No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs553306245 |
chr9:86237008-86237009 |
Weak transcription Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs559227987 |
chr9:86237009-86237010 |
Weak transcription Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs533037184 |
chr9:86237032-86237033 |
Weak transcription Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs566668427 |
chr9:86237046-86237047 |
Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs182294265 |
chr9:86237056-86237057 |
Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs557792387 |
chr9:86237110-86237111 |
Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs146646742 |
chr9:86237132-86237133 |
Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs376091674 |
chr9:86237137-86237138 |
Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs186705308 |
chr9:86237174-86237175 |
Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs550078247 |
chr9:86237189-86237190 |
Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs10118651 |
chr9:86237198-86237199 |
Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
12 |
rs535485406 |
chr9:86237216-86237217 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs143419603 |
chr9:86237237-86237238 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs566083924 |
chr9:86237240-86237241 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs539910173 |
chr9:86237306-86237307 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs554745230 |
chr9:86237359-86237360 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs557698594 |
chr9:86237405-86237406 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs576328445 |
chr9:86237411-86237412 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs574848554 |
chr9:86237444-86237445 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs537165975 |
chr9:86237621-86237622 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs189604588 |
chr9:86237635-86237636 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs147983356 |
chr9:86237687-86237688 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs573977228 |
chr9:86237703-86237704 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs111705935 |
chr9:86237730-86237731 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs540456906 |
chr9:86237837-86237838 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs72138468 |
chr9:86237896-86237897 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs34621288 |
chr9:86237903-86237904 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs560110573 |
chr9:86237917-86237918 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs148724222 |
chr9:86237951-86237952 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs367733214 |
chr9:86238025-86238026 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs563011090 |
chr9:86238041-86238042 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs116949863 |
chr9:86238047-86238048 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs543564853 |
chr9:86238053-86238054 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs562092273 |
chr9:86238067-86238068 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs529584491 |
chr9:86238084-86238085 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs2811903 |
chr9:86238086-86238087 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs566045982 |
chr9:86238097-86238098 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs533148684 |
chr9:86238124-86238125 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs369212033 |
chr9:86238160-86238161 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs570114655 |
chr9:86238216-86238217 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs537287042 |
chr9:86238239-86238240 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs76971639 |
chr9:86238251-86238252 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs377764359 |
chr9:86238256-86238257 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs150119668 |
chr9:86238271-86238272 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs373239324 |
chr9:86238329-86238330 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs377312150 |
chr9:86238352-86238353 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs138804746 |
chr9:86238432-86238433 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs552964194 |
chr9:86238460-86238461 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs577582029 |
chr9:86238615-86238616 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs544639350 |
chr9:86238660-86238661 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|