Variant report

Variant	esv3408268
Chromosome Location	chr1:246944429-246948627
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:103)
CpG islands
(count:61)
Chromatin interactive
region (count:11)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:103 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CBX3	chr1:246945245-246946092	K562	blood:	n/a	n/a
2	CEBPB	chr1:246945459-246945696	HepG2	liver:	n/a	n/a
3	CEBPB	chr1:246945440-246945711	IMR90	lung:	n/a	n/a
4	CHD2	chr1:246948608-246948795	HepG2	liver:	n/a	n/a
5	CTCF	chr1:246945920-246946070	AG04450	lung:	n/a	n/a
6	CTCF	chr1:246945920-246946070	GM12868	blood:	n/a	n/a
7	CTCF	chr1:246945840-246945990	HMF	breast:	n/a	n/a
8	CTCF	chr1:246946080-246946230	AG04450	lung:	n/a	n/a
9	CTCF	chr1:246948020-246948170	GM12874	blood:	n/a	n/a
10	CTCF	chr1:246948260-246948410	HUVEC	blood vessel:	n/a	chr1:246948379-246948392 chr1:246948379-246948388
11	CTCF	chr1:246945860-246946010	HPAF	blood vessel:	n/a	n/a
12	CTCF	chr1:246945905-246945966	GM19239	blood:	n/a	n/a
13	CTCF	chr1:246946060-246946210	HPAF	blood vessel:	n/a	n/a
14	CTCF	chr1:246945960-246946110	HBMEC	blood vessel:	n/a	n/a
15	CTCF	chr1:246948160-246948310	HUVEC	blood vessel:	n/a	n/a
16	CTCF	chr1:246945980-246946130	HCPEpiC	choroid plexus:	n/a	n/a
17	CTCF	chr1:246946060-246946210	HMF	breast:	n/a	n/a
18	CTCF	chr1:246948300-246948450	GM12871	blood:	n/a	chr1:246948379-246948392 chr1:246948379-246948388
19	CTCF	chr1:246948520-246948670	AoAF	blood vessel:	n/a	n/a
20	CTCF	chr1:246945860-246946010	HPF	lung:	n/a	n/a
21	CTCF	chr1:246948080-246948230	GM12865	blood:	n/a	n/a
22	E2F6	chr1:246945732-246946007	K562	blood:	n/a	n/a
23	E2F6	chr1:246948020-246948163	K562	blood:	n/a	n/a
24	ELF1	chr1:246948179-246948459	GM12878	blood:	n/a	chr1:246948354-246948367 chr1:246948357-246948366 chr1:246948315-246948324
25	ELF1	chr1:246948213-246948519	K562	blood:	n/a	chr1:246948354-246948367 chr1:246948357-246948366 chr1:246948315-246948324
26	FOSL2	chr1:246946102-246946919	HepG2	liver:	n/a	n/a
27	FOSL2	chr1:246948503-246949443	HepG2	liver:	n/a	chr1:246948712-246948720 chr1:246948713-246948720 chr1:246948708-246948719
28	FOSL2	chr1:246946225-246946826	HepG2	liver:	n/a	n/a
29	FOXA1	chr1:246946300-246946837	HepG2	liver:	n/a	n/a
30	FOXP2	chr1:246945778-246946287	PFSK-1	brain:	n/a	n/a
31	GABPA	chr1:246946410-246946804	Hela-S3	cervix:	n/a	n/a
32	GABPA	chr1:246946349-246946694	HepG2	liver:	n/a	n/a
33	HEY1	chr1:246946228-246946847	HepG2	liver:	n/a	n/a
34	HEY1	chr1:246946372-246946755	K562	blood:	n/a	n/a
35	JUND	chr1:246945443-246945712	K562	blood:	n/a	n/a
36	JUND	chr1:246946383-246946759	HepG2	liver:	n/a	n/a
37	MAFF	chr1:246945637-246945641	HepG2	liver:	n/a	n/a
38	MAFF	chr1:246945458-246945663	K562	blood:	n/a	n/a
39	MAFK	chr1:246945495-246945622	HepG2	liver:	n/a	n/a
40	MAFK	chr1:246945991-246946060	HepG2	liver:	n/a	n/a
41	MAFK	chr1:246945981-246946121	HepG2	liver:	n/a	n/a
42	MAX	chr1:246945640-246945929	K562	blood:	n/a	n/a
43	MAX	chr1:246948446-246948687	K562	blood:	n/a	n/a
44	MAX	chr1:246945430-246946342	NB4	blood:	n/a	n/a
45	MAX	chr1:246947918-246948800	NB4	blood:	n/a	chr1:246948130-246948140 chr1:246948123-246948139
46	MAX	chr1:246945972-246946272	K562	blood:	n/a	n/a
47	MAX	chr1:246947451-246948343	K562	blood:	n/a	chr1:246948130-246948140 chr1:246948123-246948139 chr1:246947801-246947808
48	MAZ	chr1:246948171-246948475	K562	blood:	n/a	n/a
49	MAZ	chr1:246948254-246948330	GM12878	blood:	n/a	n/a
50	MYC	chr1:246945439-246946283	NB4	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:246948597-246948647	U87	brain:	n/a
2	chr1:246948597-246948647	HNPCEpiC	eye:	n/a
3	chr1:246948597-246948647	GM12878	blood:	n/a
4	chr1:246948597-246948647	HRCEpiC	kidney:	n/a
5	chr1:246948597-246948647	RPTEC	kidney:	n/a
6	chr1:246948597-246948647	GM12891	blood:	n/a
7	chr1:246948597-246948647	HRPEpiC	eye:	n/a
8	chr1:246948597-246948647	MCF10A-Er-Src	breast:	n/a
9	chr1:246948597-246948647	HCF	heart:	n/a
10	chr1:246948597-246948647	PrEC	prostate:	n/a
11	chr1:246948597-246948647	A549	lung:	n/a
12	chr1:246948597-246948647	NB4	blood:	n/a
13	chr1:246948597-246948647	Caco-2	colon:	n/a
14	chr1:246948597-246948647	SK-N-SH	brain:	n/a
15	chr1:246948597-246948647	HIPEpiC	eye:	n/a
16	chr1:246948597-246948647	Jurkat	blood:	n/a
17	chr1:246948597-246948647	HEK293	kidney:	embryo
18	chr1:246948597-246948647	ECC-1	luminal epithelium:	n/a
19	chr1:246948597-246948647	SKMC	muscle:	n/a
20	chr1:246948597-246948647	BE2_C	brain:	n/a
21	chr1:246948597-246948647	NH-A	brain:	n/a
22	chr1:246948597-246948647	HCM	heart:	n/a
23	chr1:246948597-246948647	NT2-D1	testis:	n/a
24	chr1:246948597-246948647	AG04450	lung:	fetal
25	chr1:246948597-246948647	GM06990	blood:	n/a
26	chr1:246948597-246948647	HAEpiC	amniotic membrane:	n/a
27	chr1:246948597-246948647	GM19239	blood:	n/a
28	chr1:246948597-246948647	HepG2	liver:	n/a
29	chr1:246948597-246948647	HRE	kidney:	n/a
30	chr1:246948597-246948647	AG09309	skin:	n/a
31	chr1:246948597-246948647	MCF-7	breast:	n/a
32	chr1:246948597-246948647	NHDF-neo	bronchial:	n/a
33	chr1:246948597-246948647	SAEC	small airway:	n/a
34	chr1:246948597-246948647	ovcar-3	ovarian:	n/a
35	chr1:246948597-246948647	HCT-116	colon:	n/a
36	chr1:246948597-246948647	BJ	skin:	n/a
37	chr1:246948597-246948647	IMR90	lung:	fetal
38	chr1:246948597-246948647	PFSK-1	brain:	n/a
39	chr1:246948597-246948647	GM12892	blood:	n/a
40	chr1:246948597-246948647	SK-N-MC	brain:	n/a
41	chr1:246948597-246948647	HCPEpiC	choroid plexus:	n/a
42	chr1:246948597-246948647	AG10803	skin:	n/a
43	chr1:246948597-246948647	PANC-1	pancreas:	n/a
44	chr1:246948597-246948647	T-47D	breast:	n/a
45	chr1:246948597-246948647	SK-N-SH_RA	brain:	n/a
46	chr1:246948597-246948647	HMEC	breast:	n/a
47	chr1:246948597-246948647	LNCaP	prostate:	n/a
48	chr1:246948597-246948647	HL-60	blood:	n/a
49	chr1:246948597-246948647	CMK	blood:	n/a
50	chr1:246948597-246948647	Hepatocyte	liver:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:246942351..246945041-chr1:246952061..246954954,2	K562	blood:
2	chr1:246939030..246940776-chr1:246947263..246949787,2	MCF-7	breast:
3	chr1:246940173..246942753-chr1:246943130..246945283,2	MCF-7	breast:
4	chr1:246941244..246944008-chr1:246946969..246949951,3	MCF-7	breast:
5	chr1:246947863..246950737-chr1:246955534..246958026,3	K562	blood:
6	chr1:246946643..246948588-chr1:247104112..247106785,2	K562	blood:
7	chr1:246944573..246947572-chr1:246947936..246950947,5	K562	blood:
8	chr1:246943277..246944793-chr1:246945937..246947774,2	K562	blood:
9	chr1:246947185..246952305-chr1:246952338..246955724,5	K562	blood:
10	chr1:246934177..246937192-chr1:246941017..246944440,4	K562	blood:
11	chr1:246941558..246944485-chr20:45985608..45987605,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SCCPDH-1	chr1:246946701-246947345	NONHSAT010736
2	lnc-SCCPDH-1	chr1:246947183-246947345	NONHSAT010737
3	lnc-SCCPDH-1	chr1:246947036-246947345	XLOC_000643
4	lnc-SCCPDH-1	chr1:246947201-246947345	NONHSAT010738

No data

Variant related genes	Relation type
KIF28P	TF binding region
ENSG00000227953	TF binding region
KIF28P	CpG island
ENSG00000227953	CpG island
ENSG00000223519	chromatin interactions
ENSG00000227953	chromatin interactions
ENSG00000260855	chromatin interactions

Extended variants
information (count: 226 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:226 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs532037958	chr1:246944451-246944452	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs548852116	chr1:246944493-246944494	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs7534805	chr1:246944502-246944503	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs544026977	chr1:246944512-246944513	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs144358314	chr1:246944536-246944537	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs562324302	chr1:246944606-246944607	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs570843860	chr1:246944664-246944665	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs539589165	chr1:246944681-246944682	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs6666756	chr1:246944735-246944736	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs575984293	chr1:246944746-246944747	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs535467567	chr1:246944765-246944766	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs575372101	chr1:246944788-246944789	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs142752852	chr1:246944789-246944790	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs7535104	chr1:246944812-246944813	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs540847772	chr1:246944887-246944888	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs183208797	chr1:246944913-246944914	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs112927627	chr1:246944965-246944966	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs147367179	chr1:246944981-246944982	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs34526093	chr1:246945071-246945072	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs77829671	chr1:246945110-246945111	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs544464570	chr1:246945154-246945155	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs542707012	chr1:246945160-246945161	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs562214206	chr1:246945165-246945166	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs139469308	chr1:246945175-246945176	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs547668585	chr1:246945210-246945211	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs545927281	chr1:246945214-246945215	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs562654229	chr1:246945215-246945216	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs539649413	chr1:246945235-246945236	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs549825055	chr1:246945245-246945246	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs562993042	chr1:246945264-246945265	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs576421131	chr1:246945287-246945288	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs561177407	chr1:246945294-246945295	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs542314388	chr1:246945342-246945343	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs371450684	chr1:246945350-246945351	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs572231995	chr1:246945358-246945359	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs534958089	chr1:246945371-246945372	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs142526267	chr1:246945380-246945381	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs528494907	chr1:246945382-246945383	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs113175588	chr1:246945436-246945437	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs532927992	chr1:246945474-246945475	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs543649749	chr1:246945511-246945512	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs546642628	chr1:246945517-246945518	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs187948392	chr1:246945522-246945523	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs565593955	chr1:246945546-246945547	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs12058428	chr1:246945567-246945568	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs529947711	chr1:246945569-246945570	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs192857478	chr1:246945572-246945573	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs369157585	chr1:246945588-246945589	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs374267849	chr1:246945642-246945643	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs548025285	chr1:246945648-246945649	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Neuroblastoma	21899760	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	20729466	CNVD
Testicular germ cell tumor	18059402	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Basal cell lymphoma	17053054	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16616336	CNVD
Ovarian cancer	21720365	CNVD
Glioblastoma multiforme	22291905	CNVD
Myelofibrosis	22110671	CNVD
Disease	21936942	CNVD
laryngomalacia	21936942	CNVD
GLUT3 deficiency syndrome	20509907	CNVD
Developmental delay	21373258	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Developmental delay	19490664	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Cutaneous malignant melanoma	18794153	CNVD
Astrocytoma	17934521	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Breast cancer	20409316	CNVD
Fibroblasts	17951408	CNVD
Lung cancer	17951408	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD

Chromatin state (count:378 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:246888400-246946400	Weak transcription	Small Intestine	intestine
2	chr1:246888600-246945600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr1:246902800-246952800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:246905000-246945800	Weak transcription	Psoas Muscle	Psoas
5	chr1:246921600-246945800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr1:246922200-246944600	Strong transcription	Fetal Muscle Trunk	muscle
7	chr1:246923200-246945000	Strong transcription	Fetal Muscle Leg	muscle
8	chr1:246924400-246945800	Weak transcription	Primary B cells from cord blood	blood
9	chr1:246925200-246952200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr1:246928800-246944800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr1:246932400-246945800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr1:246932400-246952000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr1:246932600-246948000	Strong transcription	Liver	Liver
14	chr1:246932600-246948600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr1:246932600-246948600	Weak transcription	Esophagus	oesophagus
16	chr1:246932800-246945000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr1:246932800-246945600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr1:246932800-246945800	Weak transcription	H1 Cell Line	embryonic stem cell
19	chr1:246932800-246948800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr1:246932800-246952400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr1:246932800-246956400	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr1:246933200-246945800	Weak transcription	Colon Smooth Muscle	Colon
23	chr1:246934400-246944800	Strong transcription	Fetal Intestine Large	intestine
24	chr1:246938400-246945800	Strong transcription	Fetal Stomach	stomach
25	chr1:246938400-246947200	Strong transcription	Fetal Intestine Small	intestine
26	chr1:246938600-246944600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr1:246938800-246945000	Strong transcription	Placenta	Placenta
28	chr1:246939000-246944600	Strong transcription	Skeletal Muscle Female	skeletal muscle
29	chr1:246939000-246944800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr1:246939000-246945600	Weak transcription	Fetal Heart	heart
31	chr1:246939200-246945000	Strong transcription	Stomach Smooth Muscle	stomach
32	chr1:246940200-246945800	Weak transcription	GM12878-XiMat	blood
33	chr1:246940200-246947600	Weak transcription	HUVEC	blood vessel
34	chr1:246940200-246948800	Weak transcription	Fetal Brain Male	brain
35	chr1:246940400-246944800	Weak transcription	NHDF-Ad	bronchial
36	chr1:246940400-246945600	Weak transcription	Right Ventricle	heart
37	chr1:246940400-246945800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr1:246940400-246949000	Weak transcription	Rectal Smooth Muscle	rectum
39	chr1:246940600-246944600	Weak transcription	Lung	lung
40	chr1:246940600-246944800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
41	chr1:246940600-246945600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
42	chr1:246940600-246945800	Weak transcription	Primary T cells from cord blood	blood
43	chr1:246940600-246945800	Weak transcription	Ovary	ovary
44	chr1:246940600-246945800	Weak transcription	Rectal Mucosa Donor 29	rectum
45	chr1:246940600-246948600	Weak transcription	Brain Angular Gyrus	brain
46	chr1:246940600-246948800	Weak transcription	Brain Cingulate Gyrus	brain
47	chr1:246940600-246948800	Weak transcription	Fetal Kidney	kidney
48	chr1:246940800-246945000	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr1:246940800-246945000	Weak transcription	HepG2	liver
50	chr1:246940800-246945200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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