Variant report

Variant	esv3412915
Chromosome Location	chr11:24326251-24328599
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 88 )
Associated
traits (count: 53 )

Variant overlapped rSNPs/rCNVs (count:88 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs546919384	chr11:24326289-24326290	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs560526082	chr11:24326305-24326306	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs532443203	chr11:24326334-24326335	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs557088557	chr11:24326349-24326350	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs187284750	chr11:24326372-24326373	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs569208617	chr11:24326373-24326374	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs192075662	chr11:24326375-24326376	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs548370873	chr11:24326395-24326396	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs568284162	chr11:24326436-24326437	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs534057523	chr11:24326479-24326480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs575071422	chr11:24326518-24326519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs137981736	chr11:24326535-24326536	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs539106451	chr11:24326554-24326555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs566913755	chr11:24326561-24326562	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs556126192	chr11:24326576-24326577	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs575339463	chr11:24326670-24326671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs111448872	chr11:24326671-24326672	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs200201875	chr11:24326679-24326680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs76049570	chr11:24326683-24326684	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs397732222	chr11:24326684-24326685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs534880829	chr11:24326754-24326755	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs541537848	chr11:24326804-24326805	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs371401317	chr11:24326832-24326833	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs60874167	chr11:24326833-24326834	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs571016179	chr11:24326834-24326835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs561126953	chr11:24326837-24326838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs12273441	chr11:24326848-24326849	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs71472789	chr11:24326850-24326851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs78038700	chr11:24326860-24326861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs71472790	chr11:24326862-24326863	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs12799219	chr11:24326875-24326876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs34303452	chr11:24326876-24326877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs372651052	chr11:24326979-24326980	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs560670786	chr11:24327000-24327001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs532845058	chr11:24327017-24327018	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs181805340	chr11:24327019-24327020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs562886415	chr11:24327054-24327055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs578005195	chr11:24327110-24327111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs201643229	chr11:24327229-24327230	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs201987469	chr11:24327233-24327234	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs548727215	chr11:24327240-24327241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs568245343	chr11:24327251-24327252	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs542446788	chr11:24327265-24327266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs186285525	chr11:24327276-24327277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs369740881	chr11:24327287-24327288	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs530983876	chr11:24327301-24327302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs570606436	chr11:24327378-24327379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs539727049	chr11:24327456-24327457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs555849341	chr11:24327464-24327465	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs575652038	chr11:24327482-24327483	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:53)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Multiple myeloma	16461302	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Myelofibrosis	22110671	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21364760	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:24324200-24331600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:24326000-24326400	Enhancers	Stomach Mucosa	stomach

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