Variant report

Variant	esv3420117
Chromosome Location	chr15:93423948-93428546
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:939)
CpG islands
(count:368)
Chromatin interactive
region (count:52)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:939 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:93424936-93426085	K562	blood:	n/a	n/a
2	ARID3A	chr15:93424427-93424727	K562	blood:	n/a	n/a
3	ARID3A	chr15:93424998-93426138	HepG2	liver:	n/a	n/a
4	ARID3A	chr15:93426880-93427238	HepG2	liver:	n/a	n/a
5	ARID3A	chr15:93426945-93428834	K562	blood:	n/a	n/a
6	ATF1	chr15:93426949-93427230	K562	blood:	n/a	n/a
7	ATF1	chr15:93425181-93426122	K562	blood:	n/a	n/a
8	ATF2	chr15:93425342-93425780	GM12878	blood:	n/a	n/a
9	ATF2	chr15:93425195-93425815	GM12878	blood:	n/a	n/a
10	ATF2	chr15:93425235-93425885	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr15:93426743-93427391	GM12878	blood:	n/a	n/a
12	ATF3	chr15:93425888-93426377	A549	lung:	n/a	n/a
13	BACH1	chr15:93425130-93425624	K562	blood:	n/a	n/a
14	BCL3	chr15:93425831-93426259	GM12878	blood:	n/a	chr15:93426000-93426013 chr15:93425998-93426007 chr15:93426184-93426197
15	BCL3	chr15:93424683-93426269	A549	lung:	n/a	chr15:93426000-93426013 chr15:93425998-93426007 chr15:93426184-93426197 chr15:93424764-93424773
16	BCL3	chr15:93424747-93425837	A549	lung:	n/a	chr15:93424764-93424773
17	BCLAF1	chr15:93425765-93426319	GM12878	blood:	n/a	chr15:93426000-93426013 chr15:93425998-93426007 chr15:93426184-93426197
18	BCLAF1	chr15:93426815-93427380	GM12878	blood:	n/a	n/a
19	BCLAF1	chr15:93424888-93425692	GM12878	blood:	n/a	n/a
20	BCLAF1	chr15:93425759-93426324	K562	blood:	n/a	chr15:93426000-93426013 chr15:93425998-93426007 chr15:93426184-93426197
21	BHLHE40	chr15:93425060-93426209	HepG2	liver:	n/a	n/a
22	BHLHE40	chr15:93424757-93424778	K562	blood:	n/a	n/a
23	BHLHE40	chr15:93425100-93426159	K562	blood:	n/a	n/a
24	BHLHE40	chr15:93425161-93426221	GM12878	blood:	n/a	n/a
25	BRCA1	chr15:93425933-93426118	GM12878	blood:	n/a	n/a
26	BRCA1	chr15:93426636-93427818	Hela-S3	cervix:	n/a	n/a
27	BRCA1	chr15:93425119-93426148	HepG2	liver:	n/a	n/a
28	BRCA1	chr15:93425327-93426146	Hela-S3	cervix:	n/a	n/a
29	CBX3	chr15:93424770-93425699	K562	blood:	n/a	n/a
30	CBX3	chr15:93425849-93426216	K562	blood:	n/a	n/a
31	CCNT2	chr15:93428447-93428995	K562	blood:	n/a	n/a
32	CCNT2	chr15:93425167-93426794	K562	blood:	n/a	chr15:93426614-93426623
33	CEBPB	chr15:93425088-93425794	H1-hESC	embryonic stem cell:	n/a	chr15:93425620-93425628
34	CEBPB	chr15:93424898-93425880	K562	blood:	n/a	chr15:93425620-93425628
35	CEBPB	chr15:93425042-93426126	A549	lung:	n/a	chr15:93425620-93425628
36	CEBPB	chr15:93427725-93428840	K562	blood:	n/a	chr15:93428047-93428060 chr15:93428047-93428058
37	CEBPB	chr15:93425198-93425853	HepG2	liver:	n/a	chr15:93425620-93425628
38	CEBPB	chr15:93425144-93425889	K562	blood:	n/a	chr15:93425620-93425628
39	CEBPB	chr15:93428440-93428702	A549	lung:	n/a	n/a
40	CEBPB	chr15:93428398-93428823	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr15:93425184-93426167	Hela-S3	cervix:	n/a	chr15:93425620-93425628
42	CEBPB	chr15:93426795-93427924	Hela-S3	cervix:	n/a	n/a
43	CEBPD	chr15:93425902-93426218	HepG2	liver:	n/a	n/a
44	CEBPD	chr15:93425781-93426269	K562	blood:	n/a	n/a
45	CEBPD	chr15:93424981-93425746	K562	blood:	n/a	n/a
46	CEBPD	chr15:93425799-93426239	K562	blood:	n/a	n/a
47	CEBPD	chr15:93425392-93426293	HepG2	liver:	n/a	n/a
48	CEBPZ	chr15:93425007-93425858	HepG2	liver:	n/a	n/a
49	CHD1	chr15:93424992-93425681	H1-hESC	embryonic stem cell:	n/a	n/a
50	CHD1	chr15:93425092-93429680	GM12878	blood:	n/a	chr15:93426483-93426493 chr15:93426003-93426013

(count:368 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:93426002-93426052	U87	brain:	n/a
2	chr15:93427738-93427788	IMR90	lung:	fetal
3	chr15:93426002-93426052	U87	brain:	n/a
4	chr15:93427738-93427788	IMR90	lung:	fetal
5	chr15:93424933-93424983	HPAEpiC	pulmonary alveolar:	n/a
6	chr15:93427738-93427788	HRE	kidney:	n/a
7	chr15:93424933-93424983	MCF10A-Er-Src	breast:	n/a
8	chr15:93427738-93427788	MCF-7	breast:	n/a
9	chr15:93424933-93424983	GM12891	blood:	n/a
10	chr15:93427738-93427788	CMK	blood:	n/a
11	chr15:93426002-93426052	Hepatocyte	liver:	n/a
12	chr15:93425855-93425905	CMK	blood:	n/a
13	chr15:93424933-93424983	ProgFib	skin:	n/a
14	chr15:93427738-93427788	ProgFib	skin:	n/a
15	chr15:93425855-93425905	GM19239	blood:	n/a
16	chr15:93426002-93426052	HRE	kidney:	n/a
17	chr15:93426002-93426052	HMEC	breast:	n/a
18	chr15:93424933-93424983	HL-60	blood:	n/a
19	chr15:93425245-93425295	SK-N-MC	brain:	n/a
20	chr15:93426637-93426687	K562	blood:	n/a
21	chr15:93425855-93425905	HRE	kidney:	n/a
22	chr15:93427738-93427788	NHBE	bronchial:	n/a
23	chr15:93426002-93426052	ProgFib	skin:	n/a
24	chr15:93426002-93426052	RPTEC	kidney:	n/a
25	chr15:93427738-93427788	BJ	skin:	n/a
26	chr15:93426637-93426687	IMR90	lung:	fetal
27	chr15:93425855-93425905	HMEC	breast:	n/a
28	chr15:93426637-93426687	GM12892	blood:	n/a
29	chr15:93426637-93426687	SAEC	small airway:	n/a
30	chr15:93427738-93427788	RPTEC	kidney:	n/a
31	chr15:93426637-93426687	GM12878	blood:	n/a
32	chr15:93424933-93424983	LNCaP	prostate:	n/a
33	chr15:93427738-93427788	SK-N-SH	brain:	n/a
34	chr15:93426002-93426052	HepG2	liver:	n/a
35	chr15:93427738-93427788	GM19239	blood:	n/a
36	chr15:93425855-93425905	HCPEpiC	choroid plexus:	n/a
37	chr15:93425245-93425295	MCF10A-Er-Src	breast:	n/a
38	chr15:93426637-93426687	HAEpiC	amniotic membrane:	n/a
39	chr15:93426002-93426052	SK-N-SH	brain:	n/a
40	chr15:93425245-93425295	AG04450	lung:	fetal
41	chr15:93425245-93425295	HepG2	liver:	n/a
42	chr15:93425245-93425295	NHBE	bronchial:	n/a
43	chr15:93424933-93424983	MCF-7	breast:	n/a
44	chr15:93425245-93425295	HCPEpiC	choroid plexus:	n/a
45	chr15:93425855-93425905	LNCaP	prostate:	n/a
46	chr15:93426637-93426687	HEEpiC	esophagus:	n/a
47	chr15:93425245-93425295	BJ	skin:	n/a
48	chr15:93425245-93425295	HAEpiC	amniotic membrane:	n/a
49	chr15:93426002-93426052	K562	blood:	n/a
50	chr15:93424933-93424983	IMR90	lung:	fetal

(count:52 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr12:46766505..46767057-chr15:93426546..93427455,2	Hela-S3	cervix:
2	chr15:93425672..93426403-chr2:96931759..96932498,2	Hela-S3	cervix:
3	chr11:62607333..62609223-chr15:93424710..93426737,2	K562	blood:
4	chr1:186648896..186649559-chr15:93425048..93425747,2	Hela-S3	cervix:
5	chr15:93425919..93426466-chr17:48943152..48944136,2	HCT-116	colon:
6	chr15:93425219..93426130-chr7:99613026..99613921,3	Hela-S3	cervix:
7	chr15:93352634..93353153-chr15:93426164..93426733,2	Hela-S3	cervix:
8	chr15:93339450..93342002-chr15:93423524..93425580,2	MCF-7	breast:
9	chr15:93425116..93426959-chr6:26041379..26043913,2	MCF-7	breast:
10	chr1:200638243..200638833-chr15:93425999..93426748,2	Hela-S3	cervix:
11	chr15:59040871..59041490-chr15:93425219..93425886,2	Hela-S3	cervix:
12	chr15:93425600..93426427-chr8:128747188..128747893,2	Hela-S3	cervix:
13	chr12:122240075..122242240-chr15:93426091..93428308,2	K562	blood:
14	chr15:93426546..93427161-chr9:132257403..132257942,2	Hela-S3	cervix:
15	chr15:93197537..93199243-chr15:93427702..93429402,2	MCF-7	breast:
16	chr15:93333327..93367027-chr15:93419774..93462750,363	K562	blood:
17	chr1:101491188..101491749-chr15:93426290..93427209,2	Hela-S3	cervix:
18	chr15:93344712..93371031-chr15:93418700..93467618,365	MCF-7	breast:
19	chr15:93425070..93425680-chr9:33264389..33265229,2	HCT-116	colon:
20	chr11:8703694..8704591-chr15:93426286..93427015,2	Hela-S3	cervix:
21	chr14:24740252..24740952-chr15:93425313..93426012,2	Hela-S3	cervix:
22	chr15:93425765..93426393-chr8:145581684..145582273,2	HCT-116	colon:
23	chr15:93424784..93426792-chr15:93481094..93482707,2	MCF-7	breast:
24	chr15:93425618..93426327-chr5:44808930..44809610,2	Hela-S3	cervix:
25	chr15:93422990..93425055-chr15:93476703..93479164,2	K562	blood:
26	chr15:93425198..93426173-chr6:74230195..74230813,2	Hela-S3	cervix:
27	chr11:118991887..118992547-chr15:93425189..93426017,2	NB4	blood:
28	chr15:93425880..93426448-chr22:19419287..19419861,2	Hela-S3	cervix:
29	chr15:69743883..69746535-chr15:93425105..93427133,2	MCF-7	breast:
30	chr11:61559605..61560105-chr15:93425741..93426488,2	Hela-S3	cervix:
31	chr1:43282650..43283493-chr15:93425433..93425937,2	Hela-S3	cervix:
32	chr15:93352108..93352936-chr15:93425171..93425678,2	K562	blood:
33	chr1:161102076..161102885-chr15:93425741..93426245,2	Hela-S3	cervix:
34	chr15:93337836..93370220-chr15:93420085..93452591,332	K562	blood:
35	chr15:93425715..93426614-chr15:93442901..93444013,3	MCF-7	breast:
36	chr15:93352456..93353356-chr15:93428226..93429092,2	MCF-7	breast:
37	chr15:93181102..93183442-chr15:93428358..93430400,2	MCF-7	breast:
38	chr15:93424876..93427339-chr17:58154118..58156433,2	MCF-7	breast:
39	chr15:93352256..93353063-chr15:93425255..93425934,3	Hela-S3	cervix:
40	chr15:93426014..93426615-chr8:146126495..146127404,2	Hela-S3	cervix:
41	chr15:93425560..93426485-chr17:56736090..56737008,2	Hela-S3	cervix:
42	chr15:93385510..93388463-chr15:93423179..93425134,2	K562	blood:
43	chr15:93352208..93354404-chr15:93425621..93426740,6	MCF-7	breast:
44	chr12:57082176..57083030-chr15:93425152..93425714,2	Hela-S3	cervix:
45	chr15:93425841..93426770-chr20:23617945..23618689,2	Hela-S3	cervix:
46	chr11:18548153..18548751-chr15:93425186..93425734,2	Hela-S3	cervix:
47	chr15:93426839..93427818-chr9:96213584..96214428,2	Hela-S3	cervix:
48	chr15:93412399..93413366-chr15:93424771..93425883,5	MCF-7	breast:
49	chr15:93426015..93426748-chr2:85766185..85766857,2	Hela-S3	cervix:
50	chr15:93352604..93353121-chr15:93427828..93428651,2	Hela-S3	cervix:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHD2-6	chr15:93426815-93427010	NONHSAT049673
2	lnc-CHD2-6	chr15:93426815-93426849	ENSG00000272888.1
3	lnc-CHD2-6	chr15:93427601-93428814	ENSG00000272888.1
4	lnc-CHD2-6	chr15:93426974-93427008	ENSG00000272888.1
5	lnc-CHD2-6	chr15:93426104-93426416	ENSG00000272888.1
6	lnc-CHD2-6	chr15:93426815-93427008	ENSG00000272888.1
7	lnc-CHD2-6	chr15:93426092-93426416	ENSG00000272888.1
8	lnc-CHD2-6	chr15:93426118-93426416	ENSG00000272888.1
9	lnc-CHD2-6	chr15:93426815-93427008	ENSG00000272888.1
10	lnc-CHD2-6	chr15:93426526-93426773	NONHSAT049676
11	lnc-CHD2-6	chr15:93426245-93426416	ENSG00000272888.1
12	lnc-CHD2-6	chr15:93426075-93426418	NONHSAT049673

No data

Variant related genes	Relation type
CHD2	TF binding region
ENSG00000272888	TF binding region
CHD2	CpG island
ENSG00000272888	CpG island
ENSG00000133316	chromatin interactions
ENSG00000137845	chromatin interactions
ENSG00000144021	chromatin interactions
ENSG00000258527	chromatin interactions
ENSG00000212694	chromatin interactions
ENSG00000156508	chromatin interactions
ENSG00000185608	chromatin interactions
ENSG00000106261	chromatin interactions
ENSG00000185803	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000136997	chromatin interactions
ENSG00000139725	chromatin interactions
ENSG00000258922	chromatin interactions
ENSG00000196226	chromatin interactions
ENSG00000173575	chromatin interactions
ENSG00000164010	chromatin interactions
ENSG00000101439	chromatin interactions
ENSG00000166441	chromatin interactions
ENSG00000112996	chromatin interactions
ENSG00000139718	chromatin interactions
ENSG00000207601	chromatin interactions
ENSG00000233184	chromatin interactions
ENSG00000117543	chromatin interactions
ENSG00000229980	chromatin interactions
ENSG00000177868	chromatin interactions
ENSG00000196150	chromatin interactions
ENSG00000073756	chromatin interactions
ENSG00000158796	chromatin interactions
ENSG00000048828	chromatin interactions
ENSG00000068097	chromatin interactions
ENSG00000188938	chromatin interactions
ENSG00000141232	chromatin interactions
ENSG00000100949	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000172273	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000185442	chromatin interactions
ENSG00000260088	chromatin interactions
ENSG00000168906	chromatin interactions
ENSG00000074319	chromatin interactions
ENSG00000113593	chromatin interactions
ENSG00000204054	chromatin interactions
ENSG00000137818	chromatin interactions
ENSG00000182325	chromatin interactions
ENSG00000107262	chromatin interactions
ENSG00000086065	chromatin interactions

Extended variants
information (count: 160 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:160 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs548696342	chr15:93423948-93423949	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
2	rs376810701	chr15:93423954-93423955	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
3	rs368898076	chr15:93424000-93424001	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
4	rs149896537	chr15:93424076-93424077	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
5	rs116908257	chr15:93424079-93424080	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
6	rs188080376	chr15:93424130-93424131	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
7	rs544378300	chr15:93424148-93424149	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
8	rs562567734	chr15:93424154-93424155	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
9	rs533489838	chr15:93424167-93424168	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
10	rs550061665	chr15:93424204-93424205	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
11	rs529995070	chr15:93424251-93424252	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs570260801	chr15:93424304-93424305	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs144090508	chr15:93424311-93424312	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs7181755	chr15:93424323-93424324	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs4778053	chr15:93424341-93424342	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs542607481	chr15:93424350-93424351	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs140961536	chr15:93424396-93424397	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs144787895	chr15:93424455-93424456	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs111683556	chr15:93424506-93424507	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs553840397	chr15:93424523-93424524	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs576903858	chr15:93424555-93424556	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
22	rs370604419	chr15:93424597-93424598	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
23	rs192729578	chr15:93424598-93424599	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs556168156	chr15:93424613-93424614	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs576251040	chr15:93424628-93424629	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs140401139	chr15:93424696-93424697	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs143617867	chr15:93424709-93424710	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs571785945	chr15:93424713-93424714	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs148082590	chr15:93424732-93424733	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs141848382	chr15:93424755-93424756	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs564190151	chr15:93424774-93424775	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs35543844	chr15:93424835-93424836	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs533136203	chr15:93424845-93424846	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs150633373	chr15:93424862-93424863	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs115250771	chr15:93424876-93424877	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
36	rs78521495	chr15:93424877-93424878	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
37	rs139143820	chr15:93424890-93424891	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
38	rs6497005	chr15:93424895-93424896	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs149314605	chr15:93424923-93424924	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
40	rs371200770	chr15:93424947-93424948	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
41	rs566251722	chr15:93425079-93425080	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
42	rs533922195	chr15:93425121-93425122	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
43	rs553880920	chr15:93425123-93425124	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
44	rs566368585	chr15:93425132-93425133	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
45	rs570495640	chr15:93425167-93425168	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
46	rs554975390	chr15:93425200-93425201	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
47	rs539454793	chr15:93425302-93425303	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
48	rs185144814	chr15:93425327-93425328	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
49	rs576262601	chr15:93425343-93425344	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
50	rs542068134	chr15:93425372-93425373	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Sudden cardiac death	19188705	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17133270	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Epilepsy	19486360	CNVD
Acute myeloid leukemia	17237825	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Ovarian cancer	21720365	CNVD
Developmental delay	21147756	CNVD
Hepatocellular carcinoma	16750200	CNVD
Central neurocytomas	17123091	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Myelofibrosis	22110671	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD

Chromatin state (count:473 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:93412600-93425000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr15:93413600-93425200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr15:93413800-93425200	Weak transcription	Left Ventricle	heart
4	chr15:93414000-93424200	Weak transcription	Rectal Smooth Muscle	rectum
5	chr15:93419800-93424200	Enhancers	HepG2	liver
6	chr15:93420000-93425200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr15:93420200-93425000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr15:93420200-93425000	Enhancers	Fetal Heart	heart
9	chr15:93420400-93424000	Weak transcription	Hela-S3	cervix
10	chr15:93420400-93425200	Weak transcription	Psoas Muscle	Psoas
11	chr15:93420600-93424200	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr15:93420600-93424600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr15:93420800-93424200	Enhancers	Primary T killer memory cells from peripheral blood	blood
14	chr15:93421000-93424000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr15:93421000-93424800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr15:93421400-93424200	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr15:93421400-93424200	Enhancers	Primary T helper cells PMA-I stimulated	--
18	chr15:93421400-93424400	Enhancers	Primary T cells fromperipheralblood	blood
19	chr15:93421400-93424600	Enhancers	Primary T helper cells fromperipheralblood	blood
20	chr15:93421400-93425200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr15:93421600-93424000	Enhancers	Rectal Mucosa Donor 31	rectum
22	chr15:93421800-93425200	Enhancers	Placenta	Placenta
23	chr15:93421800-93426000	Weak transcription	Ovary	ovary
24	chr15:93422000-93424200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr15:93422000-93425000	Weak transcription	Lung	lung
26	chr15:93422000-93425200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr15:93422200-93424000	Weak transcription	Skeletal Muscle Male	skeletal muscle
28	chr15:93422200-93424400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr15:93422200-93424600	Weak transcription	Stomach Smooth Muscle	stomach
30	chr15:93422200-93425000	Weak transcription	Pancreas	Pancrea
31	chr15:93422200-93425200	Weak transcription	Right Ventricle	heart
32	chr15:93422200-93426000	Weak transcription	Gastric	stomach
33	chr15:93422400-93424000	Weak transcription	Fetal Kidney	kidney
34	chr15:93422400-93424200	Weak transcription	Stomach Mucosa	stomach
35	chr15:93422400-93424400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
36	chr15:93422400-93424600	Weak transcription	Pancreatic Islets	Pancreatic Islet
37	chr15:93422600-93424000	Weak transcription	Fetal Intestine Large	intestine
38	chr15:93422600-93424000	Enhancers	K562	blood
39	chr15:93422800-93424200	Enhancers	Primary hematopoietic stem cells	blood
40	chr15:93422800-93424400	Enhancers	Primary neutrophils fromperipheralblood	blood
41	chr15:93422800-93424400	Enhancers	Primary B cells from cord blood	blood
42	chr15:93422800-93424600	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr15:93422800-93424600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
44	chr15:93422800-93424800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
45	chr15:93423000-93424000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr15:93423000-93424200	Enhancers	A549	lung
47	chr15:93423000-93424400	Enhancers	Breast Myoepithelial Primary Cells	Breast
48	chr15:93423000-93424400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr15:93423000-93424400	Enhancers	Monocytes-CD14+_RO01746	blood
50	chr15:93423000-93424600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood

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