Variant report

Variant	esv3421380
Chromosome Location	chr12:120424669-120428967
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:687)
CpG islands
(count:610)
Chromatin interactive
region (count:23)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:687 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:120426946-120426970	K562	blood:	n/a	n/a
2	ARID3A	chr12:120426272-120426439	K562	blood:	n/a	n/a
3	BACH1	chr12:120426289-120426464	K562	blood:	n/a	n/a
4	BACH1	chr12:120426133-120427103	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr12:120427640-120427818	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr12:120428278-120428463	GM12878	blood:	n/a	n/a
7	BCLAF1	chr12:120426645-120426999	GM12878	blood:	n/a	chr12:120426812-120426825 chr12:120426755-120426768 chr12:120426814-120426827
8	BHLHE40	chr12:120426527-120427257	GM12878	blood:	n/a	chr12:120426819-120426835 chr12:120426595-120426611 chr12:120426812-120426828 chr12:120426992-120427008 chr12:120426807-120426823
9	BHLHE40	chr12:120426388-120427256	K562	blood:	n/a	chr12:120426819-120426835 chr12:120426595-120426611 chr12:120426812-120426828 chr12:120426992-120427008 chr12:120426807-120426823
10	BHLHE40	chr12:120427649-120427835	GM12878	blood:	n/a	n/a
11	BRCA1	chr12:120426757-120426942	Hela-S3	cervix:	n/a	n/a
12	CBX3	chr12:120427610-120427871	K562	blood:	n/a	n/a
13	CCNT2	chr12:120427574-120427848	K562	blood:	n/a	n/a
14	CCNT2	chr12:120426485-120427334	K562	blood:	n/a	chr12:120426959-120426968 chr12:120426571-120426580
15	CEBPB	chr12:120426848-120426936	H1-hESC	embryonic stem cell:	n/a	n/a
16	CEBPB	chr12:120426321-120426993	Hela-S3	cervix:	n/a	n/a
17	CEBPB	chr12:120426536-120426634	K562	blood:	n/a	n/a
18	CHD1	chr12:120427711-120427882	H1-hESC	embryonic stem cell:	n/a	n/a
19	CHD1	chr12:120427699-120427889	GM12878	blood:	n/a	n/a
20	CHD1	chr12:120427197-120427204	H1-hESC	embryonic stem cell:	n/a	n/a
21	CHD1	chr12:120427563-120428019	IMR90	lung:	n/a	n/a
22	CHD2	chr12:120427300-120427421	HepG2	liver:	n/a	n/a
23	CHD2	chr12:120427635-120427848	GM12878	blood:	n/a	n/a
24	CHD2	chr12:120426371-120427841	Hela-S3	cervix:	n/a	chr12:120426960-120426970 chr12:120426965-120426975 chr12:120426992-120427002 chr12:120427435-120427445
25	CHD2	chr12:120426789-120426904	H1-hESC	embryonic stem cell:	n/a	n/a
26	CREB1	chr12:120426488-120427436	A549	lung:	n/a	n/a
27	CREB1	chr12:120427577-120427805	A549	lung:	n/a	n/a
28	CREB1	chr12:120426373-120427938	HepG2	liver:	n/a	n/a
29	CTCF	chr12:120426360-120426510	GM12868	blood:	n/a	n/a
30	CTCF	chr12:120426333-120426552	GM19239	blood:	n/a	n/a
31	CTCF	chr12:120426714-120426922	HepG2	liver:	n/a	n/a
32	CTCF	chr12:120426684-120426923	GM19239	blood:	n/a	n/a
33	CTCF	chr12:120426440-120426590	NB4	blood:	n/a	n/a
34	CTCF	chr12:120426340-120426490	NHDF-neo	bronchial:	n/a	n/a
35	CTCF	chr12:120426360-120426510	GM12870	blood:	n/a	n/a
36	CTCF	chr12:120426708-120426922	MCF-7	breast:	n/a	n/a
37	CTCF	chr12:120426360-120426510	HCT-116	colon:	n/a	n/a
38	CTCF	chr12:120426720-120426870	HMEC	breast:	n/a	n/a
39	CTCF	chr12:120426410-120426564	GM13977	blood:	n/a	n/a
40	CTCF	chr12:120426807-120426904	NHEK	skin:	n/a	n/a
41	CTCF	chr12:120426638-120427039	K562	blood:	n/a	chr12:120427019-120427032
42	CTCF	chr12:120426801-120426877	Pancreas_OC	pancreas:	n/a	n/a
43	CTCF	chr12:120426400-120426550	SAEC	small airway:	n/a	n/a
44	CTCF	chr12:120426840-120426990	SAEC	small airway:	n/a	n/a
45	CTCF	chr12:120426841-120426893	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr12:120426380-120426530	HUVEC	blood vessel:	n/a	n/a
47	CTCF	chr12:120426925-120426929	GM10248	blood:	n/a	n/a
48	CTCF	chr12:120426300-120426450	MCF-7	breast:	n/a	n/a
49	CTCF	chr12:120426315-120426537	GM12891	blood:	n/a	n/a
50	CTCF	chr12:120426339-120426414	HepG2	liver:	n/a	n/a

(count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:120428313-120428363	ProgFib	skin:	n/a
2	chr12:120427178-120427228	K562	blood:	n/a
3	chr12:120426618-120426668	PFSK-1	brain:	n/a
4	chr12:120426529-120426579	HL-60	blood:	n/a
5	chr12:120426784-120426834	T-47D	breast:	n/a
6	chr12:120426784-120426834	HCF	heart:	n/a
7	chr12:120428065-120428115	NHDF-neo	bronchial:	n/a
8	chr12:120427178-120427228	AG09319	gingival:	n/a
9	chr12:120428313-120428363	HIPEpiC	eye:	n/a
10	chr12:120426529-120426579	GM12878	blood:	n/a
11	chr12:120426529-120426579	Caco-2	colon:	n/a
12	chr12:120427182-120427232	NHBE	bronchial:	n/a
13	chr12:120427178-120427228	AoSMC	blood vessel:	n/a
14	chr12:120426529-120426579	SK-N-MC	brain:	n/a
15	chr12:120426784-120426834	AG09309	skin:	n/a
16	chr12:120427667-120427717	HAEpiC	amniotic membrane:	n/a
17	chr12:120426550-120426600	HepG2	liver:	n/a
18	chr12:120428313-120428363	NH-A	brain:	n/a
19	chr12:120427182-120427232	ProgFib	skin:	n/a
20	chr12:120427667-120427717	HL-60	blood:	n/a
21	chr12:120428313-120428363	GM19239	blood:	n/a
22	chr12:120426784-120426834	PANC-1	pancreas:	n/a
23	chr12:120427182-120427232	HCM	heart:	n/a
24	chr12:120426529-120426579	PFSK-1	brain:	n/a
25	chr12:120426784-120426834	LNCaP	prostate:	n/a
26	chr12:120426784-120426834	BJ	skin:	n/a
27	chr12:120426529-120426579	AG09309	skin:	n/a
28	chr12:120426784-120426834	NB4	blood:	n/a
29	chr12:120428313-120428363	RPTEC	kidney:	n/a
30	chr12:120427667-120427717	Hela-S3	cervix:	n/a
31	chr12:120427182-120427232	Hepatocyte	liver:	n/a
32	chr12:120426550-120426600	T-47D	breast:	n/a
33	chr12:120426618-120426668	SK-N-SH	brain:	n/a
34	chr12:120426618-120426668	NH-A	brain:	n/a
35	chr12:120428065-120428115	HEK293	kidney:	embryo
36	chr12:120428028-120428078	GM19239	blood:	n/a
37	chr12:120428028-120428078	Jurkat	blood:	n/a
38	chr12:120426550-120426600	AoSMC	blood vessel:	n/a
39	chr12:120426618-120426668	ECC-1	luminal epithelium:	n/a
40	chr12:120428065-120428115	H1-hESC	embryonic stem cell:	embryo
41	chr12:120427667-120427717	T-47D	breast:	n/a
42	chr12:120426784-120426834	SKMC	muscle:	n/a
43	chr12:120428028-120428078	HMEC	breast:	n/a
44	chr12:120428313-120428363	Hepatocyte	liver:	n/a
45	chr12:120426529-120426579	AoSMC	blood vessel:	n/a
46	chr12:120426550-120426600	PrEC	prostate:	n/a
47	chr12:120428028-120428078	NHBE	bronchial:	n/a
48	chr12:120426529-120426579	Jurkat	blood:	n/a
49	chr12:120428065-120428115	HepG2	liver:	n/a
50	chr12:120426529-120426579	HRE	kidney:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:120426261..120428229-chr12:120638078..120640091,2	MCF-7	breast:
2	chr12:120425735..120427312-chr12:120553344..120556119,2	MCF-7	breast:
3	chr12:120427745..120429727-chr12:120729725..120731576,2	MCF-7	breast:
4	chr12:120424138..120428272-chr12:120728453..120731316,5	K562	blood:
5	chr12:120426002..120427624-chr12:120517341..120518989,2	MCF-7	breast:
6	chr12:120426620..120429059-chr12:120727400..120730169,3	MCF-7	breast:
7	chr12:120425840..120426796-chr20:19097523..19098151,2	MCF-7	breast:
8	chr12:120424652..120426403-chr12:120728776..120730834,2	MCF-7	breast:
9	chr12:120425546..120427435-chr12:120477512..120479258,2	MCF-7	breast:
10	chr12:120425209..120429306-chr12:120552934..120555400,5	MCF-7	breast:
11	chr12:120413777..120415664-chr12:120421623..120425591,4	MCF-7	breast:
12	chr12:120426492..120427432-chr12:120524501..120525382,2	K562	blood:
13	chr12:120426746..120427474-chr12:133338037..133338792,2	HCT-116	colon:
14	chr12:120313729..120318058-chr12:120425281..120428238,3	K562	blood:
15	chr12:120427086..120431307-chr12:120435070..120439124,5	MCF-7	breast:
16	chr12:120428276..120430346-chr12:120637372..120639264,2	MCF-7	breast:
17	chr12:120425404..120428200-chr12:120435927..120438924,2	K562	blood:
18	chr12:120420772..120424084-chr12:120424860..120426963,3	MCF-7	breast:
19	chr12:120425977..120426934-chr12:120517209..120518213,3	MCF-7	breast:
20	chr12:120424699..120427677-chr12:120728453..120732318,6	K562	blood:
21	chr12:120426493..120428297-chr12:120534910..120538709,3	MCF-7	breast:
22	chr12:120426982..120427577-chr19:56825701..56826223,2	Hela-S3	cervix:
23	chr12:120420153..120423656-chr12:120424541..120427660,4	MCF-7	breast:

No data

Variant related genes	Relation type
CCDC64	TF binding region
CCDC64	CpG island
ENSG00000122966	chromatin interactions
ENSG00000267549	chromatin interactions
ENSG00000131848	chromatin interactions
ENSG00000089157	chromatin interactions
ENSG00000202538	chromatin interactions
ENSG00000176915	chromatin interactions
ENSG00000135127	chromatin interactions
ENSG00000111737	chromatin interactions
ENSG00000255857	chromatin interactions
ENSG00000200795	chromatin interactions

Extended variants
information (count: 152 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:152 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs563517738	chr12:120424673-120424674	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs138843994	chr12:120424687-120424688	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs142783141	chr12:120424724-120424725	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs189423505	chr12:120424734-120424735	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs528422385	chr12:120424758-120424759	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs548678277	chr12:120424772-120424773	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs568434666	chr12:120424795-120424796	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs577744639	chr12:120424895-120424896	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs531013406	chr12:120424920-120424921	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs181625324	chr12:120424955-120424956	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs543542913	chr12:120424993-120424994	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs185906578	chr12:120425005-120425006	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs539792805	chr12:120425015-120425016	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs147379175	chr12:120425045-120425046	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs566486470	chr12:120425048-120425049	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs535069307	chr12:120425051-120425052	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs12298267	chr12:120425055-120425056	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs188762079	chr12:120425064-120425065	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs531688337	chr12:120425092-120425093	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs574436118	chr12:120425108-120425109	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs557171058	chr12:120425111-120425112	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs577019010	chr12:120425115-120425116	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs546090456	chr12:120425136-120425137	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs12582361	chr12:120425154-120425155	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs559578082	chr12:120425181-120425182	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs115496815	chr12:120425238-120425239	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs541887225	chr12:120425255-120425256	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs550025990	chr12:120425313-120425314	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs562098999	chr12:120425325-120425326	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs530949048	chr12:120425375-120425376	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs551093129	chr12:120425388-120425389	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs138006673	chr12:120425423-120425424	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs149481845	chr12:120425424-120425425	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs546929730	chr12:120425521-120425522	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs112122250	chr12:120425546-120425547	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs566742459	chr12:120425567-120425568	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs535716409	chr12:120425614-120425615	Bivalent Enhancer Enhancers Active TSS Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs367978297	chr12:120425760-120425761	Bivalent Enhancer Enhancers Active TSS Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs181138498	chr12:120425803-120425804	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs201702931	chr12:120425818-120425819	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
41	rs372481273	chr12:120425820-120425821	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs557383563	chr12:120425880-120425881	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
43	rs74669564	chr12:120425882-120425883	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs545959543	chr12:120425907-120425908	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs76250741	chr12:120425975-120425976	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs186436726	chr12:120425989-120425990	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs542502357	chr12:120426003-120426004	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs561989620	chr12:120426073-120426074	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs530889812	chr12:120426087-120426088	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs544730458	chr12:120426226-120426227	Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	21390271	CNVD
Cancer	20164919	CNVD
Cancer	16751803	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Wilms tumour	21544195	CNVD
Ovarian cancer	21720365	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Breast cancer	16397240	CNVD
Sudden cardiac death	19188705	CNVD
Breast cancer	17133270	CNVD
Breast cancer	17603634	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Schizophrenia	18923514	CNVD
Schizophrenia	22241247	CNVD
Cryptorchidism	21048976	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Neuroblastoma	18923191	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21806811	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Urothelial carcinoma	21177765	CNVD
Prostate cancer	18632612	CNVD
Myelofibrosis	22110671	CNVD
Beckwith-Wiedemann syndrome	20648245	CNVD
Developmental delay	21457577	CNVD
dysmorphic	21457577	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:581 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:120424000-120425800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
2	chr12:120424600-120426200	Enhancers	H9 Cell Line	embryonic stem cell
3	chr12:120425200-120425800	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
4	chr12:120425400-120426000	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
5	chr12:120425600-120425800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
6	chr12:120425600-120425800	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
7	chr12:120425600-120425800	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr12:120425600-120425800	Bivalent Enhancer	HepG2	liver
9	chr12:120425600-120426000	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
10	chr12:120425600-120426000	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr12:120425600-120426000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr12:120425600-120426200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr12:120425600-120426200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
14	chr12:120425800-120426000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
15	chr12:120425800-120426000	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
16	chr12:120425800-120426000	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
17	chr12:120425800-120426000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
18	chr12:120425800-120426000	Enhancers	Primary T helper naive cells from peripheral blood	blood
19	chr12:120425800-120426000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
20	chr12:120425800-120426000	Enhancers	Brain Cingulate Gyrus	brain
21	chr12:120425800-120426000	Bivalent Enhancer	Duodenum Mucosa	Duodenum
22	chr12:120425800-120426000	Bivalent Enhancer	Fetal Brain Female	brain
23	chr12:120425800-120426000	Bivalent Enhancer	A549	lung
24	chr12:120425800-120426200	Flanking Bivalent TSS/Enh	ES-I3 Cell Line	embryonic stem cell
25	chr12:120425800-120426200	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr12:120425800-120426200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
27	chr12:120425800-120426200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
28	chr12:120425800-120426200	Enhancers	Breast Myoepithelial Primary Cells	Breast
29	chr12:120425800-120426200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr12:120425800-120426200	Enhancers	Primary B cells from peripheral blood	blood
31	chr12:120425800-120426200	Enhancers	Primary T cells fromperipheralblood	blood
32	chr12:120425800-120426200	Enhancers	Primary hematopoietic stem cells	blood
33	chr12:120425800-120426200	Enhancers	Primary T helper cells fromperipheralblood	blood
34	chr12:120425800-120426200	Enhancers	Primary T killer memory cells from peripheral blood	blood
35	chr12:120425800-120426200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr12:120425800-120426200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr12:120425800-120426200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
38	chr12:120425800-120426200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
39	chr12:120425800-120426200	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
40	chr12:120425800-120426200	Active TSS	Rectal Mucosa Donor 29	rectum
41	chr12:120425800-120426200	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
42	chr12:120425800-120426200	Bivalent Enhancer	Dnd41	blood
43	chr12:120425800-120426200	Enhancers	Hela-S3	cervix
44	chr12:120425800-120426200	Enhancers	HepG2	liver
45	chr12:120425800-120426200	Enhancers	HMEC	breast
46	chr12:120425800-120426200	Enhancers	K562	blood
47	chr12:120425800-120426400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr12:120425800-120426400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
49	chr12:120425800-120426400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
50	chr12:120426000-120426200	Flanking Active TSS	ES-WA7 Cell Line	embryonic stem cell

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