Variant report

Variant	esv3404376
Chromosome Location	chr20:23729246-23805771
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr20:23781355-23781508	K562	blood:	n/a	n/a
2	CEBPB	chr20:23779809-23779920	HepG2	liver:	n/a	chr20:23779841-23779854
3	CEBPB	chr20:23747142-23747274	K562	blood:	n/a	chr20:23747171-23747182 chr20:23747169-23747180 chr20:23747171-23747180 chr20:23747171-23747180 chr20:23747169-23747182 chr20:23747171-23747180 chr20:23747171-23747180 chr20:23747169-23747182
4	CEBPB	chr20:23747045-23747345	HepG2	liver:	n/a	chr20:23747171-23747182 chr20:23747169-23747180 chr20:23747171-23747180 chr20:23747171-23747180 chr20:23747169-23747182 chr20:23747171-23747180 chr20:23747171-23747180 chr20:23747169-23747182
5	CEBPB	chr20:23786510-23786667	HepG2	liver:	n/a	chr20:23786550-23786561
6	CEBPB	chr20:23747026-23747352	A549	lung:	n/a	chr20:23747171-23747182 chr20:23747169-23747180 chr20:23747171-23747180 chr20:23747029-23747041 chr20:23747171-23747180 chr20:23747169-23747182 chr20:23747171-23747180 chr20:23747171-23747180 chr20:23747169-23747182
7	CTCF	chr20:23779881-23780172	Medullo	brain:	n/a	chr20:23780029-23780038 chr20:23780026-23780044 chr20:23780028-23780049
8	CTCF	chr20:23729760-23729910	HPF	lung:	n/a	n/a
9	CTCF	chr20:23754854-23755093	MCF-7	breast:	n/a	chr20:23754976-23754989
10	CTCF	chr20:23779960-23780110	AG04450	lung:	n/a	chr20:23780029-23780038 chr20:23780026-23780044 chr20:23780028-23780049
11	CTCF	chr20:23779880-23780030	AG10803	skin:	n/a	n/a
12	CTCF	chr20:23780309-23780608	MCF-7	breast:	n/a	chr20:23780320-23780329
13	CTCF	chr20:23780360-23780510	GM12873	blood:	n/a	n/a
14	CTCF	chr20:23763015-23763537	SK-N-SH	brain:	n/a	chr20:23763450-23763471 chr20:23763448-23763466 chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210 chr20:23763449-23763465
15	CTCF	chr20:23779702-23779766	GM12891	blood:	n/a	n/a
16	CTCF	chr20:23729730-23729881	K562	blood:	n/a	n/a
17	CTCF	chr20:23779800-23779950	GM12864	blood:	n/a	n/a
18	CTCF	chr20:23779880-23780030	MCF-7	breast:	n/a	n/a
19	CTCF	chr20:23764100-23764217	GM19239	blood:	n/a	n/a
20	CTCF	chr20:23763045-23763506	Gliobla	brain:	n/a	chr20:23763450-23763471 chr20:23763448-23763466 chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210 chr20:23763449-23763465
21	CTCF	chr20:23763100-23763250	NB4	blood:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
22	CTCF	chr20:23779960-23780110	AG09309	skin:	n/a	chr20:23780029-23780038 chr20:23780026-23780044 chr20:23780028-23780049
23	CTCF	chr20:23780215-23780398	K562	blood:	n/a	chr20:23780275-23780296 chr20:23780274-23780290 chr20:23780320-23780329 chr20:23780273-23780291
24	CTCF	chr20:23763022-23763742	MCF-7	breast:	n/a	chr20:23763450-23763471 chr20:23763448-23763466 chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210 chr20:23763449-23763465
25	CTCF	chr20:23763080-23763230	HRPEpiC	eye:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
26	CTCF	chr20:23779875-23780457	MCF-7	breast:	n/a	chr20:23780275-23780296 chr20:23780274-23780290 chr20:23780320-23780329 chr20:23780273-23780291 chr20:23780029-23780038 chr20:23780026-23780044 chr20:23780028-23780049
27	CTCF	chr20:23763120-23763270	HPAF	blood vessel:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
28	CTCF	chr20:23780260-23780410	GM12867	blood:	n/a	chr20:23780275-23780296 chr20:23780274-23780290 chr20:23780320-23780329 chr20:23780273-23780291
29	CTCF	chr20:23780192-23780403	T-47D	breast:	n/a	chr20:23780275-23780296 chr20:23780274-23780290 chr20:23780320-23780329 chr20:23780273-23780291
30	CTCF	chr20:23729780-23729930	HMF	breast:	n/a	n/a
31	CTCF	chr20:23763140-23763290	GM12864	blood:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
32	CTCF	chr20:23754857-23755063	MCF-7	breast:	n/a	chr20:23754976-23754989
33	CTCF	chr20:23779920-23780070	GM12866	blood:	n/a	chr20:23780029-23780038 chr20:23780026-23780044 chr20:23780028-23780049
34	CTCF	chr20:23762780-23762930	HL-60	blood:	n/a	n/a
35	CTCF	chr20:23779693-23779771	GM19240	blood:	n/a	n/a
36	CTCF	chr20:23779895-23780441	MCF-7	breast:	n/a	chr20:23780275-23780296 chr20:23780274-23780290 chr20:23780320-23780329 chr20:23780273-23780291 chr20:23780029-23780038 chr20:23780026-23780044 chr20:23780028-23780049
37	CTCF	chr20:23780260-23780410	MCF-7	breast:	n/a	chr20:23780275-23780296 chr20:23780274-23780290 chr20:23780320-23780329 chr20:23780273-23780291
38	CTCF	chr20:23763120-23763270	HL-60	blood:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
39	CTCF	chr20:23763160-23763310	NHEK	skin:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
40	CTCF	chr20:23779920-23780070	NHDF-neo	bronchial:	n/a	chr20:23780029-23780038 chr20:23780026-23780044 chr20:23780028-23780049
41	CTCF	chr20:23797610-23797634	GM13977	blood:	n/a	n/a
42	CTCF	chr20:23756440-23756590	GM12867	blood:	n/a	n/a
43	CTCF	chr20:23763074-23763516	H1-hESC	embryonic stem cell:	n/a	chr20:23763450-23763471 chr20:23763448-23763466 chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210 chr20:23763449-23763465
44	CTCF	chr20:23764153-23764274	MCF-7	breast:	n/a	n/a
45	CTCF	chr20:23763140-23763290	HRE	kidney:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
46	CTCF	chr20:23729517-23729596	H1-hESC	embryonic stem cell:	n/a	n/a
47	CTCF	chr20:23763056-23763310	GM10266	blood:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
48	CTCF	chr20:23754860-23755010	MCF-7	breast:	n/a	chr20:23754976-23754989
49	CTCF	chr20:23763160-23763310	HRE	kidney:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210
50	CTCF	chr20:23763089-23763335	GM19240	blood:	n/a	chr20:23763195-23763204 chr20:23763194-23763215 chr20:23763192-23763210

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr20:23732595-23732645	PANC-1	pancreas:	n/a
2	chr20:23732873-23732923	PrEC	prostate:	n/a
3	chr20:23732873-23732923	HUVEC	blood vessel:	n/a
4	chr20:23731367-23731417	SK-N-SH_RA	brain:	n/a
5	chr20:23732873-23732923	GM12892	blood:	n/a
6	chr20:23732595-23732645	Jurkat	blood:	n/a
7	chr20:23731367-23731417	Hepatocyte	liver:	n/a
8	chr20:23732873-23732923	AG09309	skin:	n/a
9	chr20:23732873-23732923	HEEpiC	esophagus:	n/a
10	chr20:23731367-23731417	NH-A	brain:	n/a
11	chr20:23732873-23732923	MCF-7	breast:	n/a
12	chr20:23732595-23732645	U87	brain:	n/a
13	chr20:23732595-23732645	SK-N-SH_RA	brain:	n/a
14	chr20:23731367-23731417	BJ	skin:	n/a
15	chr20:23732595-23732645	CMK	blood:	n/a
16	chr20:23732873-23732923	NT2-D1	testis:	n/a
17	chr20:23731367-23731417	ECC-1	luminal epithelium:	n/a
18	chr20:23732873-23732923	ProgFib	skin:	n/a
19	chr20:23732873-23732923	HCT-116	colon:	n/a
20	chr20:23731367-23731417	GM12878	blood:	n/a
21	chr20:23732595-23732645	ProgFib	skin:	n/a
22	chr20:23731367-23731417	HNPCEpiC	eye:	n/a
23	chr20:23732873-23732923	ovcar-3	ovarian:	n/a
24	chr20:23732873-23732923	PANC-1	pancreas:	n/a
25	chr20:23731367-23731417	HCM	heart:	n/a
26	chr20:23732595-23732645	RPTEC	kidney:	n/a
27	chr20:23732873-23732923	NB4	blood:	n/a
28	chr20:23732595-23732645	HMEC	breast:	n/a
29	chr20:23731367-23731417	GM19239	blood:	n/a
30	chr20:23731367-23731417	NHBE	bronchial:	n/a
31	chr20:23732595-23732645	AG04449	skin:	fetal
32	chr20:23732873-23732923	Caco-2	colon:	n/a
33	chr20:23731367-23731417	SK-N-SH	brain:	n/a
34	chr20:23732873-23732923	HepG2	liver:	n/a
35	chr20:23731367-23731417	AG04450	lung:	fetal
36	chr20:23732873-23732923	HL-60	blood:	n/a
37	chr20:23732873-23732923	AG04450	lung:	fetal
38	chr20:23731367-23731417	HCF	heart:	n/a
39	chr20:23732595-23732645	HCM	heart:	n/a
40	chr20:23731367-23731417	RPTEC	kidney:	n/a
41	chr20:23731367-23731417	HEK293	kidney:	embryo
42	chr20:23732873-23732923	HEK293	kidney:	embryo
43	chr20:23732595-23732645	Hepatocyte	liver:	n/a
44	chr20:23732873-23732923	HPAEpiC	pulmonary alveolar:	n/a
45	chr20:23732873-23732923	CMK	blood:	n/a
46	chr20:23732595-23732645	HL-60	blood:	n/a
47	chr20:23731367-23731417	SKMC	muscle:	n/a
48	chr20:23732595-23732645	SKMC	muscle:	n/a
49	chr20:23731367-23731417	T-47D	breast:	n/a
50	chr20:23732873-23732923	HCM	heart:	n/a

No.	Distal block	Cell Line	Cell type
1	chr20:23649188..23649689-chr20:23762769..23763504,2	MCF-7	breast:
2	chr20:23702805..23703439-chr20:23754485..23755364,2	MCF-7	breast:
3	chr20:23645187..23645712-chr20:23775888..23776677,2	MCF-7	breast:
4	chr20:23779854..23780390-chr20:23870001..23870554,2	MCF-7	breast:
5	chr20:23779275..23780409-chr20:23837370..23837992,3	MCF-7	breast:
6	chr20:23704491..23705478-chr20:23779622..23780975,4	MCF-7	breast:
7	chr20:23648767..23649721-chr20:23779902..23780425,2	MCF-7	breast:
8	chr20:23763057..23763763-chr20:23870036..23871243,3	MCF-7	breast:
9	chr20:23704352..23705295-chr20:23754423..23755304,4	MCF-7	breast:
10	chr20:23754506..23755505-chr20:23837367..23838288,3	MCF-7	breast:
11	chr20:23704490..23705249-chr20:23762654..23763235,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CST8-3	chr20:23778778-23778924	XLOC_013494
2	lnc-CST8-3	chr20:23785871-23786300	XLOC_013494
3	lnc-CST8-5	chr20:23733160-23733281	NONHSAT079083
4	lnc-CST8-5	chr20:23733871-23734300	NONHSAT079083
5	lnc-CST8-3	chr20:23785160-23785281	XLOC_013494
6	lnc-CST8-5	chr20:23732376-23732473	NONHSAT079083
7	lnc-CST8-3	chr20:23784376-23784473	XLOC_013494

Variant related genes	Relation type
ENSG00000230908	TF binding region
CST1	TF binding region
ENSG00000230908	CpG island
CST1	CpG island
WWC2	miRNA target sites
WWP2	miRNA target sites
XIAP	miRNA target sites

Extended variants
information (count: 2672 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:2672 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs139240857	chr20:23729265-23729266	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs111801460	chr20:23729273-23729274	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs186093495	chr20:23729281-23729282	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs113478826	chr20:23729282-23729283	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs566604739	chr20:23729286-23729287	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs559245433	chr20:23729302-23729303	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs575930606	chr20:23729309-23729310	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs544443313	chr20:23729318-23729319	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs561513247	chr20:23729319-23729320	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs574884246	chr20:23729321-23729322	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs540715655	chr20:23729327-23729328	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs190417182	chr20:23729378-23729379	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs533911737	chr20:23729383-23729384	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs532326131	chr20:23729387-23729388	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs146007173	chr20:23729389-23729390	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs148656170	chr20:23729396-23729397	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs117743070	chr20:23729410-23729411	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs550528965	chr20:23729415-23729416	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs567450542	chr20:23729416-23729417	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs536004069	chr20:23729421-23729422	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs142226596	chr20:23729426-23729427	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs566476430	chr20:23729458-23729459	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs371259412	chr20:23729484-23729485	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs71267465	chr20:23729486-23729487	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs183195751	chr20:23729492-23729493	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs187680281	chr20:23729493-23729494	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs112075891	chr20:23729495-23729496	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs4465840	chr20:23729496-23729497	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs4422222	chr20:23729500-23729501	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs540376777	chr20:23729506-23729507	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs560184964	chr20:23729513-23729514	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs4544516	chr20:23729514-23729515	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs545828274	chr20:23729521-23729522	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs71267466	chr20:23729534-23729535	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs4268993	chr20:23729536-23729537	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs550842222	chr20:23729542-23729543	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs141614535	chr20:23729554-23729555	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs373176009	chr20:23729555-23729556	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs34398709	chr20:23729556-23729557	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs34861134	chr20:23729565-23729566	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs11471975	chr20:23729566-23729567	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs537648836	chr20:23729568-23729569	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs529847679	chr20:23729577-23729578	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs546397264	chr20:23729579-23729580	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs566536535	chr20:23729586-23729587	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs372192719	chr20:23729602-23729603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs376987841	chr20:23729620-23729621	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs368289519	chr20:23729627-23729628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs112974717	chr20:23729630-23729631	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs7354713	chr20:23729637-23729638	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	16272173	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	19627613	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Central neurocytomas	17123091	CNVD
Colorectal cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Colorectal cancer	21645411	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Renal cell carcinoma	18765545	CNVD
Alagille syndrome	17576883	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Breast cancer	16608533	CNVD
Bladder cancer	21909424	CNVD
Esophageal cancer	21851588	CNVD
Breast cancer	17133270	CNVD
Thrombophilia	17576883	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	21062444	CNVD
Hepatocellular carcinoma	22174799	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Chordoma	18071362	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
small cell lung cancer	17426248	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:217 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:23726800-23731800	Weak transcription	HUVEC	blood vessel
2	chr20:23727000-23729600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr20:23728800-23731400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr20:23728800-23735000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr20:23729200-23730600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr20:23729600-23734400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr20:23730600-23730800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr20:23730600-23731000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
9	chr20:23730800-23731000	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr20:23730800-23731600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr20:23731000-23731200	Enhancers	H9 Cell Line	embryonic stem cell
12	chr20:23731000-23732000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr20:23731200-23731400	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
14	chr20:23731400-23731600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr20:23731600-23733600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr20:23731800-23732000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr20:23731800-23732200	Enhancers	HUVEC	blood vessel
18	chr20:23732000-23732800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr20:23732200-23734200	Weak transcription	HUVEC	blood vessel
20	chr20:23732600-23734000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr20:23732800-23733200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr20:23733200-23733600	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr20:23733600-23737000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr20:23733800-23736600	Enhancers	NHDF-Ad	bronchial
25	chr20:23733800-23736800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr20:23734000-23736400	Enhancers	Muscle Satellite Cultured Cells	--
27	chr20:23734000-23736400	Enhancers	Osteobl	bone
28	chr20:23734000-23736800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr20:23734200-23734400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr20:23734200-23736600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr20:23734200-23737000	Enhancers	HUVEC	blood vessel
32	chr20:23734200-23737600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr20:23734400-23734600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr20:23734400-23735400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr20:23734400-23736400	Enhancers	HSMMtube	muscle
36	chr20:23734400-23736600	Enhancers	NHLF	lung
37	chr20:23734600-23735000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr20:23734600-23736200	Enhancers	HSMM	muscle
39	chr20:23735000-23737000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr20:23735000-23737200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr20:23735200-23736200	Enhancers	Left Ventricle	heart
42	chr20:23735200-23736600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr20:23735400-23735600	Bivalent Enhancer	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr20:23735400-23735800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr20:23735400-23736400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr20:23735400-23736400	Enhancers	Adipose Nuclei	Adipose
47	chr20:23735400-23736600	Enhancers	NH-A	brain
48	chr20:23735400-23737600	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
49	chr20:23735600-23735800	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
50	chr20:23735600-23736400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links