No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs185810457 |
chr1:97188003-97188004 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs368403832 |
chr1:97188011-97188012 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs566656101 |
chr1:97188049-97188050 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs191359054 |
chr1:97188082-97188083 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs375895314 |
chr1:97188097-97188098 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs371079943 |
chr1:97188098-97188099 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs372140226 |
chr1:97188122-97188123 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs561637320 |
chr1:97188166-97188167 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs568638566 |
chr1:97188213-97188214 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs537422143 |
chr1:97188308-97188309 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs557348477 |
chr1:97188358-97188359 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs578158673 |
chr1:97188376-97188377 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs7552545 |
chr1:97188394-97188395 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
14 |
rs543821155 |
chr1:97188422-97188423 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs182761756 |
chr1:97188447-97188448 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs563501462 |
chr1:97188456-97188457 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs111233830 |
chr1:97188484-97188485 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs78093879 |
chr1:97188495-97188496 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs7531045 |
chr1:97188559-97188560 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
20 |
rs546779971 |
chr1:97188588-97188589 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs112795189 |
chr1:97188599-97188600 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs565282768 |
chr1:97188621-97188622 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs559635759 |
chr1:97188675-97188676 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs372816437 |
chr1:97188713-97188714 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs367996059 |
chr1:97188773-97188774 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs527728218 |
chr1:97188778-97188779 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs75019551 |
chr1:97188783-97188784 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs566687543 |
chr1:97188805-97188806 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs529030750 |
chr1:97188808-97188809 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs548788509 |
chr1:97188856-97188857 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs528288453 |
chr1:97188890-97188891 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs568579753 |
chr1:97188945-97188946 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs553569838 |
chr1:97188986-97188987 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs148386635 |
chr1:97189006-97189007 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs142226500 |
chr1:97189007-97189008 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs571221800 |
chr1:97189019-97189020 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs533594922 |
chr1:97189020-97189021 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs554433762 |
chr1:97189065-97189066 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs187691653 |
chr1:97189075-97189076 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs3762411 |
chr1:97189091-97189092 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs373728182 |
chr1:97189126-97189127 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs201223963 |
chr1:97189154-97189155 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs568363561 |
chr1:97189163-97189164 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs370809577 |
chr1:97189164-97189165 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs202229496 |
chr1:97189172-97189173 |
Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs535866203 |
chr1:97189217-97189218 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs545513184 |
chr1:97189219-97189220 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs193109791 |
chr1:97189236-97189237 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs572388144 |
chr1:97189240-97189241 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs111625719 |
chr1:97189260-97189261 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|