Variant report

Variant	esv3401601
Chromosome Location	chr19:18551998-18554482
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr19:18552765-18552888	K562	blood:	n/a	n/a
2	BHLHE40	chr19:18552909-18552926	GM12878	blood:	n/a	n/a
3	BRCA1	chr19:18551831-18552004	HepG2	liver:	n/a	n/a
4	CBX3	chr19:18552322-18553236	K562	blood:	n/a	n/a
5	CBX3	chr19:18552735-18553015	K562	blood:	n/a	n/a
6	CHD2	chr19:18552783-18552787	K562	blood:	n/a	n/a
7	CTCF	chr19:18553114-18553115	GM19239	blood:	n/a	n/a
8	CTCF	chr19:18552784-18553111	GM19239	blood:	n/a	n/a
9	CTCF	chr19:18553171-18553402	GM19239	blood:	n/a	n/a
10	CTCF	chr19:18553116-18553170	GM19239	blood:	n/a	n/a
11	E2F6	chr19:18552399-18552532	K562	blood:	n/a	n/a
12	EGR1	chr19:18552448-18553531	K562	blood:	n/a	chr19:18552562-18552572 chr19:18552568-18552581 chr19:18552567-18552582 chr19:18552569-18552578 chr19:18552573-18552583 chr19:18552568-18552581 chr19:18552562-18552575
13	EGR1	chr19:18552725-18552898	GM12878	blood:	n/a	n/a
14	EGR1	chr19:18552396-18553538	K562	blood:	n/a	chr19:18552562-18552572 chr19:18552568-18552581 chr19:18552567-18552582 chr19:18552569-18552578 chr19:18552573-18552583 chr19:18552568-18552581 chr19:18552562-18552575
15	ELF1	chr19:18552378-18552627	K562	blood:	n/a	n/a
16	EP300	chr19:18552562-18552828	K562	blood:	n/a	n/a
17	EP300	chr19:18552608-18552681	K562	blood:	n/a	n/a
18	ESR1	chr19:18551844-18552222	T-47D	breast:	n/a	n/a
19	ESR1	chr19:18551873-18552188	T-47D	breast:	n/a	n/a
20	ESR1	chr19:18551809-18552199	T-47D	breast:	n/a	n/a
21	FOSL2	chr19:18549286-18553091	HepG2	liver:	n/a	n/a
22	FOXA1	chr19:18551840-18552420	HepG2	liver:	n/a	n/a
23	GABPA	chr19:18552420-18553109	K562	blood:	n/a	n/a
24	GATA2	chr19:18552448-18552894	K562	blood:	n/a	chr19:18552656-18552673 chr19:18552655-18552662 chr19:18552654-18552664 chr19:18552655-18552662 chr19:18552655-18552662 chr19:18552653-18552665
25	HCFC1	chr19:18552975-18552999	K562	blood:	n/a	n/a
26	HDAC2	chr19:18552468-18552765	K562	blood:	n/a	chr19:18552654-18552663
27	HDAC2	chr19:18551904-18552396	HepG2	liver:	n/a	n/a
28	HDAC2	chr19:18552446-18552800	K562	blood:	n/a	chr19:18552654-18552663
29	HNF4A	chr19:18551973-18552312	HepG2	liver:	n/a	chr19:18552155-18552168 chr19:18552152-18552170 chr19:18552085-18552098 chr19:18552155-18552167 chr19:18552155-18552167 chr19:18552155-18552168 chr19:18552150-18552172 chr19:18552085-18552098
30	HNF4A	chr19:18551942-18552293	HepG2	liver:	n/a	chr19:18552155-18552168 chr19:18552152-18552170 chr19:18552085-18552098 chr19:18552155-18552167 chr19:18552155-18552167 chr19:18552155-18552168 chr19:18552150-18552172 chr19:18552085-18552098
31	HNF4A	chr19:18551901-18552269	HepG2	liver:	n/a	chr19:18552155-18552168 chr19:18552152-18552170 chr19:18552085-18552098 chr19:18552155-18552167 chr19:18552155-18552167 chr19:18552155-18552168 chr19:18552150-18552172 chr19:18552085-18552098
32	HNF4G	chr19:18551973-18552276	HepG2	liver:	n/a	chr19:18552155-18552168 chr19:18552152-18552170 chr19:18552154-18552169 chr19:18552085-18552098 chr19:18552155-18552167 chr19:18552155-18552167 chr19:18552155-18552168 chr19:18552150-18552172 chr19:18552085-18552098
33	JUND	chr19:18552588-18552816	K562	blood:	n/a	n/a
34	MAFK	chr19:18553447-18553467	K562	blood:	n/a	n/a
35	MAFK	chr19:18553335-18553470	HepG2	liver:	n/a	n/a
36	MAX	chr19:18552330-18553032	K562	blood:	n/a	n/a
37	MAX	chr19:18552566-18552736	K562	blood:	n/a	n/a
38	MAX	chr19:18552620-18552735	K562	blood:	n/a	n/a
39	MAZ	chr19:18552566-18553013	K562	blood:	n/a	n/a
40	MAZ	chr19:18551844-18552187	HepG2	liver:	n/a	chr19:18552131-18552141
41	MTA3	chr19:18552714-18553097	GM12878	blood:	n/a	n/a
42	MYBL2	chr19:18551963-18552424	HepG2	liver:	n/a	n/a
43	MYC	chr19:18553103-18553113	MCF-7	breast:	n/a	n/a
44	MYC	chr19:18552812-18553088	MCF-7	breast:	n/a	n/a
45	MYC	chr19:18552803-18552809	MCF-7	breast:	n/a	n/a
46	MYC	chr19:18552738-18553156	MCF-7	breast:	n/a	n/a
47	MYC	chr19:18553216-18553252	MCF-7	breast:	n/a	n/a
48	MYC	chr19:18553223-18553352	HUVEC	blood vessel:	n/a	n/a
49	MYC	chr19:18552712-18552784	K562	blood:	n/a	n/a
50	NFATC1	chr19:18552691-18552982	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:18553995-18554045	MCF-7	breast:	n/a
2	chr19:18553995-18554045	IMR90	lung:	fetal
3	chr19:18553995-18554045	HL-60	blood:	n/a
4	chr19:18553995-18554045	AoSMC	blood vessel:	n/a
5	chr19:18553995-18554045	MCF10A-Er-Src	breast:	n/a
6	chr19:18553995-18554045	Jurkat	blood:	n/a
7	chr19:18553995-18554045	HPAEpiC	pulmonary alveolar:	n/a
8	chr19:18553995-18554045	HCT-116	colon:	n/a
9	chr19:18553995-18554045	K562	blood:	n/a
10	chr19:18553995-18554045	GM19239	blood:	n/a
11	chr19:18553995-18554045	GM12891	blood:	n/a
12	chr19:18553995-18554045	SK-N-MC	brain:	n/a
13	chr19:18553995-18554045	NHDF-neo	bronchial:	n/a
14	chr19:18553995-18554045	U87	brain:	n/a
15	chr19:18553995-18554045	ovcar-3	ovarian:	n/a
16	chr19:18553995-18554045	Caco-2	colon:	n/a
17	chr19:18553995-18554045	CMK	blood:	n/a
18	chr19:18553995-18554045	HCF	heart:	n/a
19	chr19:18553995-18554045	NHBE	bronchial:	n/a
20	chr19:18553995-18554045	PrEC	prostate:	n/a
21	chr19:18553995-18554045	SAEC	small airway:	n/a
22	chr19:18553995-18554045	RPTEC	kidney:	n/a
23	chr19:18553995-18554045	T-47D	breast:	n/a
24	chr19:18553995-18554045	Hepatocyte	liver:	n/a
25	chr19:18553995-18554045	AG04449	skin:	fetal
26	chr19:18553995-18554045	SK-N-SH	brain:	n/a
27	chr19:18553995-18554045	HEK293	kidney:	embryo
28	chr19:18553995-18554045	BE2_C	brain:	n/a
29	chr19:18553995-18554045	ProgFib	skin:	n/a
30	chr19:18553995-18554045	HCPEpiC	choroid plexus:	n/a
31	chr19:18553995-18554045	NH-A	brain:	n/a
32	chr19:18553995-18554045	HEEpiC	esophagus:	n/a
33	chr19:18553995-18554045	HCM	heart:	n/a
34	chr19:18553995-18554045	PFSK-1	brain:	n/a
35	chr19:18553995-18554045	HepG2	liver:	n/a
36	chr19:18553995-18554045	Hela-S3	cervix:	n/a
37	chr19:18553995-18554045	PANC-1	pancreas:	n/a
38	chr19:18553995-18554045	HUVEC	blood vessel:	n/a
39	chr19:18553995-18554045	HMEC	breast:	n/a
40	chr19:18553995-18554045	AG10803	skin:	n/a
41	chr19:18553995-18554045	H1-hESC	embryonic stem cell:	embryo
42	chr19:18553995-18554045	LNCaP	prostate:	n/a
43	chr19:18553995-18554045	SK-N-SH_RA	brain:	n/a
44	chr19:18553995-18554045	A549	lung:	n/a
45	chr19:18553995-18554045	SKMC	muscle:	n/a
46	chr19:18553995-18554045	HIPEpiC	eye:	n/a
47	chr19:18553995-18554045	HAEpiC	amniotic membrane:	n/a
48	chr19:18553995-18554045	NB4	blood:	n/a
49	chr19:18553995-18554045	GM12878	blood:	n/a
50	chr19:18553995-18554045	BJ	skin:	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:18550508..18552172-chr19:18631567..18633439,2	K562	blood:
2	chr19:18552236..18554463-chr19:18572240..18574871,2	K562	blood:
3	chr19:18550282..18552478-chr19:18560727..18563177,3	K562	blood:
4	chr19:18552619..18554243-chr19:18681800..18683781,2	K562	blood:
5	chr19:18389237..18391890-chr19:18553028..18555362,2	K562	blood:
6	chr19:18548890..18552469-chr19:18555256..18558580,5	MCF-7	breast:
7	chr19:18495925..18498880-chr19:18550697..18553844,3	K562	blood:
8	chr19:18553947..18555891-chr19:18746913..18749059,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SSBP4-2	chr19:18552229-18552354	ENSG00000268199.2
2	lnc-ISYNA1-2	chr19:18553705-18554469	NONHSAT062975
3	lnc-SSBP4-2	chr19:18551920-18552354	NONHSAT062974
4	lnc-SSBP4-2	chr19:18553935-18555242	NONHSAT062974
5	lnc-SSBP4-2	chr19:18553935-18554407	ENSG00000268199.2

Variant related genes	Relation type
ISYNA1	TF binding region
ENSG00000268199	TF binding region
ENSG00000256989	TF binding region
ISYNA1	CpG island
ENSG00000268199	CpG island
ENSG00000256989	CpG island
ENSG00000221983	chromatin interactions
ENSG00000264175	chromatin interactions
ENSG00000130513	chromatin interactions
ENSG00000167487	chromatin interactions
ENSG00000130522	chromatin interactions
ENSG00000105656	chromatin interactions

Extended variants
information (count: 112 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:112 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs576512193	chr19:18552037-18552038	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
2	rs539087006	chr19:18552065-18552066	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
3	rs558829345	chr19:18552066-18552067	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
4	rs145490232	chr19:18552069-18552070	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
5	rs549189016	chr19:18552117-18552118	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
6	rs540714155	chr19:18552131-18552132	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
7	rs12981988	chr19:18552139-18552140	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs28572537	chr19:18552208-18552209	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region lncRNA	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs560340052	chr19:18552240-18552241	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
10	rs543720943	chr19:18552261-18552262	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
11	rs562904859	chr19:18552288-18552289	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
12	rs531985650	chr19:18552314-18552315	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
13	rs545879948	chr19:18552409-18552410	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs559223538	chr19:18552423-18552424	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs528275959	chr19:18552489-18552490	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs548116244	chr19:18552490-18552491	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs568285920	chr19:18552533-18552534	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs529399225	chr19:18552577-18552578	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs373353836	chr19:18552578-18552579	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs113931945	chr19:18552586-18552587	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs181470106	chr19:18552600-18552601	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs146644274	chr19:18552608-18552609	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs570061602	chr19:18552627-18552628	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs62122439	chr19:18552729-18552730	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs186512324	chr19:18552744-18552745	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs201374728	chr19:18552803-18552804	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs111396399	chr19:18552814-18552815	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs373916204	chr19:18552818-18552819	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs200597033	chr19:18552835-18552836	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs199813372	chr19:18552836-18552837	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs367938223	chr19:18552838-18552839	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs200480099	chr19:18552854-18552855	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs202046992	chr19:18552882-18552883	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs200023260	chr19:18552906-18552907	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs201618648	chr19:18552909-18552910	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs199626630	chr19:18552914-18552915	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs371049315	chr19:18552917-18552918	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs200498684	chr19:18552919-18552920	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs200895868	chr19:18552936-18552937	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs73523092	chr19:18552961-18552962	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs201920710	chr19:18552974-18552975	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs199748639	chr19:18552975-18552976	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs372271725	chr19:18552977-18552978	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs114929254	chr19:18552985-18552986	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs114731179	chr19:18552986-18552987	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs199865353	chr19:18552998-18552999	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs201234526	chr19:18552999-18553000	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs201500867	chr19:18553007-18553008	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs201744160	chr19:18553029-18553030	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
50	rs199963858	chr19:18553036-18553037	Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Follicular lymphoma	20505157	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	20179077	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21080181	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Lung cancer	17297452	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Chordoma	18071362	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Urothelial carcinoma	21177765	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Basal cell lymphoma	21115979	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Medullary thyroid carcinoma	18765511	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21364760	CNVD
Mycobacterial infection	18421352	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute monocytic leukemia	16498392	CNVD
Lung cancer	18438408	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Liver carcinoma	19366792	CNVD
Colorectal cancer	19455253	CNVD
Lujan-Fryns syndrom	21521776	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Cancer	17440070	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:315 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:18545200-18570000	Weak transcription	Small Intestine	intestine
2	chr19:18548600-18554200	Weak transcription	Dnd41	blood
3	chr19:18548800-18552800	Weak transcription	Primary T cells from cord blood	blood
4	chr19:18548800-18552800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr19:18548800-18552800	Weak transcription	HSMMtube	muscle
6	chr19:18548800-18553200	Weak transcription	Fetal Kidney	kidney
7	chr19:18548800-18554200	Weak transcription	NHDF-Ad	bronchial
8	chr19:18549000-18552600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr19:18549000-18552600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr19:18549200-18552200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr19:18549200-18554200	Enhancers	Placenta	Placenta
12	chr19:18549200-18554400	Weak transcription	Primary B cells from cord blood	blood
13	chr19:18549200-18559600	Weak transcription	HSMM	muscle
14	chr19:18549200-18566200	Weak transcription	HUVEC	blood vessel
15	chr19:18549400-18552000	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr19:18549400-18552000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
17	chr19:18549400-18552400	Enhancers	A549	lung
18	chr19:18549400-18552600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
19	chr19:18549400-18552800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
20	chr19:18549400-18552800	Weak transcription	GM12878-XiMat	blood
21	chr19:18549400-18553400	Enhancers	Fetal Intestine Large	intestine
22	chr19:18549400-18554000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
23	chr19:18549400-18554600	Weak transcription	Brain Angular Gyrus	brain
24	chr19:18549400-18556400	Weak transcription	Pancreatic Islets	Pancreatic Islet
25	chr19:18549600-18552000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
26	chr19:18549600-18552000	Weak transcription	Lung	lung
27	chr19:18549600-18553000	Weak transcription	Brain Anterior Caudate	brain
28	chr19:18549600-18553000	Weak transcription	Gastric	stomach
29	chr19:18549600-18553400	Enhancers	Fetal Intestine Small	intestine
30	chr19:18549600-18553400	Enhancers	Pancreas	Pancrea
31	chr19:18549600-18554000	Weak transcription	Brain Germinal Matrix	brain
32	chr19:18549600-18554200	Weak transcription	Brain Substantia Nigra	brain
33	chr19:18549600-18554400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr19:18549600-18554400	Weak transcription	Brain Inferior Temporal Lobe	brain
35	chr19:18549800-18552000	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
36	chr19:18549800-18553200	Weak transcription	Colonic Mucosa	Colon
37	chr19:18549800-18553400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr19:18549800-18554000	Weak transcription	Rectal Mucosa Donor 29	rectum
39	chr19:18549800-18554200	Weak transcription	Fetal Brain Female	brain
40	chr19:18549800-18554600	Weak transcription	Rectal Smooth Muscle	rectum
41	chr19:18549800-18567000	Weak transcription	Psoas Muscle	Psoas
42	chr19:18550000-18552000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr19:18550000-18552800	Weak transcription	Primary B cells from peripheral blood	blood
44	chr19:18550000-18552800	Weak transcription	Sigmoid Colon	Sigmoid Colon
45	chr19:18550000-18553800	Weak transcription	Left Ventricle	heart
46	chr19:18550000-18553800	Weak transcription	Right Ventricle	heart
47	chr19:18550000-18553800	Weak transcription	Thymus	Thymus
48	chr19:18550000-18554000	Weak transcription	Colon Smooth Muscle	Colon
49	chr19:18550000-18554200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr19:18550000-18554400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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