Variant report

Variant esv3408069
Chromosome Location chr15:59902285-59904833
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:59896800-59911800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr15:59897400-59903400 Weak transcription HepG2 liver
3 chr15:59902000-59902400 Enhancers Duodenum Mucosa Duodenum
4 chr15:59902000-59902400 ZNF genes & repeats A549 lung
5 chr15:59902200-59903400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr15:59902200-59903600 Weak transcription Pancreas Pancrea
7 chr15:59902200-59903600 Weak transcription Stomach Mucosa stomach
8 chr15:59902200-59905000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr15:59902400-59903400 Weak transcription A549 lung
10 chr15:59902400-59903600 Weak transcription Duodenum Mucosa Duodenum
11 chr15:59902800-59904200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr15:59903000-59903200 Active TSS HSMM muscle
13 chr15:59903200-59903600 Flanking Active TSS HSMM muscle
14 chr15:59903400-59903600 Enhancers Fetal Intestine Small intestine
15 chr15:59903400-59903600 Active TSS Rectal Mucosa Donor 31 rectum
16 chr15:59903400-59903600 Enhancers Hela-S3 cervix
17 chr15:59903400-59903600 Enhancers HepG2 liver
18 chr15:59903400-59903800 Flanking Active TSS A549 lung
19 chr15:59903400-59905600 Enhancers Fetal Intestine Large intestine
20 chr15:59903600-59903800 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr15:59903600-59903800 Enhancers Colonic Mucosa Colon
22 chr15:59903600-59903800 Flanking Active TSS Fetal Intestine Small intestine
23 chr15:59903600-59903800 Flanking Active TSS NHDF-Ad bronchial
24 chr15:59903600-59904000 Enhancers Liver Liver
25 chr15:59903600-59904000 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr15:59903600-59904200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr15:59903600-59904200 Active TSS Rectal Mucosa Donor 29 rectum
28 chr15:59903600-59904400 Bivalent Enhancer Muscle Satellite Cultured Cells --
29 chr15:59903600-59904400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr15:59903600-59904400 Enhancers Pancreas Pancrea
31 chr15:59903600-59904400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
32 chr15:59903600-59904400 Flanking Active TSS Hela-S3 cervix
33 chr15:59903600-59905000 Active TSS Rectal Smooth Muscle rectum
34 chr15:59903600-59905200 Enhancers Pancreatic Islets Pancreatic Islet
35 chr15:59903600-59905200 Flanking Active TSS HepG2 liver
36 chr15:59903600-59905400 Active TSS Stomach Mucosa stomach
37 chr15:59903600-59907200 Active TSS Duodenum Mucosa Duodenum
38 chr15:59903800-59904000 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
39 chr15:59903800-59904000 Weak transcription Fetal Intestine Small intestine
40 chr15:59903800-59904200 Weak transcription Colonic Mucosa Colon
41 chr15:59903800-59904200 Enhancers NHDF-Ad bronchial
42 chr15:59903800-59905000 Active TSS A549 lung
43 chr15:59904000-59904400 Enhancers Osteobl bone
44 chr15:59904000-59905000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
45 chr15:59904000-59906000 ZNF genes & repeats Fetal Intestine Small intestine
46 chr15:59904200-59904400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr15:59904200-59904600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
48 chr15:59904200-59904800 Active TSS Gastric stomach
49 chr15:59904200-59905200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr15:59904200-59905200 Active TSS Fetal Stomach stomach

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