Variant report

Variant	esv3412564
Chromosome Location	chr20:41817238-41820486
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:36)
CpG islands
(count:671)
Chromatin interactive
region (count:4)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:36 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr20:41818772-41819165	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr20:41817618-41817818	H1-hESC	embryonic stem cell:	n/a	n/a
3	CEBPB	chr20:41818934-41819178	H1-hESC	embryonic stem cell:	n/a	n/a
4	CTBP2	chr20:41817711-41818431	H1-hESC	embryonic stem cell:	n/a	n/a
5	CTCF	chr20:41820440-41820590	GM12873	blood:	n/a	n/a
6	CTCF	chr20:41820340-41820490	BE2_C	brain:	n/a	n/a
7	CTCF	chr20:41820240-41820390	GM12873	blood:	n/a	n/a
8	CTCF	chr20:41819700-41819850	GM12865	blood:	n/a	chr20:41819807-41819814
9	CTCF	chr20:41819900-41820050	MCF-7	breast:	n/a	n/a
10	CTCF	chr20:41820000-41820150	HepG2	liver:	n/a	n/a
11	CTCF	chr20:41818841-41818891	Spleen_OC	spleen:	n/a	n/a
12	CTCF	chr20:41820434-41821088	SK-N-SH	brain:	n/a	n/a
13	CTCF	chr20:41816020-41817330	SK-N-SH	brain:	n/a	chr20:41816561-41816574 chr20:41816560-41816576 chr20:41816559-41816577 chr20:41816561-41816574
14	CTCF	chr20:41819940-41820090	A549	lung:	n/a	n/a
15	CTCF	chr20:41820431-41821035	MCF-7	breast:	n/a	n/a
16	CTCF	chr20:41819880-41820030	HEK293	kidney:	n/a	n/a
17	CTCF	chr20:41819940-41820090	GM12873	blood:	n/a	n/a
18	CTCF	chr20:41818807-41818948	H1-hESC	embryonic stem cell:	n/a	n/a
19	EGR1	chr20:41818791-41818994	K562	blood:	n/a	chr20:41818792-41818814 chr20:41818893-41818902 chr20:41818798-41818807
20	EGR1	chr20:41818658-41819065	H1-hESC	embryonic stem cell:	n/a	chr20:41818792-41818814 chr20:41819041-41819051 chr20:41818893-41818902 chr20:41818798-41818807
21	POLR2A	chr20:41817661-41818322	H1-neurons	neurons:	n/a	n/a
22	POLR2A	chr20:41816483-41817382	H1-neurons	neurons:	n/a	n/a
23	POLR2A	chr20:41818609-41819065	H1-neurons	neurons:	n/a	n/a
24	POLR2A	chr20:41818335-41819058	H1-neurons	neurons:	n/a	n/a
25	POLR2A	chr20:41817807-41818274	H1-neurons	neurons:	n/a	n/a
26	POLR2A	chr20:41816498-41817319	H1-neurons	neurons:	n/a	n/a
27	RAD21	chr20:41820439-41821110	SK-N-SH	brain:	n/a	chr20:41820584-41820593 chr20:41820536-41820546
28	RAD21	chr20:41815974-41817339	SK-N-SH	brain:	n/a	chr20:41816557-41816576 chr20:41817274-41817287
29	RAD21	chr20:41816209-41817252	H1-hESC	embryonic stem cell:	n/a	chr20:41816557-41816576
30	RAD21	chr20:41820458-41821067	MCF-7	breast:	n/a	chr20:41820584-41820593 chr20:41820536-41820546
31	SIN3A	chr20:41817670-41818020	H1-hESC	embryonic stem cell:	n/a	chr20:41817872-41817885
32	SIN3A	chr20:41818821-41818835	H1-hESC	embryonic stem cell:	n/a	n/a
33	SMC3	chr20:41816128-41817262	SK-N-SH	brain:	n/a	chr20:41816561-41816571 chr20:41816561-41816575
34	SUZ12	chr20:41816560-41819205	NT2-D1	testis:	n/a	n/a
35	WRNIP1	chr20:41820384-41820385	GM12878	blood:	n/a	n/a
36	ZNF143	chr20:41818886-41818975	H1-hESC	embryonic stem cell:	n/a	n/a

(count:671 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr20:41818756-41818806	ECC-1	luminal epithelium:	n/a
2	chr20:41818788-41818838	NH-A	brain:	n/a
3	chr20:41817801-41817851	ECC-1	luminal epithelium:	n/a
4	chr20:41818358-41818408	HEEpiC	esophagus:	n/a
5	chr20:41818788-41818838	SK-N-SH_RA	brain:	n/a
6	chr20:41817903-41817953	MCF-7	breast:	n/a
7	chr20:41818756-41818806	PrEC	prostate:	n/a
8	chr20:41818770-41818820	PANC-1	pancreas:	n/a
9	chr20:41818358-41818408	NH-A	brain:	n/a
10	chr20:41818905-41818955	HMEC	breast:	n/a
11	chr20:41818356-41818406	HNPCEpiC	eye:	n/a
12	chr20:41818756-41818806	SKMC	muscle:	n/a
13	chr20:41817801-41817851	H1-hESC	embryonic stem cell:	embryo
14	chr20:41818788-41818838	SKMC	muscle:	n/a
15	chr20:41818788-41818838	ProgFib	skin:	n/a
16	chr20:41818905-41818955	CMK	blood:	n/a
17	chr20:41817476-41817526	Hela-S3	cervix:	n/a
18	chr20:41817476-41817526	HRPEpiC	eye:	n/a
19	chr20:41819125-41819175	U87	brain:	n/a
20	chr20:41817476-41817526	HPAEpiC	pulmonary alveolar:	n/a
21	chr20:41817476-41817526	NB4	blood:	n/a
22	chr20:41818574-41818624	HCF	heart:	n/a
23	chr20:41818770-41818820	HCT-116	colon:	n/a
24	chr20:41817903-41817953	PrEC	prostate:	n/a
25	chr20:41817476-41817526	NHBE	bronchial:	n/a
26	chr20:41818770-41818820	HCM	heart:	n/a
27	chr20:41818756-41818806	MCF10A-Er-Src	breast:	n/a
28	chr20:41817801-41817851	HUVEC	blood vessel:	n/a
29	chr20:41818358-41818408	LNCaP	prostate:	n/a
30	chr20:41818756-41818806	Hela-S3	cervix:	n/a
31	chr20:41817801-41817851	GM12891	blood:	n/a
32	chr20:41817476-41817526	IMR90	lung:	fetal
33	chr20:41817476-41817526	T-47D	breast:	n/a
34	chr20:41819125-41819175	GM06990	blood:	n/a
35	chr20:41818358-41818408	ProgFib	skin:	n/a
36	chr20:41818356-41818406	HCT-116	colon:	n/a
37	chr20:41818905-41818955	GM12891	blood:	n/a
38	chr20:41818770-41818820	Jurkat	blood:	n/a
39	chr20:41818770-41818820	NT2-D1	testis:	n/a
40	chr20:41818788-41818838	AG10803	skin:	n/a
41	chr20:41818356-41818406	NT2-D1	testis:	n/a
42	chr20:41818358-41818408	HPAEpiC	pulmonary alveolar:	n/a
43	chr20:41817801-41817851	GM12878	blood:	n/a
44	chr20:41818574-41818624	H1-hESC	embryonic stem cell:	embryo
45	chr20:41818756-41818806	HepG2	liver:	n/a
46	chr20:41818788-41818838	K562	blood:	n/a
47	chr20:41818356-41818406	AG04449	skin:	fetal
48	chr20:41819125-41819175	GM12892	blood:	n/a
49	chr20:41818356-41818406	PFSK-1	brain:	n/a
50	chr20:41817903-41817953	AG09319	gingival:	n/a

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr20:41820295..41821061-chr20:42038025..42038531,2	MCF-7	breast:
2	chr20:41820391..41820963-chr20:41872072..41872972,2	MCF-7	breast:
3	chr20:41820316..41821010-chr20:42037578..42038228,2	MCF-7	breast:
4	chr20:40584767..40585608-chr20:41820301..41820945,3	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SRSF6-1	chr20:41818862-41818890	ENSG00000233508.1
2	lnc-SRSF6-1	chr20:41818756-41818890	NONHSAT079811

No data

Variant related genes	Relation type
PTPRT	TF binding region
ENSG00000233508	TF binding region
PTPRT	CpG island
ENSG00000233508	CpG island

Extended variants
information (count: 103 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:103 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs370475573	chr20:41817306-41817307	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs146758896	chr20:41817321-41817322	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs530517974	chr20:41817324-41817325	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs6030686	chr20:41817327-41817328	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs8122910	chr20:41817374-41817375	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs754883	chr20:41817383-41817384	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs742066	chr20:41817394-41817395	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs550638101	chr20:41817396-41817397	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs570471317	chr20:41817434-41817435	Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs539697443	chr20:41817464-41817465	Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs546895428	chr20:41817499-41817500	Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
12	rs5841498	chr20:41817502-41817503	Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
13	rs11445617	chr20:41817504-41817505	Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
14	rs566514419	chr20:41817510-41817511	Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
15	rs535673470	chr20:41817607-41817608	Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs552985221	chr20:41817646-41817647	Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs554743089	chr20:41817658-41817659	Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs574637651	chr20:41817680-41817681	Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs112425231	chr20:41817877-41817878	Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs111781998	chr20:41817878-41817879	Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs75204617	chr20:41817907-41817908	Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
22	rs140446591	chr20:41817927-41817928	Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
23	rs576827138	chr20:41817950-41817951	Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
24	rs367629891	chr20:41818034-41818035	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs112424528	chr20:41818051-41818052	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs58874261	chr20:41818065-41818066	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs573337407	chr20:41818091-41818092	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs542457498	chr20:41818104-41818105	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs145723924	chr20:41818120-41818121	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs530580828	chr20:41818136-41818137	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs371421545	chr20:41818137-41818138	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs117637352	chr20:41818162-41818163	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs564041866	chr20:41818210-41818211	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs532972542	chr20:41818229-41818230	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs182498075	chr20:41818252-41818253	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs368546017	chr20:41818255-41818256	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs2867655	chr20:41818289-41818290	Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs113368305	chr20:41818647-41818648	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
39	rs535286617	chr20:41818695-41818696	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
40	rs549198840	chr20:41818857-41818858	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
41	rs573079745	chr20:41818862-41818863	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
42	rs568717101	chr20:41818867-41818868	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs115797857	chr20:41818894-41818895	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs13041366	chr20:41818919-41818920	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
45	rs557053135	chr20:41818940-41818941	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
46	rs570500669	chr20:41818942-41818943	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
47	rs187972115	chr20:41818945-41818946	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
48	rs553389934	chr20:41818946-41818947	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
49	rs6065588	chr20:41818989-41818990	Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs542169933	chr20:41819032-41819033	Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Urothelial carcinoma	21177765	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	21645411	CNVD
Autism	22495311	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	21693616	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
colon cancer	17210682	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	22028636	CNVD
Breast cancer	21264507	CNVD
Thyroid cancer	19087340	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Colorectal cancer	19359472	CNVD
Gastric cancer	17167181	CNVD
Myeloproliferative neoplasm	19047681	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Bladder cancer	21909424	CNVD
Breast cancer	17603634	CNVD
Melanoma	18172304	CNVD
Breast cancer	16608533	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	21364760	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17133270	CNVD
Oral cancer	21386901	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Ovarian cancer	19193619	CNVD
Breast cancer	21785460	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Leukemia	18628472	CNVD
Myelodysplastic syndrome	17634407	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Ductal carcinoma	22052326	CNVD
Prostate cancer	18632612	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Multiple myeloma	16616336	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Malignant melanoma	17260012	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Colorectal cancer	16774939	CNVD
Cervical cancer	21062161	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	20585902	CNVD
Ductal carcinoma	18381933	CNVD
Cancer	21129771	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	20864512	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	22860045	CNVD
Cervical cancer	16585170	CNVD
Developmental delay	21373258	CNVD
Breast cancer	21806811	CNVD
Mental retardation	17901693	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17157792	CNVD
Barrett''s esophagus	18559552	CNVD
Renal cell carcinoma	18765545	CNVD
Lung cancer	16740712	CNVD

Chromatin state (count:149 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:41815400-41819000	Active TSS	Breast Myoepithelial Primary Cells	Breast
2	chr20:41816600-41817400	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
3	chr20:41816600-41817600	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
4	chr20:41816600-41817800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
5	chr20:41816600-41817800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr20:41816600-41818000	Enhancers	Liver	Liver
7	chr20:41816600-41818200	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
8	chr20:41816600-41818200	Flanking Bivalent TSS/Enh	Fetal Brain Female	brain
9	chr20:41816600-41818800	Active TSS	Aorta	Aorta
10	chr20:41816600-41819000	Enhancers	Pancreas	Pancrea
11	chr20:41816600-41819200	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr20:41816600-41819400	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
13	chr20:41816600-41819400	Active TSS	Pancreatic Islets	Pancreatic Islet
14	chr20:41816800-41817400	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
15	chr20:41816800-41817400	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
16	chr20:41816800-41818000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
17	chr20:41816800-41818000	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
18	chr20:41816800-41818200	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
19	chr20:41816800-41818200	Bivalent Enhancer	Colon Smooth Muscle	Colon
20	chr20:41816800-41818200	Bivalent/Poised TSS	Fetal Thymus	thymus
21	chr20:41817000-41817400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr20:41817000-41817400	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
23	chr20:41817000-41817400	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
24	chr20:41817000-41817600	Bivalent Enhancer	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr20:41817000-41817800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr20:41817000-41817800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr20:41817000-41817800	Bivalent Enhancer	Esophagus	oesophagus
28	chr20:41817000-41817800	Bivalent/Poised TSS	Placenta	Placenta
29	chr20:41817000-41818400	Active TSS	Gastric	stomach
30	chr20:41817000-41819400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
31	chr20:41817000-41819400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
32	chr20:41817000-41819400	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr20:41817200-41817400	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr20:41817200-41817400	Flanking Active TSS	Brain Anterior Caudate	brain
35	chr20:41817200-41817600	Bivalent Enhancer	Adipose Nuclei	Adipose
36	chr20:41817200-41817600	Bivalent Enhancer	Duodenum Smooth Muscle	Duodenum
37	chr20:41817200-41817600	Bivalent Enhancer	Fetal Muscle Leg	muscle
38	chr20:41817200-41818000	Bivalent/Poised TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr20:41817200-41818000	Bivalent/Poised TSS	Brain Substantia Nigra	brain
40	chr20:41817200-41818200	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
41	chr20:41817200-41818400	Bivalent Enhancer	Fetal Brain Male	brain
42	chr20:41817200-41818800	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
43	chr20:41817200-41818800	Active TSS	Brain Inferior Temporal Lobe	brain
44	chr20:41817200-41818800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
45	chr20:41817200-41818800	Bivalent/Poised TSS	Thymus	Thymus
46	chr20:41817200-41819000	Bivalent/Poised TSS	Right Ventricle	heart
47	chr20:41817200-41819200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
48	chr20:41817200-41819200	Active TSS	Brain Angular Gyrus	brain
49	chr20:41817200-41819400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
50	chr20:41817200-41819400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell

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