Variant report

Variant esv3419326
Chromosome Location chr2:234498411-234560470
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234499000-234499400 Bivalent Enhancer HepG2 liver
2 chr2:234500600-234501200 ZNF genes & repeats GM12878-XiMat blood
3 chr2:234500600-234502200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr2:234501200-234501600 Weak transcription GM12878-XiMat blood
5 chr2:234501600-234502000 Enhancers HMEC breast
6 chr2:234501600-234502200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:234501600-234502200 Flanking Active TSS GM12878-XiMat blood
8 chr2:234501600-234502600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr2:234502000-234502600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:234502200-234503000 Enhancers GM12878-XiMat blood
11 chr2:234502600-234502800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:234505600-234506200 Enhancers Esophagus oesophagus
13 chr2:234505600-234507800 Enhancers Fetal Kidney kidney
14 chr2:234505800-234507200 Enhancers Rectal Mucosa Donor 31 rectum
15 chr2:234506000-234506800 Enhancers Rectal Mucosa Donor 29 rectum
16 chr2:234506200-234507000 Enhancers A549 lung
17 chr2:234506400-234507200 Enhancers Colon Smooth Muscle Colon
18 chr2:234506400-234508000 Enhancers Liver Liver
19 chr2:234506600-234507000 Enhancers Placenta Amnion Placenta Amnion
20 chr2:234507000-234507800 Flanking Active TSS A549 lung
21 chr2:234507800-234508000 Enhancers A549 lung
22 chr2:234508000-234511000 Weak transcription Liver Liver
23 chr2:234509000-234509400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:234509000-234509400 Enhancers NHEK skin
25 chr2:234509400-234510800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:234511000-234511200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:234511000-234514200 Enhancers Liver Liver
28 chr2:234512000-234512800 Enhancers HepG2 liver
29 chr2:234514200-234516600 Weak transcription Liver Liver
30 chr2:234516600-234518200 Enhancers Liver Liver
31 chr2:234525600-234528200 Active TSS Rectal Mucosa Donor 29 rectum
32 chr2:234525800-234526000 Enhancers Duodenum Mucosa Duodenum
33 chr2:234525800-234526200 Enhancers Rectal Mucosa Donor 31 rectum
34 chr2:234525800-234526400 Enhancers NHEK skin
35 chr2:234526000-234526600 Flanking Active TSS Duodenum Mucosa Duodenum
36 chr2:234526200-234526600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
37 chr2:234526600-234526800 Enhancers Duodenum Mucosa Duodenum
38 chr2:234526600-234526800 Active TSS Rectal Mucosa Donor 31 rectum
39 chr2:234526800-234528800 Weak transcription Duodenum Mucosa Duodenum
40 chr2:234526800-234528800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr2:234528800-234529000 Enhancers Duodenum Mucosa Duodenum
42 chr2:234528800-234529600 Enhancers Rectal Mucosa Donor 31 rectum
43 chr2:234537800-234538000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
44 chr2:234538000-234544600 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr2:234544400-234545200 Enhancers Rectal Mucosa Donor 31 rectum
46 chr2:234544600-234544800 Enhancers Duodenum Mucosa Duodenum
47 chr2:234544600-234544800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
48 chr2:234544600-234545000 Enhancers Colonic Mucosa Colon
49 chr2:234544800-234547600 Active TSS Duodenum Mucosa Duodenum
50 chr2:234544800-234548400 Active TSS Rectal Mucosa Donor 29 rectum

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