Variant report

Variant	esv3413089
Chromosome Location	chr22:30888110-30921604
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr22:30893510-30894046	HepG2	liver:	n/a	n/a
2	ARID3A	chr22:30901009-30901341	HepG2	liver:	n/a	n/a
3	ARID3A	chr22:30900500-30900799	HepG2	liver:	n/a	n/a
4	BHLHE40	chr22:30901117-30901563	HepG2	liver:	n/a	chr22:30901234-30901250
5	BHLHE40	chr22:30902396-30902761	K562	blood:	n/a	n/a
6	CBX3	chr22:30902373-30902763	K562	blood:	n/a	n/a
7	CCNT2	chr22:30902413-30902823	K562	blood:	n/a	n/a
8	CEBPB	chr22:30900954-30901405	HepG2	liver:	n/a	chr22:30901193-30901204
9	CEBPB	chr22:30893596-30893763	HepG2	liver:	n/a	n/a
10	CEBPB	chr22:30900999-30901348	MCF-7	breast:	n/a	chr22:30901193-30901204
11	CEBPB	chr22:30904676-30905044	K562	blood:	n/a	chr22:30904856-30904867
12	CEBPB	chr22:30919661-30919954	K562	blood:	n/a	chr22:30919805-30919818 chr22:30919805-30919816 chr22:30919807-30919816
13	CEBPB	chr22:30919702-30919861	IMR90	lung:	n/a	chr22:30919805-30919818 chr22:30919805-30919816 chr22:30919807-30919816
14	CEBPB	chr22:30900909-30901392	Hela-S3	cervix:	n/a	chr22:30901193-30901204
15	CEBPB	chr22:30900913-30901381	HepG2	liver:	n/a	chr22:30901193-30901204
16	CEBPB	chr22:30901053-30901274	H1-hESC	embryonic stem cell:	n/a	chr22:30901193-30901204
17	CEBPB	chr22:30899005-30899240	HepG2	liver:	n/a	n/a
18	CEBPB	chr22:30904747-30905014	H1-hESC	embryonic stem cell:	n/a	chr22:30904856-30904867
19	CEBPB	chr22:30893524-30893879	HepG2	liver:	n/a	n/a
20	CEBPB	chr22:30901055-30901164	K562	blood:	n/a	n/a
21	CEBPB	chr22:30900517-30900747	HepG2	liver:	n/a	n/a
22	CEBPB	chr22:30904737-30905004	K562	blood:	n/a	chr22:30904856-30904867
23	CEBPB	chr22:30901710-30901840	Hela-S3	cervix:	n/a	n/a
24	CEBPB	chr22:30893546-30893849	MCF-7	breast:	n/a	n/a
25	CEBPB	chr22:30900953-30901388	HepG2	liver:	n/a	chr22:30901193-30901204
26	CEBPB	chr22:30900971-30901352	HepG2	liver:	n/a	chr22:30901193-30901204
27	CEBPB	chr22:30904744-30904948	A549	lung:	n/a	chr22:30904856-30904867
28	CEBPB	chr22:30904753-30904961	IMR90	lung:	n/a	chr22:30904856-30904867
29	CEBPB	chr22:30919705-30919888	A549	lung:	n/a	chr22:30919805-30919818 chr22:30919805-30919816 chr22:30919807-30919816
30	CEBPB	chr22:30904738-30904957	MCF-7	breast:	n/a	chr22:30904856-30904867
31	CEBPB	chr22:30919655-30919957	HepG2	liver:	n/a	chr22:30919805-30919818 chr22:30919805-30919816 chr22:30919807-30919816
32	CEBPB	chr22:30919626-30920003	K562	blood:	n/a	chr22:30919805-30919818 chr22:30919805-30919816 chr22:30919807-30919816
33	CEBPB	chr22:30904691-30905038	HepG2	liver:	n/a	chr22:30904856-30904867
34	CEBPB	chr22:30916120-30916370	K562	blood:	n/a	n/a
35	CEBPB	chr22:30904808-30904883	Hela-S3	cervix:	n/a	chr22:30904856-30904867
36	CEBPD	chr22:30900991-30901313	HepG2	liver:	n/a	n/a
37	CEBPD	chr22:30901059-30901454	HepG2	liver:	n/a	n/a
38	CEBPD	chr22:30902325-30902790	K562	blood:	n/a	n/a
39	CHD2	chr22:30901211-30901782	Hela-S3	cervix:	n/a	n/a
40	CHD2	chr22:30901151-30901460	HepG2	liver:	n/a	n/a
41	CREB1	chr22:30893532-30893910	HepG2	liver:	n/a	n/a
42	CREB1	chr22:30901411-30901788	A549	lung:	n/a	n/a
43	CTCF	chr22:30901911-30902013	Kidney_OC	kidney:	n/a	n/a
44	CTCF	chr22:30904060-30904210	GM12871	blood:	n/a	n/a
45	CTCF	chr22:30901946-30902009	GM10248	blood:	n/a	n/a
46	CUX1	chr22:30902489-30902726	K562	blood:	n/a	n/a
47	E2F4	chr22:30892884-30893033	MCF10A-Er-Src	breast:	n/a	n/a
48	E2F6	chr22:30901492-30901842	A549	lung:	n/a	chr22:30901641-30901650 chr22:30901642-30901652
49	E2F6	chr22:30901134-30902063	H1-hESC	embryonic stem cell:	n/a	chr22:30901235-30901245 chr22:30901641-30901650 chr22:30901642-30901652
50	EGR1	chr22:30902733-30902951	K562	blood:	n/a	chr22:30902843-30902856 chr22:30902842-30902857

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr22:30901647-30901697	ovcar-3	ovarian:	n/a
2	chr22:30901647-30901697	ovcar-3	ovarian:	n/a
3	chr22:30898256-30898306	HRCEpiC	kidney:	n/a
4	chr22:30901876-30901926	AG04450	lung:	fetal
5	chr22:30902642-30902692	PrEC	prostate:	n/a
6	chr22:30898256-30898306	AG04449	skin:	fetal
7	chr22:30902642-30902692	GM12891	blood:	n/a
8	chr22:30901647-30901697	AG09309	skin:	n/a
9	chr22:30901532-30901582	HNPCEpiC	eye:	n/a
10	chr22:30898256-30898306	NH-A	brain:	n/a
11	chr22:30901707-30901757	NH-A	brain:	n/a
12	chr22:30901780-30901830	RPTEC	kidney:	n/a
13	chr22:30901876-30901926	H1-hESC	embryonic stem cell:	embryo
14	chr22:30901876-30901926	SK-N-SH_RA	brain:	n/a
15	chr22:30901780-30901830	H1-hESC	embryonic stem cell:	embryo
16	chr22:30901647-30901697	HepG2	liver:	n/a
17	chr22:30901647-30901697	Caco-2	colon:	n/a
18	chr22:30901640-30901690	HNPCEpiC	eye:	n/a
19	chr22:30901640-30901690	GM12891	blood:	n/a
20	chr22:30901886-30901936	AG04450	lung:	fetal
21	chr22:30901532-30901582	PrEC	prostate:	n/a
22	chr22:30901249-30901299	GM19239	blood:	n/a
23	chr22:30901532-30901582	SKMC	muscle:	n/a
24	chr22:30899870-30899920	T-47D	breast:	n/a
25	chr22:30902615-30902665	AG04449	skin:	fetal
26	chr22:30901647-30901697	T-47D	breast:	n/a
27	chr22:30901647-30901697	HRE	kidney:	n/a
28	chr22:30901640-30901690	GM12878	blood:	n/a
29	chr22:30899870-30899920	Caco-2	colon:	n/a
30	chr22:30901249-30901299	RPTEC	kidney:	n/a
31	chr22:30902642-30902692	NT2-D1	testis:	n/a
32	chr22:30901780-30901830	AG04450	lung:	fetal
33	chr22:30901886-30901936	U87	brain:	n/a
34	chr22:30901249-30901299	ECC-1	luminal epithelium:	n/a
35	chr22:30901249-30901299	U87	brain:	n/a
36	chr22:30901876-30901926	Caco-2	colon:	n/a
37	chr22:30901886-30901936	NHDF-neo	bronchial:	n/a
38	chr22:30901780-30901830	ProgFib	skin:	n/a
39	chr22:30898256-30898306	PANC-1	pancreas:	n/a
40	chr22:30901886-30901936	HL-60	blood:	n/a
41	chr22:30901532-30901582	NH-A	brain:	n/a
42	chr22:30901886-30901936	MCF10A-Er-Src	breast:	n/a
43	chr22:30898256-30898306	AoSMC	blood vessel:	n/a
44	chr22:30902615-30902665	AG10803	skin:	n/a
45	chr22:30898256-30898306	T-47D	breast:	n/a
46	chr22:30901647-30901697	HRPEpiC	eye:	n/a
47	chr22:30901532-30901582	NHDF-neo	bronchial:	n/a
48	chr22:30902642-30902692	RPTEC	kidney:	n/a
49	chr22:30902642-30902692	SAEC	small airway:	n/a
50	chr22:30902642-30902692	NH-A	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr22:30909996..30912049-chr22:30918032..30920437,2	K562	blood:
2	chr22:30820081..30823077-chr22:30890155..30892931,2	MCF-7	breast:
3	chr22:30906993..30909808-chr22:30916517..30918667,2	K562	blood:
4	chr22:30868050..30870470-chr22:30889261..30891907,2	K562	blood:
5	chr22:30909996..30912049-chr22:30918032..30920437,2	K562	blood:
6	chr22:30888262..30890131-chr22:30891549..30894001,2	K562	blood:
7	chr22:30902781..30904363-chr22:30927760..30929353,2	K562	blood:
8	chr22:30884994..30887609-chr22:30891940..30894368,2	K562	blood:
9	chr22:30901184..30902907-chr22:30919410..30920993,2	MCF-7	breast:
10	chr22:30888262..30890131-chr22:30891549..30894001,2	K562	blood:
11	chr22:30906993..30909808-chr22:30916517..30918667,2	K562	blood:
12	chr22:30839710..30841304-chr22:30897619..30899951,2	K562	blood:
13	chr22:30820356..30823347-chr22:30905051..30906712,2	MCF-7	breast:
14	chr22:30898269..30900043-chr22:30984977..30987505,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MTFP1-2	chr22:30888426-30888755	ENSG00000181123.4
2	lnc-MTFP1-2	chr22:30888426-30888791	ENSG00000181123.3

Variant related genes	Relation type
SEC14L4	TF binding region
SEC14L4	CpG island
ENSG00000242114	chromatin interactions
ENSG00000133488	chromatin interactions

Extended variants
information (count: 1366 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:1366 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs145343277	chr22:30888114-30888115	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs373032648	chr22:30888133-30888134	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs371962449	chr22:30888159-30888160	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs556598480	chr22:30888165-30888166	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs117676448	chr22:30888206-30888207	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs117159421	chr22:30888234-30888235	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs570230754	chr22:30888241-30888242	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs140398681	chr22:30888297-30888298	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs117606056	chr22:30888329-30888330	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs539974022	chr22:30888330-30888331	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs368109803	chr22:30888338-30888339	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs146781142	chr22:30888341-30888342	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs573776883	chr22:30888372-30888373	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs371686236	chr22:30888376-30888377	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs140549169	chr22:30888379-30888380	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs562648310	chr22:30888380-30888381	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs5997665	chr22:30888412-30888413	Weak transcription Enhancers Bivalent Enhancer Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs200234273	chr22:30888452-30888453	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
19	rs373104870	chr22:30888454-30888455	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
20	rs199777878	chr22:30888484-30888485	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
21	rs199853485	chr22:30888485-30888486	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
22	rs376318758	chr22:30888487-30888488	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
23	rs144991281	chr22:30888491-30888492	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
24	rs61744139	chr22:30888492-30888493	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs17738527	chr22:30888494-30888495	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs138852663	chr22:30888498-30888499	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
27	rs80195879	chr22:30888504-30888505	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
28	rs145618105	chr22:30888505-30888506	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
29	rs17738540	chr22:30888527-30888528	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs201915950	chr22:30888528-30888529	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
31	rs541243164	chr22:30888576-30888577	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
32	rs372456460	chr22:30888578-30888579	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
33	rs56037418	chr22:30888589-30888590	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs73392181	chr22:30888600-30888601	Weak transcription Enhancers Bivalent Enhancer Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs557318117	chr22:30888653-30888654	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
36	rs577246241	chr22:30888855-30888856	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs533614877	chr22:30888877-30888878	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs553466753	chr22:30888899-30888900	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs184660054	chr22:30888900-30888901	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs148118898	chr22:30888941-30888942	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs8137718	chr22:30888959-30888960	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs369102163	chr22:30888963-30888964	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs141016981	chr22:30888974-30888975	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs190287120	chr22:30889027-30889028	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs569036129	chr22:30889071-30889072	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs10593638	chr22:30889087-30889088	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs565254461	chr22:30889114-30889115	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs8137267	chr22:30889139-30889140	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs547874985	chr22:30889173-30889174	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs150246953	chr22:30889211-30889212	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Velocardiofacial syndrome	20111667	CNVD
Medulloblastoma	21979893	CNVD
sporadic solitary meningiomas	19589153	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Congenital heart defect	22511896	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Seminomas	18059402	CNVD
Cancer	16751803	CNVD
Metanephric adenoma	20802469	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Metachromatic leukodystrophy	18421352	CNVD
Basal cell lymphoma	17170743	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Breast cancer	21858162	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	16608533	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	22174824	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Wilms tumour	21544195	CNVD
Acute myeloid leukemia	21251322	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Lung cancer	18438408	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
small cell lung cancer	20016488	CNVD
Cancer	21183584	CNVD
Renal cell carcinoma	18765545	CNVD
Schizophrenia	19521646	CNVD
Schizophrenia	18990708	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Hepatocellular carcinoma	16750200	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	17322880	CNVD
Breast cancer	20409316	CNVD
Neurofibromatosis type 2	19566914	CNVD
Autism	19384346	CNVD
Myelofibrosis	22110671	CNVD
muscular dystrophy type 1D	21248746	CNVD
Leukoplakia	24403051	CNVD
Ovarian neoplasms	16753589	CNVD
Autism	22495309	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:148 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:30874600-30894000	Weak transcription	Right Atrium	heart
2	chr22:30881800-30890000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr22:30882000-30888400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr22:30882000-30889400	Weak transcription	Spleen	Spleen
5	chr22:30883400-30901200	Weak transcription	A549	lung
6	chr22:30884800-30891200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr22:30886400-30893600	Weak transcription	Lung	lung
8	chr22:30886600-30892000	Strong transcription	Liver	Liver
9	chr22:30888400-30888600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr22:30888400-30888600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr22:30890000-30890200	Enhancers	H9 Cell Line	embryonic stem cell
12	chr22:30891200-30891800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr22:30891400-30891800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr22:30891600-30891800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr22:30891800-30892000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr22:30891800-30901200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr22:30892000-30892600	Weak transcription	Liver	Liver
18	chr22:30892600-30895200	Enhancers	Liver	Liver
19	chr22:30893000-30893600	Bivalent Enhancer	HepG2	liver
20	chr22:30893600-30893800	Active TSS	Lung	lung
21	chr22:30893600-30894000	Enhancers	HepG2	liver
22	chr22:30894000-30898200	Weak transcription	HepG2	liver
23	chr22:30895200-30895600	Weak transcription	Liver	Liver
24	chr22:30895600-30895800	Enhancers	Liver	Liver
25	chr22:30895800-30898200	Weak transcription	Liver	Liver
26	chr22:30898200-30900200	Enhancers	Liver	Liver
27	chr22:30898200-30903600	Enhancers	HepG2	liver
28	chr22:30900200-30901000	Flanking Active TSS	Liver	Liver
29	chr22:30900200-30902000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr22:30900600-30900800	Bivalent Enhancer	Brain Hippocampus Middle	brain
31	chr22:30900600-30900800	Bivalent Enhancer	Brain Inferior Temporal Lobe	brain
32	chr22:30900600-30901200	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr22:30900600-30902000	Active TSS	Hela-S3	cervix
34	chr22:30901000-30901200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr22:30901000-30901200	Enhancers	Gastric	stomach
36	chr22:30901000-30901200	Enhancers	HMEC	breast
37	chr22:30901000-30901400	Active TSS	Liver	Liver
38	chr22:30901200-30901400	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr22:30901200-30901400	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
40	chr22:30901200-30901400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
41	chr22:30901200-30901400	Flanking Bivalent TSS/Enh	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr22:30901200-30901400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr22:30901200-30901400	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr22:30901200-30901400	Bivalent Enhancer	Primary mononuclear cells fromperipheralblood	Blood
45	chr22:30901200-30901400	Flanking Bivalent TSS/Enh	Duodenum Mucosa	Duodenum
46	chr22:30901200-30901400	Bivalent Enhancer	Fetal Intestine Large	intestine
47	chr22:30901200-30901400	Flanking Active TSS	Lung	lung
48	chr22:30901200-30901400	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
49	chr22:30901200-30901400	Bivalent Enhancer	Stomach Mucosa	stomach
50	chr22:30901200-30901600	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links