Variant report

Variant	esv3411139
Chromosome Location	chr11:92875445-92875853
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:29 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs61918949	chr11:92875461-92875462	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs61918950	chr11:92875466-92875467	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs61918951	chr11:92875476-92875477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs61918952	chr11:92875477-92875478	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs61918953	chr11:92875479-92875480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs61918954	chr11:92875505-92875506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs61918955	chr11:92875507-92875508	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs61918956	chr11:92875508-92875509	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs61918957	chr11:92875511-92875512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs575927542	chr11:92875516-92875517	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs574703329	chr11:92875538-92875539	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs546154881	chr11:92875541-92875542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs562117681	chr11:92875547-92875548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs539751150	chr11:92875552-92875553	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs573451663	chr11:92875555-92875556	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs546489816	chr11:92875561-92875562	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs562054746	chr11:92875568-92875569	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs532950866	chr11:92875569-92875570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs548611946	chr11:92875570-92875571	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs552614313	chr11:92875571-92875572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs576704300	chr11:92875573-92875574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs559550410	chr11:92875575-92875576	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs563492188	chr11:92875597-92875598	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs528035987	chr11:92875606-92875607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs558101982	chr11:92875610-92875611	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs541391730	chr11:92875617-92875618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs563356917	chr11:92875618-92875619	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs371088782	chr11:92875631-92875632	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs375347275	chr11:92875654-92875655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Prostate cancer	18632612	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Mental retardation	21062444	CNVD
Cancer	21499728	CNVD
Breast cancer	19181860	CNVD
Breast cancer	17603634	CNVD
Mantle cell lymphoma	19029149	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:92862800-92880400	Weak transcription	Aorta	Aorta
2	chr11:92864200-92876400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr11:92866600-92880000	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr11:92867200-92896400	Weak transcription	Primary B cells from peripheral blood	blood
5	chr11:92868000-92876400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr11:92868000-92889000	Weak transcription	Adipose Nuclei	Adipose
7	chr11:92868400-92880000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr11:92868400-92914600	Weak transcription	Brain Substantia Nigra	brain
9	chr11:92874000-92880400	Weak transcription	NH-A	brain
10	chr11:92875000-92878400	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr11:92875000-92892800	Weak transcription	Primary B cells from cord blood	blood
12	chr11:92875400-92910400	Weak transcription	Brain Cingulate Gyrus	brain
13	chr11:92875600-92876400	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr11:92875800-92880200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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