Variant report

Variant	esv3397065
Chromosome Location	chr1:197545083-197637033
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:628)
CpG islands
(count:61)
Chromatin interactive
region (count:57)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:628 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:197588203-197588456	K562	blood:	n/a	n/a
2	ARID3A	chr1:197573620-197573856	HepG2	liver:	n/a	n/a
3	ARID3A	chr1:197589421-197590390	HepG2	liver:	n/a	n/a
4	ARID3A	chr1:197584280-197585143	HepG2	liver:	n/a	chr1:197584674-197584690 chr1:197584673-197584689
5	ARID3A	chr1:197588227-197588560	HepG2	liver:	n/a	n/a
6	ARID3A	chr1:197554837-197555391	HepG2	liver:	n/a	n/a
7	ARID3A	chr1:197611757-197611859	K562	blood:	n/a	n/a
8	ATF1	chr1:197607591-197607763	K562	blood:	n/a	n/a
9	ATF1	chr1:197608561-197608593	K562	blood:	n/a	n/a
10	ATF1	chr1:197628585-197628753	K562	blood:	n/a	n/a
11	ATF1	chr1:197584346-197584582	K562	blood:	n/a	n/a
12	BACH1	chr1:197564687-197564784	K562	blood:	n/a	n/a
13	BHLHE40	chr1:197564505-197564788	K562	blood:	n/a	n/a
14	BRCA1	chr1:197583197-197583208	Hela-S3	cervix:	n/a	n/a
15	BRCA1	chr1:197558816-197558975	Hela-S3	cervix:	n/a	n/a
16	CCNT2	chr1:197628837-197629021	K562	blood:	n/a	n/a
17	CCNT2	chr1:197564397-197564676	K562	blood:	n/a	n/a
18	CCNT2	chr1:197610891-197610908	K562	blood:	n/a	n/a
19	CEBPB	chr1:197584007-197584657	HepG2	liver:	n/a	n/a
20	CEBPB	chr1:197589731-197590064	HepG2	liver:	n/a	chr1:197589796-197589807
21	CEBPB	chr1:197636120-197636397	HepG2	liver:	n/a	chr1:197636214-197636225
22	CEBPB	chr1:197636004-197636363	ECC-1	luminal epithelium:	n/a	chr1:197636214-197636225
23	CEBPB	chr1:197585929-197586129	A549	lung:	n/a	chr1:197586019-197586030 chr1:197586019-197586032
24	CEBPB	chr1:197636118-197636325	A549	lung:	n/a	chr1:197636214-197636225
25	CEBPB	chr1:197584401-197584521	K562	blood:	n/a	n/a
26	CEBPB	chr1:197573357-197573751	HepG2	liver:	n/a	n/a
27	CEBPB	chr1:197583907-197584684	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr1:197636102-197636374	Hela-S3	cervix:	n/a	chr1:197636214-197636225
29	CEBPB	chr1:197551663-197551738	HepG2	liver:	n/a	chr1:197551687-197551696 chr1:197551685-197551696
30	CEBPB	chr1:197632235-197632437	K562	blood:	n/a	n/a
31	CEBPB	chr1:197583967-197584161	K562	blood:	n/a	n/a
32	CEBPB	chr1:197589694-197590140	HepG2	liver:	n/a	chr1:197589796-197589807
33	CEBPB	chr1:197589694-197589989	HepG2	liver:	n/a	chr1:197589796-197589807
34	CEBPB	chr1:197636033-197636389	H1-hESC	embryonic stem cell:	n/a	chr1:197636214-197636225
35	CEBPB	chr1:197636048-197636384	A549	lung:	n/a	chr1:197636214-197636225
36	CEBPB	chr1:197636115-197636382	MCF-7	breast:	n/a	chr1:197636214-197636225
37	CEBPB	chr1:197636064-197636371	IMR90	lung:	n/a	chr1:197636214-197636225
38	CEBPB	chr1:197545329-197545516	HepG2	liver:	n/a	chr1:197545365-197545376 chr1:197545364-197545377
39	CEBPB	chr1:197589760-197589978	HepG2	liver:	n/a	chr1:197589796-197589807
40	CEBPB	chr1:197635996-197636379	ECC-1	luminal epithelium:	n/a	chr1:197636214-197636225
41	CEBPB	chr1:197585966-197586134	K562	blood:	n/a	chr1:197586019-197586030 chr1:197586019-197586032
42	CEBPB	chr1:197632175-197632514	Hela-S3	cervix:	n/a	n/a
43	CEBPB	chr1:197589743-197590037	A549	lung:	n/a	chr1:197589796-197589807
44	CEBPB	chr1:197583360-197583673	IMR90	lung:	n/a	chr1:197583520-197583531 chr1:197583519-197583530 chr1:197583521-197583530
45	CEBPB	chr1:197636043-197636378	K562	blood:	n/a	chr1:197636214-197636225
46	CEBPB	chr1:197583382-197583696	HepG2	liver:	n/a	chr1:197583520-197583531 chr1:197583519-197583530 chr1:197583521-197583530
47	CEBPD	chr1:197589740-197589953	HepG2	liver:	n/a	n/a
48	CEBPD	chr1:197564406-197564826	K562	blood:	n/a	n/a
49	CHD1	chr1:197584121-197584666	IMR90	lung:	n/a	n/a
50	CHD2	chr1:197589839-197590286	HepG2	liver:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:197564458-197564508	NT2-D1	testis:	n/a
2	chr1:197564458-197564508	HAEpiC	amniotic membrane:	n/a
3	chr1:197564458-197564508	HCM	heart:	n/a
4	chr1:197564458-197564508	MCF10A-Er-Src	breast:	n/a
5	chr1:197564458-197564508	AG04450	lung:	fetal
6	chr1:197564458-197564508	CMK	blood:	n/a
7	chr1:197564458-197564508	HCT-116	colon:	n/a
8	chr1:197564458-197564508	GM12892	blood:	n/a
9	chr1:197564458-197564508	Jurkat	blood:	n/a
10	chr1:197564458-197564508	HPAEpiC	pulmonary alveolar:	n/a
11	chr1:197564458-197564508	HL-60	blood:	n/a
12	chr1:197564458-197564508	SAEC	small airway:	n/a
13	chr1:197564458-197564508	NB4	blood:	n/a
14	chr1:197564458-197564508	HRE	kidney:	n/a
15	chr1:197564458-197564508	U87	brain:	n/a
16	chr1:197564458-197564508	BE2_C	brain:	n/a
17	chr1:197564458-197564508	Hela-S3	cervix:	n/a
18	chr1:197564458-197564508	NHDF-neo	bronchial:	n/a
19	chr1:197564458-197564508	Hepatocyte	liver:	n/a
20	chr1:197564458-197564508	HCPEpiC	choroid plexus:	n/a
21	chr1:197564458-197564508	HUVEC	blood vessel:	n/a
22	chr1:197564458-197564508	HepG2	liver:	n/a
23	chr1:197564458-197564508	NHBE	bronchial:	n/a
24	chr1:197564458-197564508	SK-N-SH	brain:	n/a
25	chr1:197564458-197564508	AG09319	gingival:	n/a
26	chr1:197564458-197564508	GM12878	blood:	n/a
27	chr1:197564458-197564508	PrEC	prostate:	n/a
28	chr1:197564458-197564508	LNCaP	prostate:	n/a
29	chr1:197564458-197564508	HIPEpiC	eye:	n/a
30	chr1:197564458-197564508	HRCEpiC	kidney:	n/a
31	chr1:197564458-197564508	PANC-1	pancreas:	n/a
32	chr1:197564458-197564508	AG04449	skin:	fetal
33	chr1:197564458-197564508	HEEpiC	esophagus:	n/a
34	chr1:197564458-197564508	NH-A	brain:	n/a
35	chr1:197564458-197564508	AG09309	skin:	n/a
36	chr1:197564458-197564508	ProgFib	skin:	n/a
37	chr1:197564458-197564508	HCF	heart:	n/a
38	chr1:197564458-197564508	K562	blood:	n/a
39	chr1:197564458-197564508	AoSMC	blood vessel:	n/a
40	chr1:197564458-197564508	ECC-1	luminal epithelium:	n/a
41	chr1:197564458-197564508	IMR90	lung:	fetal
42	chr1:197564458-197564508	GM06990	blood:	n/a
43	chr1:197564458-197564508	HNPCEpiC	eye:	n/a
44	chr1:197564458-197564508	RPTEC	kidney:	n/a
45	chr1:197564458-197564508	MCF-7	breast:	n/a
46	chr1:197564458-197564508	AG10803	skin:	n/a
47	chr1:197564458-197564508	GM12891	blood:	n/a
48	chr1:197564458-197564508	PFSK-1	brain:	n/a
49	chr1:197564458-197564508	SKMC	muscle:	n/a
50	chr1:197564458-197564508	SK-N-SH_RA	brain:	n/a

(count:57 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr1:197576695..197578475-chr1:197584193..197586595,2	K562	blood:
2	chr1:197544507..197547050-chr1:197552662..197555146,2	K562	blood:
3	chr1:197610998..197613034-chr1:197615077..197617017,2	MCF-7	breast:
4	chr1:197584245..197585109-chr1:197893726..197894310,2	MCF-7	breast:
5	chr1:197606152..197607793-chr1:197638332..197640203,2	MCF-7	breast:
6	chr1:197584187..197584859-chr1:197884586..197885167,2	MCF-7	breast:
7	chr1:197583946..197585840-chr1:197589474..197591778,2	MCF-7	breast:
8	chr1:197584970..197586842-chr1:197870772..197872355,2	K562	blood:
9	chr1:197572305..197575157-chr1:197576416..197578887,2	MCF-7	breast:
10	chr1:197570884..197572523-chr1:197584581..197587498,2	K562	blood:
11	chr1:197572305..197575157-chr1:197576416..197578887,2	MCF-7	breast:
12	chr1:197600281..197603768-chr1:197604210..197606780,3	K562	blood:
13	chr1:197581999..197584839-chr1:197586901..197591270,6	K562	blood:
14	chr1:197634768..197637407-chr1:197639641..197641579,2	K562	blood:
15	chr1:197580216..197582177-chr1:197584610..197586308,2	K562	blood:
16	chr1:197588330..197588863-chr1:197837795..197838473,2	MCF-7	breast:
17	chr1:197601531..197603659-chr1:197870194..197872413,2	K562	blood:
18	chr1:197575772..197578195-chr1:197579727..197581675,2	K562	blood:
19	chr1:197580036..197581716-chr1:197583304..197586110,2	K562	blood:
20	chr1:197555789..197558080-chr1:197564045..197566228,2	K562	blood:
21	chr1:197566243..197568048-chr1:197572339..197574804,2	K562	blood:
22	chr1:197584116..197584704-chr1:197837725..197838549,2	K562	blood:
23	chr1:197613381..197615580-chr1:197616479..197618755,2	K562	blood:
24	chr1:197610998..197613034-chr1:197615077..197617017,2	MCF-7	breast:
25	chr1:197555789..197558080-chr1:197564045..197566228,2	K562	blood:
26	chr1:197561680..197564518-chr1:198126144..198127682,2	K562	blood:
27	chr1:197583946..197585840-chr1:197589474..197591778,2	MCF-7	breast:
28	chr1:197536074..197537804-chr1:197566047..197569001,2	MCF-7	breast:
29	chr1:197631236..197632754-chr1:197743996..197746221,2	K562	blood:
30	chr1:197554792..197556654-chr1:197563284..197565204,2	MCF-7	breast:
31	chr1:197600281..197603768-chr1:197604210..197606780,3	K562	blood:
32	chr1:197588307..197588845-chr1:197837719..197838502,3	MCF-7	breast:
33	chr1:197580036..197581716-chr1:197583304..197586110,2	K562	blood:
34	chr1:197570884..197572523-chr1:197584581..197587498,2	K562	blood:
35	chr1:197580216..197582177-chr1:197584610..197586308,2	K562	blood:
36	chr1:197584129..197584940-chr1:197893429..197894167,4	MCF-7	breast:
37	chr1:197481645..197483938-chr1:197564288..197566094,2	K562	blood:
38	chr1:197575772..197578195-chr1:197579727..197581675,2	K562	blood:
39	chr1:197620433..197622127-chr1:197700140..197702120,2	K562	blood:
40	chr1:197581999..197584839-chr1:197586901..197591270,6	K562	blood:
41	chr1:197614829..197617182-chr1:197621263..197623211,2	K562	blood:
42	chr1:197628715..197631555-chr1:197637374..197639292,2	MCF-7	breast:
43	chr1:197572087..197573946-chr1:197577397..197579065,2	K562	blood:
44	chr1:197544507..197547050-chr1:197552662..197555146,2	K562	blood:
45	chr1:197572087..197573946-chr1:197577397..197579065,2	K562	blood:
46	chr1:197600215..197602607-chr1:197603405..197605600,2	MCF-7	breast:
47	chr1:197583852..197585003-chr1:197884312..197885694,6	MCF-7	breast:
48	chr1:197613381..197615580-chr1:197616479..197618755,2	K562	blood:
49	chr1:197623895..197625439-chr1:197644828..197646522,2	K562	blood:
50	chr1:197576695..197578475-chr1:197584193..197586595,2	K562	blood:

No data

Variant related genes	Relation type
DENND1B	TF binding region
DENND1B	CpG island
ENSG00000143355	chromatin interactions
ENSG00000213047	chromatin interactions
ENSG00000151414	chromatin interactions
ENSG00000203724	chromatin interactions

Extended variants
information (count: 3051 )
Associated
traits (count: 97 )

Variant overlapped rSNPs/rCNVs (count:3051 , 50 per page) page: 1 2 3 4 5 6 7 ... 62

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs143678096	chr1:197545088-197545089	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs557550270	chr1:197545124-197545125	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs192748051	chr1:197545149-197545150	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs7526846	chr1:197545199-197545200	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs558221266	chr1:197545219-197545220	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs184594908	chr1:197545223-197545224	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs546452985	chr1:197545224-197545225	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs74668968	chr1:197545231-197545232	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs540704598	chr1:197545236-197545237	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs187194501	chr1:197545256-197545257	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs538524092	chr1:197545285-197545286	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs544519229	chr1:197545289-197545290	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs191948937	chr1:197545306-197545307	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs10922256	chr1:197545307-197545308	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs79379644	chr1:197545340-197545341	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs184506067	chr1:197545349-197545350	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs370137682	chr1:197545351-197545352	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs527310690	chr1:197545375-197545376	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs549014092	chr1:197545383-197545384	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs567595917	chr1:197545397-197545398	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs571888338	chr1:197545425-197545426	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs189197590	chr1:197545428-197545429	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs148911772	chr1:197545466-197545467	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs111932394	chr1:197545470-197545471	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs373260592	chr1:197545505-197545506	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs377494997	chr1:197545558-197545559	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs12730401	chr1:197545572-197545573	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs536534560	chr1:197545608-197545609	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs556115252	chr1:197545665-197545666	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs10922257	chr1:197545720-197545721	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs575965341	chr1:197545726-197545727	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs371516250	chr1:197545729-197545730	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs148275898	chr1:197545744-197545745	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs555431927	chr1:197545745-197545746	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs573228495	chr1:197545799-197545800	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs540640927	chr1:197545806-197545807	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs555822802	chr1:197545812-197545813	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs574098729	chr1:197545867-197545868	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs544769367	chr1:197545889-197545890	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs74845229	chr1:197545931-197545932	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs182001143	chr1:197545950-197545951	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs141823586	chr1:197546037-197546038	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs1998711	chr1:197546093-197546094	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs560414560	chr1:197546102-197546103	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs150621477	chr1:197546120-197546121	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs548742836	chr1:197546127-197546128	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs544597093	chr1:197546147-197546148	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs531343147	chr1:197546150-197546151	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs549865167	chr1:197546222-197546223	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs571442865	chr1:197546226-197546227	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:97)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	21611746	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	19010865	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
small cell lung cancer	20016488	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Pancreatic cancer	17952125	CNVD
Urothelial cell carcinoma	18451213	CNVD
Glioblastoma multiforme	19435819	CNVD
Glioblastoma multiforme	22291905	CNVD
Lung adenocarcinoma	21935476	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	20472715	CNVD
Multiple myeloma	16461302	CNVD
Leukoplakia	24403051	CNVD
Macular degeneration	22558131	CNVD
Alzheimer''s disease	21403675	CNVD
van der Woude syndrome	22470819	CNVD
van der Woude syndrome	20818247	CNVD
T-cell lymphomas	19863542	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:669 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:197506800-197564600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr1:197508400-197602400	Weak transcription	Left Ventricle	heart
3	chr1:197526800-197563000	Weak transcription	Osteobl	bone
4	chr1:197529800-197548800	Weak transcription	Right Ventricle	heart
5	chr1:197537000-197574600	Weak transcription	NHDF-Ad	bronchial
6	chr1:197537200-197548600	Weak transcription	Adipose Nuclei	Adipose
7	chr1:197537400-197550400	Weak transcription	Fetal Lung	lung
8	chr1:197537400-197602200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
9	chr1:197537800-197546000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
10	chr1:197537800-197550400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr1:197537800-197585600	Weak transcription	Primary T helper cells PMA-I stimulated	--
12	chr1:197538000-197546800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr1:197538000-197554000	Weak transcription	Colon Smooth Muscle	Colon
14	chr1:197538600-197563600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr1:197538800-197548600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr1:197539000-197545400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr1:197539000-197545800	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr1:197539000-197554400	Weak transcription	Primary B cells from peripheral blood	blood
19	chr1:197539000-197556600	Weak transcription	Fetal Kidney	kidney
20	chr1:197539200-197545200	Weak transcription	Rectal Smooth Muscle	rectum
21	chr1:197540000-197554600	Weak transcription	Stomach Smooth Muscle	stomach
22	chr1:197540600-197545200	Weak transcription	Dnd41	blood
23	chr1:197541800-197545200	Weak transcription	Primary hematopoietic stem cells	blood
24	chr1:197541800-197546800	Weak transcription	Aorta	Aorta
25	chr1:197541800-197549400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr1:197541800-197551000	Weak transcription	Primary T helper cells fromperipheralblood	blood
27	chr1:197541800-197566000	Weak transcription	Ovary	ovary
28	chr1:197541800-197602400	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr1:197541800-197602600	Weak transcription	Fetal Thymus	thymus
30	chr1:197542000-197545400	Weak transcription	Monocytes-CD14+_RO01746	blood
31	chr1:197542000-197545600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr1:197542000-197547400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr1:197542000-197547600	Weak transcription	Thymus	Thymus
34	chr1:197542000-197548800	Weak transcription	Fetal Stomach	stomach
35	chr1:197542000-197549000	Weak transcription	Primary neutrophils fromperipheralblood	blood
36	chr1:197542000-197549000	Weak transcription	Fetal Muscle Leg	muscle
37	chr1:197542000-197550200	Weak transcription	Primary monocytes fromperipheralblood	blood
38	chr1:197542000-197550200	Weak transcription	Fetal Intestine Large	intestine
39	chr1:197542000-197552200	Weak transcription	Primary T cells from cord blood	blood
40	chr1:197542000-197554000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
41	chr1:197542000-197555800	Weak transcription	Sigmoid Colon	Sigmoid Colon
42	chr1:197542000-197557000	Weak transcription	Fetal Intestine Small	intestine
43	chr1:197542000-197559600	Weak transcription	Rectal Mucosa Donor 29	rectum
44	chr1:197542000-197559800	Weak transcription	Liver	Liver
45	chr1:197542000-197568000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
46	chr1:197542000-197569200	Weak transcription	Pancreas	Pancrea
47	chr1:197542000-197571400	Weak transcription	Esophagus	oesophagus
48	chr1:197542000-197574400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
49	chr1:197542000-197609000	Weak transcription	Colonic Mucosa	Colon
50	chr1:197542000-197626400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood

The 2.0 version of rSNPBase

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