Variant report

Variant esv3398505
Chromosome Location chr21:17499130-17527355
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:17498000-17499400 Enhancers NHDF-Ad bronchial
2 chr21:17498000-17500800 Weak transcription Osteobl bone
3 chr21:17498000-17506800 Weak transcription Adipose Nuclei Adipose
4 chr21:17498400-17499200 Weak transcription Hela-S3 cervix
5 chr21:17498800-17499400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr21:17499200-17500000 Active TSS Hela-S3 cervix
7 chr21:17504800-17505000 ZNF genes & repeats Fetal Brain Female brain
8 chr21:17504800-17505400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr21:17504800-17505600 Weak transcription Brain Germinal Matrix brain
10 chr21:17505000-17505600 Weak transcription Fetal Brain Female brain
11 chr21:17505000-17507400 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr21:17505400-17505800 Genic enhancers Cortex derived primary cultured neurospheres brain
13 chr21:17505600-17505800 ZNF genes & repeats Brain Germinal Matrix brain
14 chr21:17505800-17507200 Enhancers Cortex derived primary cultured neurospheres brain
15 chr21:17506200-17507400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr21:17506600-17507000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr21:17506800-17507400 Enhancers Adipose Nuclei Adipose
18 chr21:17507000-17507400 Enhancers Brain Angular Gyrus brain
19 chr21:17517200-17518600 Enhancers Brain Anterior Caudate brain
20 chr21:17517600-17518200 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr21:17517600-17518400 Enhancers Brain Cingulate Gyrus brain
22 chr21:17517800-17518400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr21:17517800-17518400 Enhancers Brain Inferior Temporal Lobe brain
24 chr21:17517800-17518600 Enhancers Brain Hippocampus Middle brain
25 chr21:17517800-17518600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
26 chr21:17518000-17518400 Enhancers Brain Germinal Matrix brain
27 chr21:17518000-17518400 Enhancers Ovary ovary
28 chr21:17518000-17518600 Enhancers Brain Substantia Nigra brain
29 chr21:17518200-17526800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr21:17518800-17519000 ZNF genes & repeats Gastric stomach
31 chr21:17519200-17520000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr21:17522600-17526600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr21:17526000-17528400 Enhancers Cortex derived primary cultured neurospheres brain
34 chr21:17526600-17526800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr21:17526600-17527200 Enhancers Brain Germinal Matrix brain
36 chr21:17526800-17527200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr21:17526800-17527200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
38 chr21:17526800-17527200 Enhancers Brain Anterior Caudate brain
39 chr21:17526800-17527800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr21:17526800-17528000 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr21:17526800-17528000 Enhancers HUES48 Cell Line embryonic stem cell
42 chr21:17526800-17528000 Enhancers HUES64 Cell Line embryonic stem cell
43 chr21:17526800-17528200 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr21:17526800-17528200 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr21:17526800-17528400 Enhancers Brain Inferior Temporal Lobe brain
46 chr21:17527000-17527800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr21:17527000-17528200 Enhancers HUES6 Cell Line embryonic stem cell
48 chr21:17527000-17528200 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr21:17527000-17528400 Enhancers H1 Cell Line embryonic stem cell
50 chr21:17527200-17528000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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