No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs541272496 |
chr2:37551399-37551400 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs373505984 |
chr2:37551402-37551403 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs7573871 |
chr2:37551414-37551415 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
4 |
rs558439891 |
chr2:37551426-37551427 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs182123528 |
chr2:37551439-37551440 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs563958118 |
chr2:37551445-37551446 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs530946245 |
chr2:37551499-37551500 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs542981367 |
chr2:37551518-37551519 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs561230565 |
chr2:37551616-37551617 |
Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs10202288 |
chr2:37551665-37551666 |
Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs546769474 |
chr2:37551738-37551739 |
Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs551995756 |
chr2:37551758-37551759 |
Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs79931255 |
chr2:37551776-37551777 |
Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs565566291 |
chr2:37551981-37551982 |
Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs532945297 |
chr2:37552014-37552015 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs112750723 |
chr2:37552036-37552037 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs569584266 |
chr2:37552061-37552062 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs377471250 |
chr2:37552116-37552117 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs555301403 |
chr2:37552150-37552151 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs567140241 |
chr2:37552210-37552211 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs553098266 |
chr2:37552221-37552222 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs534759860 |
chr2:37552231-37552232 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs553085261 |
chr2:37552277-37552278 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs578234017 |
chr2:37552323-37552324 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs545585182 |
chr2:37552350-37552351 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs557709984 |
chr2:37552356-37552357 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs575849253 |
chr2:37552389-37552390 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs574531269 |
chr2:37552402-37552403 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs542665209 |
chr2:37552408-37552409 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs561375182 |
chr2:37552429-37552430 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs112068596 |
chr2:37552443-37552444 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs540361852 |
chr2:37552445-37552446 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs75341365 |
chr2:37552446-37552447 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|