The 2.0 version of rSNPBase

Variant report

Variant esv3410961
Chromosome Location chr11:105939392-105939841
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:105920800-105947000 Weak transcription Ovary ovary
2 chr11:105921400-105946800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr11:105921400-105946800 Weak transcription Fetal Intestine Small intestine
4 chr11:105921600-105945600 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr11:105922200-105947000 Weak transcription Psoas Muscle Psoas
6 chr11:105922400-105946800 Weak transcription Adipose Nuclei Adipose
7 chr11:105922800-105946800 Weak transcription Primary T cells from cord blood blood
8 chr11:105922800-105947200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr11:105923000-105946800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr11:105923000-105946800 Weak transcription Stomach Smooth Muscle stomach
11 chr11:105923200-105946600 Weak transcription Primary B cells from cord blood blood
12 chr11:105923800-105946200 Weak transcription Colon Smooth Muscle Colon
13 chr11:105924000-105947000 Weak transcription Primary T cells fromperipheralblood blood
14 chr11:105924400-105947200 Weak transcription Aorta Aorta
15 chr11:105924600-105947000 Weak transcription Left Ventricle heart
16 chr11:105924800-105943600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr11:105925400-105947000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr11:105925800-105946800 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr11:105926000-105946800 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr11:105926200-105947000 Weak transcription Pancreas Pancrea
21 chr11:105926800-105946800 Weak transcription Primary hematopoietic stem cells blood
22 chr11:105927000-105946800 Weak transcription Rectal Smooth Muscle rectum
23 chr11:105927200-105946200 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr11:105927200-105946800 Weak transcription Duodenum Mucosa Duodenum
25 chr11:105927800-105947200 Weak transcription Lung lung
26 chr11:105928600-105946800 Weak transcription Liver Liver
27 chr11:105929800-105947000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr11:105930800-105943600 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr11:105931000-105946800 Weak transcription Fetal Kidney kidney
30 chr11:105932400-105942800 Weak transcription Brain Cingulate Gyrus brain
31 chr11:105932600-105941400 Weak transcription Brain Substantia Nigra brain
32 chr11:105932600-105946200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr11:105932800-105943800 Weak transcription Brain Inferior Temporal Lobe brain
34 chr11:105934200-105946800 Weak transcription Primary B cells from peripheral blood blood
35 chr11:105937200-105943800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr11:105938000-105946800 Weak transcription Fetal Lung lung
37 chr11:105938600-105939600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
38 chr11:105938600-105941400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr11:105939200-105939600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr11:105939600-105946200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr11:105939600-105946400 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr11:105939800-105942800 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015