Variant report

Variant	esv3406168
Chromosome Location	chr4:3075379-3078127
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:908)
CpG islands
(count:795)
Chromatin interactive
region (count:18)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:908 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:3076229-3076487	K562	blood:	n/a	n/a
2	ARID3A	chr4:3077170-3077212	K562	blood:	n/a	n/a
3	ARID3A	chr4:3076111-3076475	HepG2	liver:	n/a	n/a
4	ATF2	chr4:3076817-3077785	GM12878	blood:	n/a	n/a
5	ATF2	chr4:3076902-3078066	GM12878	blood:	n/a	n/a
6	ATF2	chr4:3076989-3077471	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr4:3076827-3077509	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF3	chr4:3076216-3076521	K562	blood:	n/a	n/a
9	BACH1	chr4:3075553-3075747	H1-hESC	embryonic stem cell:	n/a	n/a
10	BCLAF1	chr4:3076808-3077331	GM12878	blood:	n/a	chr4:3077266-3077279
11	BCLAF1	chr4:3076783-3077366	GM12878	blood:	n/a	chr4:3077266-3077279
12	BCLAF1	chr4:3077356-3078153	GM12878	blood:	n/a	chr4:3077368-3077381 chr4:3077949-3077958 chr4:3077376-3077389
13	BCLAF1	chr4:3076054-3076689	GM12878	blood:	n/a	chr4:3076489-3076502
14	BCLAF1	chr4:3077412-3078618	GM12878	blood:	n/a	chr4:3077949-3077958
15	BHLHE40	chr4:3076073-3076452	K562	blood:	n/a	n/a
16	BHLHE40	chr4:3077027-3077031	K562	blood:	n/a	n/a
17	BHLHE40	chr4:3076077-3076488	GM12878	blood:	n/a	n/a
18	BHLHE40	chr4:3077051-3077305	GM12878	blood:	n/a	n/a
19	BHLHE40	chr4:3075445-3075734	HepG2	liver:	n/a	chr4:3075553-3075569
20	BRCA1	chr4:3076971-3077283	Hela-S3	cervix:	n/a	chr4:3077035-3077044
21	BRCA1	chr4:3077033-3077221	GM12878	blood:	n/a	chr4:3077035-3077044
22	BRCA1	chr4:3076919-3077192	HepG2	liver:	n/a	chr4:3077035-3077044
23	BRCA1	chr4:3076899-3077271	H1-hESC	embryonic stem cell:	n/a	chr4:3077035-3077044
24	BRCA1	chr4:3075529-3075611	HepG2	liver:	n/a	n/a
25	BRCA1	chr4:3076111-3076456	Hela-S3	cervix:	n/a	n/a
26	CBX3	chr4:3075980-3076356	K562	blood:	n/a	n/a
27	CCNT2	chr4:3075541-3075760	K562	blood:	n/a	n/a
28	CCNT2	chr4:3076883-3077031	K562	blood:	n/a	chr4:3076912-3076921
29	CCNT2	chr4:3076021-3076570	K562	blood:	n/a	n/a
30	CEBPB	chr4:3076324-3076352	K562	blood:	n/a	n/a
31	CEBPD	chr4:3075411-3075813	HepG2	liver:	n/a	n/a
32	CEBPD	chr4:3076306-3076634	K562	blood:	n/a	n/a
33	CEBPD	chr4:3076179-3076595	HepG2	liver:	n/a	n/a
34	CHD1	chr4:3076963-3078549	GM12878	blood:	n/a	chr4:3077381-3077391 chr4:3076978-3076988 chr4:3077035-3077044
35	CHD1	chr4:3076483-3076628	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD1	chr4:3076093-3076615	GM12878	blood:	n/a	n/a
37	CHD2	chr4:3075465-3075643	K562	blood:	n/a	n/a
38	CHD2	chr4:3076106-3076573	HepG2	liver:	n/a	n/a
39	CHD2	chr4:3076057-3076609	GM12878	blood:	n/a	n/a
40	CHD2	chr4:3076043-3076492	K562	blood:	n/a	n/a
41	CHD2	chr4:3075532-3075705	GM12878	blood:	n/a	n/a
42	CHD2	chr4:3076879-3077358	Hela-S3	cervix:	n/a	chr4:3076978-3076988 chr4:3077035-3077044
43	CHD2	chr4:3076851-3077329	K562	blood:	n/a	chr4:3076978-3076988 chr4:3077035-3077044
44	CHD2	chr4:3076090-3076499	H1-hESC	embryonic stem cell:	n/a	n/a
45	CHD2	chr4:3075566-3075739	HepG2	liver:	n/a	n/a
46	CHD2	chr4:3075519-3076592	Hela-S3	cervix:	n/a	n/a
47	CHD2	chr4:3076812-3077389	HepG2	liver:	n/a	chr4:3076978-3076988 chr4:3077035-3077044
48	CHD2	chr4:3075615-3075711	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD2	chr4:3076842-3077600	GM12878	blood:	n/a	chr4:3077381-3077391 chr4:3076978-3076988 chr4:3077035-3077044
50	CHD2	chr4:3076836-3077361	H1-hESC	embryonic stem cell:	n/a	chr4:3076978-3076988 chr4:3077035-3077044

(count:795 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:3076345-3076395	HCF	heart:	n/a
2	chr4:3076557-3076607	HUVEC	blood vessel:	n/a
3	chr4:3076345-3076395	HCF	heart:	n/a
4	chr4:3076557-3076607	HUVEC	blood vessel:	n/a
5	chr4:3075893-3075943	HUVEC	blood vessel:	n/a
6	chr4:3077939-3077989	HCM	heart:	n/a
7	chr4:3075484-3075534	RPTEC	kidney:	n/a
8	chr4:3076557-3076607	ProgFib	skin:	n/a
9	chr4:3076557-3076607	HCF	heart:	n/a
10	chr4:3076418-3076468	AG04449	skin:	fetal
11	chr4:3076557-3076607	AG10803	skin:	n/a
12	chr4:3076305-3076355	SAEC	small airway:	n/a
13	chr4:3076259-3076309	Caco-2	colon:	n/a
14	chr4:3076557-3076607	Hela-S3	cervix:	n/a
15	chr4:3076907-3076957	Hela-S3	cervix:	n/a
16	chr4:3075888-3075938	IMR90	lung:	fetal
17	chr4:3076345-3076395	HRCEpiC	kidney:	n/a
18	chr4:3076334-3076384	T-47D	breast:	n/a
19	chr4:3076334-3076384	BJ	skin:	n/a
20	chr4:3076418-3076468	HCT-116	colon:	n/a
21	chr4:3076259-3076309	HAEpiC	amniotic membrane:	n/a
22	chr4:3077939-3077989	PANC-1	pancreas:	n/a
23	chr4:3076418-3076468	A549	lung:	n/a
24	chr4:3076334-3076384	SKMC	muscle:	n/a
25	chr4:3077939-3077989	HCPEpiC	choroid plexus:	n/a
26	chr4:3076557-3076607	MCF10A-Er-Src	breast:	n/a
27	chr4:3075888-3075938	CMK	blood:	n/a
28	chr4:3076907-3076957	HCF	heart:	n/a
29	chr4:3075893-3075943	SKMC	muscle:	n/a
30	chr4:3076907-3076957	NHBE	bronchial:	n/a
31	chr4:3076271-3076321	SK-N-SH_RA	brain:	n/a
32	chr4:3076418-3076468	GM19239	blood:	n/a
33	chr4:3076271-3076321	IMR90	lung:	fetal
34	chr4:3076305-3076355	U87	brain:	n/a
35	chr4:3075484-3075534	T-47D	breast:	n/a
36	chr4:3076334-3076384	ECC-1	luminal epithelium:	n/a
37	chr4:3076271-3076321	NHDF-neo	bronchial:	n/a
38	chr4:3075484-3075534	HAEpiC	amniotic membrane:	n/a
39	chr4:3075655-3075705	HAEpiC	amniotic membrane:	n/a
40	chr4:3077939-3077989	Hela-S3	cervix:	n/a
41	chr4:3076334-3076384	HIPEpiC	eye:	n/a
42	chr4:3075655-3075705	HMEC	breast:	n/a
43	chr4:3076271-3076321	HCF	heart:	n/a
44	chr4:3076305-3076355	HEK293	kidney:	embryo
45	chr4:3076557-3076607	Caco-2	colon:	n/a
46	chr4:3077939-3077989	NB4	blood:	n/a
47	chr4:3076907-3076957	ProgFib	skin:	n/a
48	chr4:3076557-3076607	HNPCEpiC	eye:	n/a
49	chr4:3075888-3075938	MCF10A-Er-Src	breast:	n/a
50	chr4:3076259-3076309	NH-A	brain:	n/a

(count:18 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:3075638..3077191-chr4:3246487..3249347,2	MCF-7	breast:
2	chr4:3068906..3071079-chr4:3073190..3075687,2	MCF-7	breast:
3	chr4:3075973..3077923-chr4:3128614..3130547,2	MCF-7	breast:
4	chr4:3076969..3077469-chr6:36853503..36854013,2	K562	blood:
5	chr4:3074885..3077461-chr4:3292207..3294882,2	MCF-7	breast:
6	chr4:3076560..3079556-chr4:3107118..3109310,3	MCF-7	breast:
7	chr4:3076425..3077993-chr4:3087345..3089440,2	MCF-7	breast:
8	chr4:3074016..3078502-chr4:3111809..3117809,7	MCF-7	breast:
9	chr17:16556241..16557924-chr4:3075466..3077603,2	MCF-7	breast:
10	chr4:3070733..3073155-chr4:3073597..3075559,3	K562	blood:
11	chr4:3076522..3079094-chr4:3136211..3138250,2	MCF-7	breast:
12	chr4:2964356..2966158-chr4:3074837..3077632,2	K562	blood:
13	chr4:3076858..3078560-chr4:3090552..3093969,4	MCF-7	breast:
14	chr4:2935808..2937729-chr4:3076912..3078834,2	K562	blood:
15	chr4:2935808..2938115-chr4:3076304..3078834,3	K562	blood:
16	chr4:2262471..2264332-chr4:3074788..3077577,2	MCF-7	breast:
17	chr4:2468745..2470693-chr4:3075535..3077781,3	K562	blood:
18	chr4:3076735..3079040-chr4:3100560..3102807,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NOP14-2	chr4:3076153-3076241	NONHSAT094847
2	lnc-NOP14-2	chr4:3076153-3076241	XLOC_003858

No data

Variant related genes	Relation type
HTT-AS	TF binding region
HTT	TF binding region
HTT-AS	CpG island
HTT	CpG island
ENSG00000198663	chromatin interactions
ENSG00000159788	chromatin interactions
ENSG00000125388	chromatin interactions
ENSG00000264765	chromatin interactions
ENSG00000109736	chromatin interactions
ENSG00000197386	chromatin interactions
ENSG00000188981	chromatin interactions
ENSG00000087269	chromatin interactions
ENSG00000123933	chromatin interactions
ENSG00000197566	chromatin interactions
ENSG00000063978	chromatin interactions
ENSG00000249673	chromatin interactions

Extended variants
information (count: 111 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:111 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs143861513	chr4:3075394-3075395	Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs541873881	chr4:3075498-3075499	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
3	rs368830030	chr4:3075503-3075504	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
4	rs527277424	chr4:3075507-3075508	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
5	rs115117610	chr4:3075541-3075542	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
6	rs564384178	chr4:3075563-3075564	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
7	rs533218574	chr4:3075583-3075584	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
8	rs28431418	chr4:3075588-3075589	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs398982	chr4:3075662-3075663	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
10	rs2857935	chr4:3075691-3075692	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs549435903	chr4:3075708-3075709	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
12	rs433069	chr4:3075731-3075732	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
13	rs28616835	chr4:3075736-3075737	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs398691	chr4:3075753-3075754	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
15	rs28441493	chr4:3075783-3075784	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
16	rs373236283	chr4:3075784-3075785	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
17	rs376165809	chr4:3075794-3075795	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
18	rs386868	chr4:3075858-3075859	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
19	rs2798300	chr4:3075861-3075862	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
20	rs35657303	chr4:3075890-3075891	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
21	rs398128	chr4:3075891-3075892	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
22	rs11933387	chr4:3075928-3075929	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
23	rs34514515	chr4:3075981-3075982	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
24	rs149624523	chr4:3076028-3076029	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
25	rs574508305	chr4:3076035-3076036	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
26	rs192641280	chr4:3076076-3076077	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
27	rs577920273	chr4:3076100-3076101	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
28	rs537317066	chr4:3076110-3076111	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
29	rs562233585	chr4:3076117-3076118	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
30	rs116191541	chr4:3076121-3076122	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
31	rs616617	chr4:3076142-3076143	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
32	rs112396951	chr4:3076150-3076151	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
33	rs184840072	chr4:3076164-3076165	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
34	rs572007452	chr4:3076176-3076177	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
35	rs13122415	chr4:3076181-3076182	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region lncRNA	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs189174671	chr4:3076182-3076183	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
37	rs113331544	chr4:3076257-3076258	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
38	rs13132932	chr4:3076266-3076267	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
39	rs550085802	chr4:3076302-3076303	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
40	rs368519841	chr4:3076306-3076307	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
41	rs563367097	chr4:3076336-3076337	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
42	rs396875	chr4:3076339-3076340	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
43	rs558630166	chr4:3076340-3076341	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
44	rs529080862	chr4:3076384-3076385	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
45	rs13102260	chr4:3076405-3076406	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs146151652	chr4:3076450-3076451	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
47	rs574494284	chr4:3076457-3076458	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
48	rs201071630	chr4:3076469-3076470	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
49	rs374076986	chr4:3076604-3076605	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
50	rs9993357	chr4:3076657-3076658	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Myelofibrosis	22110671	CNVD
Wolf-Hirschhorn syndrome	21549014	CNVD
Breast cancer	21806811	CNVD
Wolf-Hirschhorn syndrome	22283845	CNVD
Wolf-Hirschhorn syndrome	16773131	CNVD
Mental retardation	16773131	CNVD
Wolf-Hirschhorn syndrome	22470819	CNVD
Wolf-Hirschhorn syndrome	18541967	CNVD
sporadic birth defects	19047251	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Retinitis pigmentosa	18421352	CNVD
Wolf-Hirschhorn syndrome	19259404	CNVD
Bladder cancer	19242612	CNVD
Breast cancer	19242612	CNVD
Congenital anomalies of the kidney and urinary tract	19242612	CNVD
abnormal development	18461090	CNVD
Olfactory neuroblastoma	18408657	CNVD
Wilms tumour	21544195	CNVD
Melanoma	20688739	CNVD
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Developmental delay	21147756	CNVD
Urothelial carcinoma	21177765	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:453 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:3073600-3075400	Weak transcription	HSMMtube	muscle
2	chr4:3074800-3075400	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:3074800-3075400	Enhancers	Fetal Heart	heart
4	chr4:3074800-3075400	Enhancers	Lung	lung
5	chr4:3074800-3075600	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr4:3074800-3075600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
7	chr4:3074800-3075600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr4:3074800-3075600	Enhancers	Spleen	Spleen
9	chr4:3074800-3075600	Flanking Active TSS	HepG2	liver
10	chr4:3074800-3075800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr4:3074800-3076400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr4:3074800-3077600	Active TSS	Fetal Brain Female	brain
13	chr4:3074800-3078600	Active TSS	HUES6 Cell Line	embryonic stem cell
14	chr4:3075000-3075400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr4:3075000-3075400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
16	chr4:3075000-3075400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr4:3075000-3075400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr4:3075000-3075400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr4:3075000-3075400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr4:3075000-3075400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
21	chr4:3075000-3075400	Enhancers	Fetal Lung	lung
22	chr4:3075000-3075400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
23	chr4:3075000-3075600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
24	chr4:3075000-3075600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
25	chr4:3075000-3075600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr4:3075000-3075600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr4:3075000-3075600	Flanking Active TSS	Brain Anterior Caudate	brain
28	chr4:3075000-3075600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
29	chr4:3075000-3075600	Enhancers	Fetal Brain Male	brain
30	chr4:3075000-3075600	Flanking Active TSS	Fetal Muscle Trunk	muscle
31	chr4:3075000-3075600	Flanking Active TSS	Placenta Amnion	Placenta Amnion
32	chr4:3075000-3075600	Flanking Active TSS	Stomach Smooth Muscle	stomach
33	chr4:3075000-3075600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
34	chr4:3075000-3075800	Flanking Active TSS	Primary hematopoietic stem cells	blood
35	chr4:3075000-3075800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr4:3075000-3075800	Flanking Active TSS	Dnd41	blood
37	chr4:3075000-3076400	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
38	chr4:3075000-3076600	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr4:3075000-3077000	Active TSS	Osteobl	bone
40	chr4:3075000-3077400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
41	chr4:3075000-3077400	Active TSS	HSMM	muscle
42	chr4:3075000-3077600	Active TSS	HUES48 Cell Line	embryonic stem cell
43	chr4:3075000-3077600	Active TSS	HUES64 Cell Line	embryonic stem cell
44	chr4:3075000-3077600	Active TSS	iPS-15b Cell Line	embryonic stem cell
45	chr4:3075000-3077600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr4:3075000-3077600	Active TSS	Brain Germinal Matrix	brain
47	chr4:3075000-3077800	Active TSS	H9 Cell Line	embryonic stem cell
48	chr4:3075000-3078400	Active TSS	A549	lung
49	chr4:3075200-3075400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
50	chr4:3075200-3075400	Flanking Active TSS	H1 Cell Line	embryonic stem cell

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