	chr7:6413984-6413997 chr7:6413985-6413998
11	BCLAF1	chr7:6414273-6414765	GM12878	blood:	n/a	chr7:6414443-6414452 chr7:6414679-6414692 chr7:6414683-6414696 chr7:6414409-6414422 chr7:6414430-6414443
12	BDP1	chr7:6413714-6414088	K562	blood:	n/a	n/a
13	BDP1	chr7:6413731-6414071	Hela-S3	cervix:	n/a	n/a
14	BHLHE40	chr7:6414445-6414717	K562	blood:	n/a	chr7:6414483-6414499
15	BHLHE40	chr7:6415592-6415603	GM12878	blood:	n/a	n/a
16	BHLHE40	chr7:6413718-6414098	K562	blood:	n/a	chr7:6413976-6413992 chr7:6413982-6413998
17	BHLHE40	chr7:6413572-6414822	GM12878	blood:	n/a	chr7:6414483-6414499 chr7:6413976-6413992 chr7:6413982-6413998
18	BHLHE40	chr7:6413187-6413315	GM12878	blood:	n/a	n/a
19	BHLHE40	chr7:6413904-6414162	HepG2	liver:	n/a	chr7:6413976-6413992 chr7:6413982-6413998
20	BRCA1	chr7:6414580-6414711	GM12878	blood:	n/a	n/a
21	BRCA1	chr7:6414005-6414036	H1-hESC	embryonic stem cell:	n/a	n/a
22	BRCA1	chr7:6413829-6414029	Hela-S3	cervix:	n/a	n/a
23	CBX3	chr7:6414855-6415166	K562	blood:	n/a	n/a
24	CBX3	chr7:6412966-6414110	K562	blood:	n/a	n/a
25	CCNT2	chr7:6413753-6414720	K562	blood:	n/a	n/a
26	CEBPB	chr7:6413814-6414242	A549	lung:	n/a	n/a
27	CEBPB	chr7:6412842-6413131	K562	blood:	n/a	chr7:6413000-6413011
28	CEBPB	chr7:6413862-6414152	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr7:6413754-6413903	K562	blood:	n/a	n/a
30	CEBPB	chr7:6412864-6413074	HepG2	liver:	n/a	chr7:6413000-6413011
31	CEBPB	chr7:6412793-6413177	K562	blood:	n/a	chr7:6413000-6413011
32	CEBPB	chr7:6412845-6413081	A549	lung:	n/a	chr7:6413000-6413011
33	CEBPB	chr7:6412815-6413088	K562	blood:	n/a	chr7:6413000-6413011
34	CEBPD	chr7:6413895-6414173	HepG2	liver:	n/a	n/a
35	CHD1	chr7:6414565-6415653	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD1	chr7:6414407-6415164	GM12878	blood:	n/a	n/a
37	CHD1	chr7:6415454-6415778	GM12878	blood:	n/a	n/a
38	CHD1	chr7:6413817-6415896	IMR90	lung:	n/a	n/a
39	CHD1	chr7:6413572-6413573	GM12878	blood:	n/a	n/a
40	CHD2	chr7:6413959-6414175	H1-hESC	embryonic stem cell:	n/a	n/a
41	CHD2	chr7:6413973-6414284	HepG2	liver:	n/a	n/a
42	CHD2	chr7:6413878-6414717	K562	blood:	n/a	n/a
43	CHD2	chr7:6413733-6414757	GM12878	blood:	n/a	n/a
44	CHD2	chr7:6413389-6413424	GM12878	blood:	n/a	n/a
45	CHD2	chr7:6413748-6414625	Hela-S3	cervix:	n/a	n/a
46	CREB1	chr7:6413724-6414273	A549	lung:	n/a	n/a
47	CREB1	chr7:6413919-6414113	A549	lung:	n/a	n/a
48	CREB1	chr7:6413791-6414166	H1-hESC	embryonic stem cell:	n/a	n/a
49	CREB1	chr7:6413741-6414242	GM12878	blood:	n/a	n/a
50	CTCF	chr7:6413240-6413390	WERI-Rb-1	eye:	n/a	n/a

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:6413880-6413930	GM06990	blood:	n/a
2	chr7:6413880-6413930	GM06990	blood:	n/a
3	chr7:6414209-6414259	GM12878	blood:	n/a
4	chr7:6413861-6413911	HUVEC	blood vessel:	n/a
5	chr7:6413880-6413930	RPTEC	kidney:	n/a
6	chr7:6414708-6414758	HL-60	blood:	n/a
7	chr7:6413861-6413911	HMEC	breast:	n/a
8	chr7:6415217-6415267	BJ	skin:	n/a
9	chr7:6414202-6414252	HEK293	kidney:	embryo
10	chr7:6414202-6414252	HCT-116	colon:	n/a
11	chr7:6414623-6414673	AG04450	lung:	fetal
12	chr7:6414196-6414246	GM12891	blood:	n/a
13	chr7:6414623-6414673	RPTEC	kidney:	n/a
14	chr7:6414196-6414246	HAEpiC	amniotic membrane:	n/a
15	chr7:6414708-6414758	PrEC	prostate:	n/a
16	chr7:6414623-6414673	Hepatocyte	liver:	n/a
17	chr7:6414623-6414673	MCF10A-Er-Src	breast:	n/a
18	chr7:6413861-6413911	Hela-S3	cervix:	n/a
19	chr7:6414202-6414252	SK-N-SH	brain:	n/a
20	chr7:6414209-6414259	HAEpiC	amniotic membrane:	n/a
21	chr7:6414196-6414246	HEK293	kidney:	embryo
22	chr7:6413877-6413927	MCF10A-Er-Src	breast:	n/a
23	chr7:6413861-6413911	AoSMC	blood vessel:	n/a
24	chr7:6413877-6413927	Hela-S3	cervix:	n/a
25	chr7:6414196-6414246	ovcar-3	ovarian:	n/a
26	chr7:6413880-6413930	ovcar-3	ovarian:	n/a
27	chr7:6414708-6414758	HCT-116	colon:	n/a
28	chr7:6415217-6415267	K562	blood:	n/a
29	chr7:6413877-6413927	NHDF-neo	bronchial:	n/a
30	chr7:6414209-6414259	AG10803	skin:	n/a
31	chr7:6413877-6413927	HRPEpiC	eye:	n/a
32	chr7:6414196-6414246	U87	brain:	n/a
33	chr7:6413877-6413927	NH-A	brain:	n/a
34	chr7:6414623-6414673	NH-A	brain:	n/a
35	chr7:6414708-6414758	U87	brain:	n/a
36	chr7:6415217-6415267	ProgFib	skin:	n/a
37	chr7:6415217-6415267	U87	brain:	n/a
38	chr7:6414202-6414252	Hela-S3	cervix:	n/a
39	chr7:6414196-6414246	HMEC	breast:	n/a
40	chr7:6414708-6414758	LNCaP	prostate:	n/a
41	chr7:6414623-6414673	NHDF-neo	bronchial:	n/a
42	chr7:6413880-6413930	PFSK-1	brain:	n/a
43	chr7:6414708-6414758	AG10803	skin:	n/a
44	chr7:6414623-6414673	HCM	heart:	n/a
45	chr7:6414196-6414246	HEEpiC	esophagus:	n/a
46	chr7:6413880-6413930	GM19239	blood:	n/a
47	chr7:6414623-6414673	GM12891	blood:	n/a
48	chr7:6414202-6414252	NHDF-neo	bronchial:	n/a
49	chr7:6413861-6413911	NH-A	brain:	n/a
50	chr7:6413861-6413911	AG09319	gingival:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:6387187..6388731-chr7:6415190..6416736,2	K562	blood:
2	chr7:6414882..6417650-chr7:6542443..6546000,3	MCF-7	breast:
3	chr19:38806188..38807107-chr7:6414078..6414612,2	Hela-S3	cervix:
4	chr7:6412666..6416399-chr7:6429961..6432840,4	MCF-7	breast:
5	chr7:6412857..6414877-chr7:6485942..6488132,2	MCF-7	breast:
6	chr7:6415178..6416975-chr7:6426266..6428182,2	MCF-7	breast:
7	chr7:6413960..6415587-chr7:6430551..6433223,4	K562	blood:
8	chr7:6413883..6414425-chr8:94752998..94753666,2	Hela-S3	cervix:
9	chr7:6412517..6417079-chr7:6439604..6446019,8	MCF-7	breast:
10	chr7:6413015..6417903-chr7:6435938..6439469,5	MCF-7	breast:
11	chr7:6412561..6415167-chr8:145131174..145134036,2	MCF-7	breast:
12	chr14:24740456..24741347-chr7:6414145..6414731,2	Hela-S3	cervix:
13	chr7:6310725..6312409-chr7:6412991..6414709,2	K562	blood:
14	chr7:6387247..6388755-chr7:6413232..6415374,2	MCF-7	breast:

No data

Variant related genes	Relation type
RAC1	TF binding region
RAC1	CpG island
ENSG00000008256	chromatin interactions
ENSG00000100949	chromatin interactions
ENSG00000183808	chromatin interactions
ENSG00000167645	chromatin interactions
ENSG00000164535	chromatin interactions
ENSG00000178896	chromatin interactions
ENSG00000136238	chromatin interactions
ENSG00000253848	chromatin interactions
ENSG00000178397	chromatin interactions

Extended variants
information (count: 123 )
Associated
traits (count: 77 )

Variant overlapped rSNPs/rCNVs (count:123 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs147459284	chr7:6413080-6413081	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
2	rs569746156	chr7:6413136-6413137	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
3	rs148524709	chr7:6413140-6413141	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
4	rs549839537	chr7:6413170-6413171	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
5	rs376939685	chr7:6413183-6413184	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
6	rs549590588	chr7:6413228-6413229	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
7	rs567962918	chr7:6413242-6413243	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs535294687	chr7:6413255-6413256	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs112152795	chr7:6413263-6413264	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs553107498	chr7:6413289-6413290	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs577938583	chr7:6413296-6413297	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs538632204	chr7:6413309-6413310	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs557460826	chr7:6413323-6413324	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs575324440	chr7:6413362-6413363	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs113953688	chr7:6413407-6413408	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs59499291	chr7:6413422-6413423	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs182094710	chr7:6413466-6413467	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs573611534	chr7:6413516-6413517	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs541287662	chr7:6413523-6413524	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs553075018	chr7:6413590-6413591	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs560354503	chr7:6413631-6413632	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs2742122	chr7:6413687-6413688	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs544664143	chr7:6413692-6413693	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs563414454	chr7:6413709-6413710	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs530572872	chr7:6413710-6413711	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs551693527	chr7:6413747-6413748	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs549606992	chr7:6413751-6413752	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs567825291	chr7:6413776-6413777	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs10232409	chr7:6413792-6413793	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs547298139	chr7:6413816-6413817	Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs570014716	chr7:6413838-6413839	Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs571830188	chr7:6413862-6413863	Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs368010071	chr7:6413874-6413875	Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
34	rs35887529	chr7:6413911-6413912	Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs185292900	chr7:6413935-6413936	Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
36	rs569014857	chr7:6413951-6413952	Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
37	rs35142022	chr7:6413996-6413997	Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
38	rs545489184	chr7:6414045-6414046	Weak transcription Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
39	rs527901658	chr7:6414053-6414054	Weak transcription Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
40	rs534921572	chr7:6414059-6414060	Weak transcription Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
41	rs2551989	chr7:6414069-6414070	Weak transcription Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
42	rs35144878	chr7:6414070-6414071	Weak transcription Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
43	rs2551990	chr7:6414074-6414075	Weak transcription Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
44	rs34932801	chr7:6414078-6414079	Weak transcription Active TSS	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs540847761	chr7:6414084-6414085	Weak transcription Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
46	rs553267639	chr7:6414151-6414152	Weak transcription Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
47	rs577852049	chr7:6414182-6414183	Weak transcription Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
48	rs545036179	chr7:6414335-6414336	Weak transcription Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
49	rs35917954	chr7:6414375-6414376	Weak transcription Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
50	rs530637147	chr7:6414421-6414422	Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:77)

Disease	PMID	Source
Lynch syndrome	22585707	CNVD
Follicular lymphoma	20505157	CNVD
Breast cancer	16397240	CNVD
Raine Syndrome	17924334	CNVD
Diffuse large b-cell lymphoma	21266526	CNVD
Melanoma	18172304	CNVD
Sudden cardiac death	19188705	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Glioma	18556773	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Bladder cancer	21909424	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	21045282	CNVD
Disorders of sex development	21048976	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	21525872	CNVD
Ependymoma	20639864	CNVD
Autism	20685689	CNVD
Amyotrophic lateral sclerosis	20685689	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:302 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:6407800-6413600	Weak transcription	HUVEC	blood vessel
2	chr7:6408000-6413400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr7:6408200-6413200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr7:6408200-6413400	Weak transcription	Fetal Intestine Large	intestine
5	chr7:6408400-6413200	Weak transcription	Fetal Intestine Small	intestine
6	chr7:6409800-6413600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr7:6409800-6414000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr7:6412200-6413600	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr7:6412400-6413200	Enhancers	Primary T cells fromperipheralblood	blood
10	chr7:6412400-6413400	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr7:6412400-6413800	Active TSS	ES-I3 Cell Line	embryonic stem cell
12	chr7:6412600-6413200	Enhancers	Duodenum Mucosa	Duodenum
13	chr7:6412600-6413400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
14	chr7:6412600-6413400	Enhancers	Primary T helper naive cells from peripheral blood	blood
15	chr7:6412800-6413200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
16	chr7:6412800-6413200	Enhancers	Primary T cells from cord blood	blood
17	chr7:6412800-6413200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
18	chr7:6412800-6413200	Enhancers	Primary T helper cells PMA-I stimulated	--
19	chr7:6412800-6413200	Enhancers	Fetal Thymus	thymus
20	chr7:6412800-6413200	Enhancers	Thymus	Thymus
21	chr7:6412800-6413400	Flanking Active TSS	Primary B cells from peripheral blood	blood
22	chr7:6412800-6413400	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr7:6412800-6414000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
24	chr7:6412800-6415000	Active TSS	Primary T killer naive cells fromperipheralblood	blood
25	chr7:6412800-6415000	Active TSS	Monocytes-CD14+_RO01746	blood
26	chr7:6412800-6416600	Active TSS	Rectal Mucosa Donor 29	rectum
27	chr7:6413000-6413200	Active TSS	Primary B cells from cord blood	blood
28	chr7:6413000-6413200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
29	chr7:6413000-6413200	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
30	chr7:6413000-6413200	Enhancers	Dnd41	blood
31	chr7:6413000-6413600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
32	chr7:6413000-6413600	Flanking Active TSS	Placenta	Placenta
33	chr7:6413000-6414800	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr7:6413000-6415600	Active TSS	Colonic Mucosa	Colon
35	chr7:6413000-6416400	Active TSS	K562	blood
36	chr7:6413000-6416600	Active TSS	GM12878-XiMat	blood
37	chr7:6413000-6416800	Active TSS	iPS-15b Cell Line	embryonic stem cell
38	chr7:6413200-6413400	Flanking Active TSS	Primary B cells from cord blood	blood
39	chr7:6413200-6413400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
40	chr7:6413200-6413400	Enhancers	Fetal Intestine Small	intestine
41	chr7:6413200-6413600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
42	chr7:6413200-6413600	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
43	chr7:6413200-6413600	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
44	chr7:6413200-6413600	Flanking Active TSS	Fetal Thymus	thymus
45	chr7:6413200-6413600	Flanking Active TSS	Dnd41	blood
46	chr7:6413200-6413800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
47	chr7:6413200-6413800	Active TSS	A549	lung
48	chr7:6413200-6414600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr7:6413200-6414800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
50	chr7:6413200-6414800	Active TSS	Primary T helper 17 cells PMA-I stimulated	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links