No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs554738816 |
chr19:19515827-19515828 |
Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs574508985 |
chr19:19515840-19515841 |
Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs180925247 |
chr19:19515892-19515893 |
Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs557236304 |
chr19:19515921-19515922 |
Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs577163303 |
chr19:19516065-19516066 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs546169195 |
chr19:19516074-19516075 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs184987932 |
chr19:19516099-19516100 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs528655631 |
chr19:19516179-19516180 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs541927344 |
chr19:19516188-19516189 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs561729467 |
chr19:19516191-19516192 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs530526941 |
chr19:19516220-19516221 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs550545910 |
chr19:19516233-19516234 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs570454751 |
chr19:19516403-19516404 |
Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs12983940 |
chr19:19516431-19516432 |
Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
15 |
rs112014204 |
chr19:19516432-19516433 |
Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs199571047 |
chr19:19516433-19516434 |
Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs566684051 |
chr19:19516446-19516447 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs535261565 |
chr19:19516465-19516466 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs555056300 |
chr19:19516474-19516475 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs568171066 |
chr19:19516477-19516478 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs537143341 |
chr19:19516497-19516498 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs184011618 |
chr19:19516506-19516507 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs368941377 |
chr19:19516516-19516517 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs540153250 |
chr19:19516553-19516554 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs553359444 |
chr19:19516587-19516588 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs573397720 |
chr19:19516632-19516633 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs542015909 |
chr19:19516677-19516678 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs561768263 |
chr19:19516719-19516720 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs113377336 |
chr19:19516732-19516733 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs376005345 |
chr19:19516819-19516820 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs564101178 |
chr19:19516862-19516863 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs369338630 |
chr19:19516865-19516866 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs546889475 |
chr19:19516982-19516983 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs560148785 |
chr19:19517048-19517049 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs140702307 |
chr19:19517054-19517055 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs371213726 |
chr19:19517055-19517056 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs372814272 |
chr19:19517135-19517136 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs548813062 |
chr19:19517164-19517165 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs568700562 |
chr19:19517167-19517168 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs188552254 |
chr19:19517169-19517170 |
Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs535696257 |
chr19:19517260-19517261 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs375975666 |
chr19:19517261-19517262 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs1529745 |
chr19:19517325-19517326 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
44 |
rs532321465 |
chr19:19517351-19517352 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs570533107 |
chr19:19517369-19517370 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs138210561 |
chr19:19517430-19517431 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs149598567 |
chr19:19517467-19517468 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs143231216 |
chr19:19517562-19517563 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs536142438 |
chr19:19517609-19517610 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs139069778 |
chr19:19517633-19517634 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|