The 2.0 version of rSNPBase

Variant report

Variant esv3401187
Chromosome Location chr10:89697476-89697724
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89647000-89711200 Weak transcription Stomach Smooth Muscle stomach
2 chr10:89663800-89725400 Weak transcription Colonic Mucosa Colon
3 chr10:89666000-89712400 Weak transcription Fetal Brain Male brain
4 chr10:89673600-89726000 Weak transcription Brain Substantia Nigra brain
5 chr10:89674200-89711000 Weak transcription HepG2 liver
6 chr10:89674800-89724400 Weak transcription Fetal Brain Female brain
7 chr10:89675400-89726000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr10:89675600-89705000 Weak transcription Fetal Stomach stomach
9 chr10:89675600-89705200 Weak transcription Esophagus oesophagus
10 chr10:89682000-89705200 Weak transcription Fetal Intestine Small intestine
11 chr10:89682000-89705200 Weak transcription Left Ventricle heart
12 chr10:89682000-89705600 Weak transcription Lung lung
13 chr10:89682400-89705200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr10:89683200-89705000 Weak transcription Thymus Thymus
15 chr10:89683200-89715200 Weak transcription Pancreas Pancrea
16 chr10:89683200-89720800 Weak transcription H1 Cell Line embryonic stem cell
17 chr10:89683200-89723800 Weak transcription Psoas Muscle Psoas
18 chr10:89684000-89707400 Strong transcription Dnd41 blood
19 chr10:89684000-89725600 Weak transcription Gastric stomach
20 chr10:89684000-89726200 Weak transcription Spleen Spleen
21 chr10:89684800-89702200 Weak transcription Fetal Kidney kidney
22 chr10:89685800-89712400 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr10:89686600-89698800 Weak transcription K562 blood
24 chr10:89686600-89711200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr10:89686800-89708400 Weak transcription Aorta Aorta
26 chr10:89686800-89710400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr10:89687000-89712200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr10:89687200-89705800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr10:89687200-89705800 Weak transcription Small Intestine intestine
30 chr10:89687400-89715200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr10:89687600-89711400 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr10:89687600-89725600 Weak transcription Right Ventricle heart
33 chr10:89690200-89725400 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr10:89691200-89698000 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr10:89691200-89708400 Strong transcription Fetal Thymus thymus
36 chr10:89691400-89706400 Strong transcription Primary B cells from peripheral blood blood
37 chr10:89691600-89698600 Strong transcription Primary monocytes fromperipheralblood blood
38 chr10:89691600-89705000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr10:89691600-89705000 Weak transcription HSMMtube muscle
40 chr10:89691600-89707200 Strong transcription Primary B cells from cord blood blood
41 chr10:89691600-89711400 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr10:89691800-89698000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr10:89692200-89706000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr10:89692200-89712000 Weak transcription Brain Inferior Temporal Lobe brain
45 chr10:89692200-89724800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr10:89692400-89705200 Weak transcription NHEK skin
47 chr10:89692600-89698400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr10:89692600-89704400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr10:89692800-89698000 Strong transcription Primary T helper cells fromperipheralblood blood
50 chr10:89693000-89698400 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015