Variant report

Variant	esv3399978
Chromosome Location	chr4:3342179-3344577
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:3344203-3344571	HepG2	liver:	n/a	n/a
2	BHLHE40	chr4:3344223-3344438	HepG2	liver:	n/a	n/a
3	BHLHE40	chr4:3344175-3344470	HepG2	liver:	n/a	n/a
4	BHLHE40	chr4:3344203-3344494	A549	lung:	n/a	n/a
5	BHLHE40	chr4:3344140-3344381	K562	blood:	n/a	n/a
6	BHLHE40	chr4:3344231-3344498	GM12878	blood:	n/a	n/a
7	BHLHE40	chr4:3344062-3344569	HepG2	liver:	n/a	n/a
8	CTCF	chr4:3342625-3342798	H1-hESC	embryonic stem cell:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
9	CTCF	chr4:3342580-3342730	HepG2	liver:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
10	CTCF	chr4:3342524-3342842	T-47D	breast:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
11	CTCF	chr4:3342628-3342781	Kidney_OC	kidney:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
12	CTCF	chr4:3342611-3342800	MCF-7	breast:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
13	CTCF	chr4:3342640-3342790	HEEpiC	esophagus:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
14	CTCF	chr4:3342672-3342746	K562	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
15	CTCF	chr4:3342600-3342750	HRE	kidney:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
16	CTCF	chr4:3342617-3342799	MCF-7	breast:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
17	CTCF	chr4:3342577-3342854	LNCaP	prostate:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
18	CTCF	chr4:3342660-3342810	MCF-7	breast:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
19	CTCF	chr4:3342542-3342802	K562	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
20	CTCF	chr4:3342610-3342834	NHEK	skin:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
21	CTCF	chr4:3342640-3342790	RPTEC	kidney:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
22	CTCF	chr4:3342714-3342730	Gliobla	brain:	n/a	n/a
23	CTCF	chr4:3342632-3342797	GM12892	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
24	CTCF	chr4:3342693-3342759	GM19240	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
25	CTCF	chr4:3342660-3342810	HBMEC	blood vessel:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
26	CTCF	chr4:3342596-3342793	HepG2	liver:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
27	CTCF	chr4:3342680-3342830	NHEK	skin:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
28	CTCF	chr4:3342557-3342849	LNCaP	prostate:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
29	CTCF	chr4:3342620-3342770	HMEC	breast:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
30	CTCF	chr4:3342605-3342747	K562	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
31	CTCF	chr4:3342580-3342730	NHEK	skin:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
32	CTCF	chr4:3342683-3342712	GM12878	blood:	n/a	n/a
33	CTCF	chr4:3342620-3342770	AG04450	lung:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
34	CTCF	chr4:3342640-3342790	WERI-Rb-1	eye:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
35	CTCF	chr4:3342666-3342757	Hela-S3	cervix:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
36	CTCF	chr4:3342658-3342752	HepG2	liver:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
37	CTCF	chr4:3342620-3342770	A549	lung:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
38	CTCF	chr4:3342640-3342790	HUVEC	blood vessel:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
39	CTCF	chr4:3342588-3342875	MCF-7	breast:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
40	CTCF	chr4:3342613-3342832	MCF-7	breast:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
41	CTCF	chr4:3342614-3342803	A549	lung:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
42	CTCF	chr4:3342566-3342873	GM12878	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
43	CTCF	chr4:3342600-3342750	Hela-S3	cervix:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
44	CTCF	chr4:3342531-3342810	H1-hESC	embryonic stem cell:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
45	CTCF	chr4:3342673-3342789	GM12891	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
46	CTCF	chr4:3342640-3342790	GM12870	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
47	CTCF	chr4:3342660-3342810	GM12874	blood:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
48	CTCF	chr4:3342520-3342670	HFF-Myc	foreskin:	n/a	n/a
49	CTCF	chr4:3342620-3342770	MCF-7	breast:	n/a	chr4:3342705-3342723 chr4:3342707-3342720
50	CTCF	chr4:3342680-3342830	AG04449	skin:	n/a	chr4:3342705-3342723 chr4:3342707-3342720

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:3344154-3344204	HEK293	kidney:	embryo
2	chr4:3344154-3344204	AoSMC	blood vessel:	n/a
3	chr4:3342725-3342775	GM12892	blood:	n/a
4	chr4:3344154-3344204	PANC-1	pancreas:	n/a
5	chr4:3344154-3344204	HRPEpiC	eye:	n/a
6	chr4:3342725-3342775	NB4	blood:	n/a
7	chr4:3344154-3344204	NHDF-neo	bronchial:	n/a
8	chr4:3344154-3344204	HUVEC	blood vessel:	n/a
9	chr4:3344154-3344204	Caco-2	colon:	n/a
10	chr4:3342725-3342775	CMK	blood:	n/a
11	chr4:3344154-3344204	T-47D	breast:	n/a
12	chr4:3342725-3342775	SK-N-MC	brain:	n/a
13	chr4:3344154-3344204	GM12878	blood:	n/a
14	chr4:3342725-3342775	HRPEpiC	eye:	n/a
15	chr4:3344154-3344204	Hepatocyte	liver:	n/a
16	chr4:3342725-3342775	HCF	heart:	n/a
17	chr4:3344154-3344204	ProgFib	skin:	n/a
18	chr4:3344154-3344204	SK-N-SH_RA	brain:	n/a
19	chr4:3344154-3344204	HCPEpiC	choroid plexus:	n/a
20	chr4:3342725-3342775	AG10803	skin:	n/a
21	chr4:3342725-3342775	HMEC	breast:	n/a
22	chr4:3344154-3344204	K562	blood:	n/a
23	chr4:3342725-3342775	U87	brain:	n/a
24	chr4:3344154-3344204	MCF-7	breast:	n/a
25	chr4:3344154-3344204	SAEC	small airway:	n/a
26	chr4:3342725-3342775	SAEC	small airway:	n/a
27	chr4:3342725-3342775	ovcar-3	ovarian:	n/a
28	chr4:3344154-3344204	AG04449	skin:	fetal
29	chr4:3344154-3344204	SKMC	muscle:	n/a
30	chr4:3342725-3342775	HCPEpiC	choroid plexus:	n/a
31	chr4:3342725-3342775	NHBE	bronchial:	n/a
32	chr4:3342725-3342775	SKMC	muscle:	n/a
33	chr4:3344154-3344204	AG09319	gingival:	n/a
34	chr4:3344154-3344204	Hela-S3	cervix:	n/a
35	chr4:3344154-3344204	GM12892	blood:	n/a
36	chr4:3342725-3342775	GM06990	blood:	n/a
37	chr4:3344154-3344204	GM19239	blood:	n/a
38	chr4:3342725-3342775	T-47D	breast:	n/a
39	chr4:3344154-3344204	U87	brain:	n/a
40	chr4:3344154-3344204	BJ	skin:	n/a
41	chr4:3344154-3344204	HIPEpiC	eye:	n/a
42	chr4:3344154-3344204	NH-A	brain:	n/a
43	chr4:3342725-3342775	Caco-2	colon:	n/a
44	chr4:3344154-3344204	SK-N-SH	brain:	n/a
45	chr4:3344154-3344204	LNCaP	prostate:	n/a
46	chr4:3342725-3342775	MCF-7	breast:	n/a
47	chr4:3342725-3342775	MCF10A-Er-Src	breast:	n/a
48	chr4:3342725-3342775	SK-N-SH	brain:	n/a
49	chr4:3344154-3344204	HCT-116	colon:	n/a
50	chr4:3342725-3342775	HAEpiC	amniotic membrane:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:3341846..3343634-chr4:3447069..3448712,2	MCF-7	breast:
2	chr4:3344329..3346374-chr4:3348112..3350683,2	K562	blood:
3	chr4:3330743..3332280-chr4:3339908..3342252,2	MCF-7	breast:
4	chr4:3338889..3343165-chr4:3463099..3467145,4	MCF-7	breast:
5	chr4:3338818..3342772-chr4:3461368..3467187,7	MCF-7	breast:
6	chr4:3339354..3341969-chr4:3342389..3344050,2	MCF-7	breast:
7	chr4:3343221..3349626-chr4:3462156..3471133,16	MCF-7	breast:
8	chr4:3292758..3295748-chr4:3341243..3344299,3	MCF-7	breast:
9	chr4:3340754..3343218-chr4:3436055..3438880,2	MCF-7	breast:

Variant related genes	Relation type
RGS12	TF binding region
RGS12	CpG island
ENSG00000159788	chromatin interactions
ENSG00000109758	chromatin interactions
ENSG00000175920	chromatin interactions

Extended variants
information (count: 101 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:101 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs118170475	chr4:3342179-3342180	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs573489906	chr4:3342236-3342237	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs184064738	chr4:3342250-3342251	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs373382896	chr4:3342266-3342267	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs570152597	chr4:3342303-3342304	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs536001043	chr4:3342374-3342375	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs75225149	chr4:3342440-3342441	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs77485138	chr4:3342483-3342484	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs142221888	chr4:3342489-3342490	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs142961056	chr4:3342492-3342493	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs11282717	chr4:3342499-3342500	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs60934932	chr4:3342509-3342510	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs112848852	chr4:3342524-3342525	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs533810406	chr4:3342540-3342541	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs554057888	chr4:3342544-3342545	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs144595169	chr4:3342593-3342594	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs576755649	chr4:3342622-3342623	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs138540399	chr4:3342652-3342653	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs541128367	chr4:3342655-3342656	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs192566178	chr4:3342658-3342659	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs577336303	chr4:3342678-3342679	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs115774152	chr4:3342681-3342682	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs541914815	chr4:3342768-3342769	Weak transcription Enhancers Genic enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs562103902	chr4:3342779-3342780	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs572618641	chr4:3342796-3342797	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs541290565	chr4:3342797-3342798	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs564783671	chr4:3342806-3342807	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs533706697	chr4:3342809-3342810	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs550195734	chr4:3342816-3342817	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs563676235	chr4:3342869-3342870	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs529364911	chr4:3342900-3342901	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs534282894	chr4:3342925-3342926	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs113171633	chr4:3342939-3342940	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs568135717	chr4:3342961-3342962	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs150333585	chr4:3342964-3342965	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs185707879	chr4:3342997-3342998	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs71608275	chr4:3343033-3343034	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs190616736	chr4:3343164-3343165	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs111216105	chr4:3343173-3343174	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs6853606	chr4:3343206-3343207	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs565785848	chr4:3343231-3343232	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs184271901	chr4:3343255-3343256	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs568324986	chr4:3343257-3343258	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs6839871	chr4:3343264-3343265	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs188804216	chr4:3343286-3343287	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs181265290	chr4:3343298-3343299	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs561616014	chr4:3343299-3343300	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs185276422	chr4:3343300-3343301	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs190812052	chr4:3343321-3343322	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs61324808	chr4:3343391-3343392	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Retinitis pigmentosa	18421352	CNVD
Wolf-Hirschhorn syndrome	19259404	CNVD
Bladder cancer	19242612	CNVD
Breast cancer	19242612	CNVD
Congenital anomalies of the kidney and urinary tract	19242612	CNVD
abnormal development	18461090	CNVD
Olfactory neuroblastoma	18408657	CNVD
Wilms tumour	21544195	CNVD
Melanoma	20688739	CNVD
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Developmental delay	21147756	CNVD
Urothelial carcinoma	21177765	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	21399695	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:241 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:3301200-3350000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr4:3314400-3348200	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr4:3320000-3344000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr4:3320400-3351800	Weak transcription	Aorta	Aorta
5	chr4:3321000-3347000	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr4:3323600-3344000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr4:3323600-3344800	Weak transcription	Fetal Intestine Large	intestine
8	chr4:3324000-3343600	Weak transcription	HSMM	muscle
9	chr4:3324200-3342600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr4:3324200-3343600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr4:3325200-3342800	Weak transcription	Stomach Smooth Muscle	stomach
12	chr4:3325600-3348000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr4:3326200-3342800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr4:3326400-3343600	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr4:3326400-3343600	Weak transcription	NHLF	lung
16	chr4:3326400-3343800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr4:3326400-3344800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr4:3326400-3348000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr4:3328400-3343600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr4:3330200-3343600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr4:3331000-3343600	Weak transcription	Primary hematopoietic stem cells	blood
22	chr4:3331400-3342400	Weak transcription	Psoas Muscle	Psoas
23	chr4:3332400-3343800	Weak transcription	Fetal Intestine Small	intestine
24	chr4:3332600-3342600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr4:3332800-3343600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr4:3332800-3343600	Weak transcription	Primary T cells from cord blood	blood
27	chr4:3332800-3343600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr4:3334000-3342200	Weak transcription	Pancreas	Pancrea
29	chr4:3334000-3342400	Weak transcription	Left Ventricle	heart
30	chr4:3334000-3345800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr4:3334000-3370600	Weak transcription	Right Atrium	heart
32	chr4:3334400-3343600	Weak transcription	Adipose Nuclei	Adipose
33	chr4:3334600-3343600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr4:3337000-3344000	Weak transcription	Fetal Kidney	kidney
35	chr4:3337400-3343600	Weak transcription	Ovary	ovary
36	chr4:3337400-3343600	Weak transcription	Right Ventricle	heart
37	chr4:3337600-3343600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr4:3338200-3343600	Weak transcription	Brain Anterior Caudate	brain
39	chr4:3338400-3343600	Weak transcription	HepG2	liver
40	chr4:3338400-3343800	Weak transcription	Pancreatic Islets	Pancreatic Islet
41	chr4:3339200-3353200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr4:3339800-3343600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr4:3339800-3343600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr4:3340200-3343200	Enhancers	Lung	lung
45	chr4:3340200-3344000	Enhancers	Brain Germinal Matrix	brain
46	chr4:3340400-3342600	Weak transcription	A549	lung
47	chr4:3340400-3343600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr4:3340600-3342200	Weak transcription	Spleen	Spleen
49	chr4:3340600-3342400	Weak transcription	Fetal Muscle Trunk	muscle
50	chr4:3340600-3343600	Weak transcription	Placenta	Placenta

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