Variant report

Variant esv3416199
Chromosome Location chr1:152957887-153005113
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:152954200-152966200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:152954400-152969200 Weak transcription Pancreas Pancrea
3 chr1:152956800-152965600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:152956800-152972200 Weak transcription HMEC breast
5 chr1:152957200-152958400 Active TSS Esophagus oesophagus
6 chr1:152965400-152965800 Enhancers Fetal Brain Male brain
7 chr1:152965600-152966000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:152965800-152969200 Weak transcription Fetal Brain Male brain
9 chr1:152966000-152972200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:152968800-152969800 Enhancers HUES48 Cell Line embryonic stem cell
11 chr1:152969000-152969200 Enhancers Brain Anterior Caudate brain
12 chr1:152969000-152969200 Enhancers Brain Hippocampus Middle brain
13 chr1:152969000-152969200 Enhancers Brain Inferior Temporal Lobe brain
14 chr1:152969000-152969200 Enhancers Brain Substantia Nigra brain
15 chr1:152969000-152969400 Enhancers Esophagus oesophagus
16 chr1:152969000-152969600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:152969000-152969600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:152969000-152969600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:152969000-152969600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:152969000-152970000 Enhancers Brain Angular Gyrus brain
21 chr1:152969000-152970600 Enhancers Ovary ovary
22 chr1:152969200-152969400 Flanking Active TSS Brain Substantia Nigra brain
23 chr1:152969200-152969600 Enhancers H1 Cell Line embryonic stem cell
24 chr1:152969200-152969600 Flanking Active TSS Brain Hippocampus Middle brain
25 chr1:152969200-152969600 Enhancers Pancreas Pancrea
26 chr1:152969200-152969800 Enhancers HUES6 Cell Line embryonic stem cell
27 chr1:152969200-152969800 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr1:152969200-152969800 Flanking Active TSS Brain Anterior Caudate brain
29 chr1:152969200-152969800 Flanking Active TSS Brain Inferior Temporal Lobe brain
30 chr1:152969200-152970000 Enhancers Brain Cingulate Gyrus brain
31 chr1:152969200-152971000 Enhancers Fetal Brain Male brain
32 chr1:152969400-152970200 Enhancers Brain Substantia Nigra brain
33 chr1:152969400-152972000 Weak transcription Esophagus oesophagus
34 chr1:152969600-152969800 Enhancers Brain Hippocampus Middle brain
35 chr1:152969600-152970000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:152969600-152970600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:152969600-152972000 Weak transcription Pancreas Pancrea
38 chr1:152969600-152972600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr1:152969800-152970200 Weak transcription Brain Hippocampus Middle brain
40 chr1:152969800-152970600 Enhancers Brain Anterior Caudate brain
41 chr1:152969800-152970600 Enhancers Brain Inferior Temporal Lobe brain
42 chr1:152970200-152970400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:152970200-152970400 Flanking Active TSS Brain Substantia Nigra brain
44 chr1:152970200-152970600 Enhancers Brain Hippocampus Middle brain
45 chr1:152970400-152970600 Enhancers Brain Substantia Nigra brain
46 chr1:152970600-152974800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:152970600-152975600 Enhancers Placenta Amnion Placenta Amnion
48 chr1:152972000-152972200 Enhancers Pancreas Pancrea
49 chr1:152972000-152972400 Active TSS Esophagus oesophagus
50 chr1:152972200-152973200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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