Variant report

Variant	esv3421596
Chromosome Location	chr5:94954196-94958694
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:408)
CpG islands
(count:672)
Chromatin interactive
region (count:5)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:408 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr5:94956255-94956410	H1-hESC	embryonic stem cell:	n/a	n/a
2	BCL3	chr5:94956033-94956548	GM12878	blood:	n/a	n/a
3	BCLAF1	chr5:94956738-94957191	GM12878	blood:	n/a	n/a
4	BCLAF1	chr5:94955556-94956455	GM12878	blood:	n/a	chr5:94955667-94955680 chr5:94955902-94955915
5	BHLHE40	chr5:94956200-94956812	HepG2	liver:	n/a	n/a
6	BHLHE40	chr5:94955751-94956678	GM12878	blood:	n/a	n/a
7	CHD1	chr5:94956205-94956437	GM12878	blood:	n/a	n/a
8	CHD2	chr5:94956081-94956324	H1-hESC	embryonic stem cell:	n/a	n/a
9	CHD2	chr5:94955610-94956605	GM12878	blood:	n/a	chr5:94955898-94955908
10	CHD2	chr5:94956838-94957147	H1-hESC	embryonic stem cell:	n/a	n/a
11	CHD2	chr5:94956847-94957456	GM12878	blood:	n/a	n/a
12	CREB1	chr5:94956131-94957568	GM12878	blood:	n/a	n/a
13	CREB1	chr5:94956237-94956602	A549	lung:	n/a	n/a
14	CTBP2	chr5:94955549-94957276	H1-hESC	embryonic stem cell:	n/a	n/a
15	CTCF	chr5:94956880-94957030	WERI-Rb-1	eye:	n/a	n/a
16	CTCF	chr5:94956280-94956430	GM12878	blood:	n/a	n/a
17	CTCF	chr5:94956260-94956410	HMF	breast:	n/a	n/a
18	CTCF	chr5:94957300-94957450	SK-N-SH_RA	brain:	n/a	n/a
19	CTCF	chr5:94956200-94956350	GM12872	blood:	n/a	n/a
20	CTCF	chr5:94956880-94957030	GM12865	blood:	n/a	n/a
21	CTCF	chr5:94956740-94956890	HCM	heart:	n/a	n/a
22	CTCF	chr5:94956315-94956494	MCF-7	breast:	n/a	n/a
23	CTCF	chr5:94956364-94956492	H1-hESC	embryonic stem cell:	n/a	n/a
24	CTCF	chr5:94956945-94957033	Gliobla	brain:	n/a	n/a
25	CTCF	chr5:94956280-94956430	HMEC	breast:	n/a	n/a
26	CTCF	chr5:94956227-94956528	GM12892	blood:	n/a	n/a
27	CTCF	chr5:94957555-94957613	Lung_OC	lung:	n/a	n/a
28	CTCF	chr5:94956880-94957030	GM12871	blood:	n/a	n/a
29	CTCF	chr5:94956317-94956515	NHEK	skin:	n/a	n/a
30	CTCF	chr5:94956844-94957134	GM12891	blood:	n/a	n/a
31	CTCF	chr5:94956243-94956514	GM12891	blood:	n/a	n/a
32	CTCF	chr5:94956334-94956498	ProgFib	skin:	n/a	n/a
33	CTCF	chr5:94956972-94957030	ProgFib	skin:	n/a	n/a
34	CTCF	chr5:94956140-94956290	GM06990	blood:	n/a	n/a
35	CTCF	chr5:94956305-94956530	Fibrobl	skin:	n/a	n/a
36	CTCF	chr5:94956280-94956430	GM12871	blood:	n/a	n/a
37	CTCF	chr5:94956900-94957050	GM12873	blood:	n/a	n/a
38	CTCF	chr5:94956280-94956430	SAEC	small airway:	n/a	n/a
39	CTCF	chr5:94956800-94957133	GM19238	blood:	n/a	n/a
40	CTCF	chr5:94956280-94956430	AG09309	skin:	n/a	n/a
41	CTCF	chr5:94956320-94956470	GM12869	blood:	n/a	n/a
42	CTCF	chr5:94956320-94956470	GM12864	blood:	n/a	n/a
43	CTCF	chr5:94956080-94956230	WERI-Rb-1	eye:	n/a	n/a
44	CTCF	chr5:94956363-94956467	MCF-7	breast:	n/a	n/a
45	CTCF	chr5:94956140-94956290	HUVEC	blood vessel:	n/a	n/a
46	CTCF	chr5:94956940-94957090	GM12875	blood:	n/a	n/a
47	CTCF	chr5:94956300-94956450	AG04449	skin:	n/a	n/a
48	CTCF	chr5:94956225-94956549	MCF-7	breast:	n/a	n/a
49	CTCF	chr5:94956845-94957146	GM19239	blood:	n/a	n/a
50	CTCF	chr5:94956860-94957010	BJ	skin:	n/a	n/a

(count:672 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:94956017-94956067	HRE	kidney:	n/a
2	chr5:94956017-94956067	HRE	kidney:	n/a
3	chr5:94956900-94956950	NHBE	bronchial:	n/a
4	chr5:94955756-94955806	HAEpiC	amniotic membrane:	n/a
5	chr5:94955789-94955839	SKMC	muscle:	n/a
6	chr5:94955789-94955839	HIPEpiC	eye:	n/a
7	chr5:94957243-94957293	GM12878	blood:	n/a
8	chr5:94957269-94957319	GM06990	blood:	n/a
9	chr5:94957243-94957293	Hela-S3	cervix:	n/a
10	chr5:94955880-94955930	NT2-D1	testis:	n/a
11	chr5:94957243-94957293	PrEC	prostate:	n/a
12	chr5:94957243-94957293	SKMC	muscle:	n/a
13	chr5:94956900-94956950	HCM	heart:	n/a
14	chr5:94955575-94955625	HAEpiC	amniotic membrane:	n/a
15	chr5:94955756-94955806	HCM	heart:	n/a
16	chr5:94955789-94955839	SK-N-SH	brain:	n/a
17	chr5:94955789-94955839	AG04449	skin:	fetal
18	chr5:94955893-94955943	ProgFib	skin:	n/a
19	chr5:94955880-94955930	HCF	heart:	n/a
20	chr5:94957243-94957293	Caco-2	colon:	n/a
21	chr5:94955880-94955930	GM19239	blood:	n/a
22	chr5:94955880-94955930	HRE	kidney:	n/a
23	chr5:94957269-94957319	SAEC	small airway:	n/a
24	chr5:94955816-94955866	HNPCEpiC	eye:	n/a
25	chr5:94955789-94955839	Hela-S3	cervix:	n/a
26	chr5:94956900-94956950	GM06990	blood:	n/a
27	chr5:94956017-94956067	PFSK-1	brain:	n/a
28	chr5:94956175-94956225	HNPCEpiC	eye:	n/a
29	chr5:94955893-94955943	NB4	blood:	n/a
30	chr5:94955880-94955930	U87	brain:	n/a
31	chr5:94957269-94957319	HRPEpiC	eye:	n/a
32	chr5:94956900-94956950	Jurkat	blood:	n/a
33	chr5:94957269-94957319	Caco-2	colon:	n/a
34	chr5:94956175-94956225	HAEpiC	amniotic membrane:	n/a
35	chr5:94955893-94955943	MCF10A-Er-Src	breast:	n/a
36	chr5:94957269-94957319	AoSMC	blood vessel:	n/a
37	chr5:94955756-94955806	IMR90	lung:	fetal
38	chr5:94957243-94957293	HL-60	blood:	n/a
39	chr5:94955756-94955806	GM19239	blood:	n/a
40	chr5:94955816-94955866	U87	brain:	n/a
41	chr5:94956175-94956225	AG10803	skin:	n/a
42	chr5:94957269-94957319	NT2-D1	testis:	n/a
43	chr5:94957243-94957293	BJ	skin:	n/a
44	chr5:94955575-94955625	ovcar-3	ovarian:	n/a
45	chr5:94955816-94955866	NHBE	bronchial:	n/a
46	chr5:94955756-94955806	GM12892	blood:	n/a
47	chr5:94957269-94957319	SK-N-SH_RA	brain:	n/a
48	chr5:94955880-94955930	SK-N-SH_RA	brain:	n/a
49	chr5:94957269-94957319	HUVEC	blood vessel:	n/a
50	chr5:94955880-94955930	ProgFib	skin:	n/a

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:94951476..94954294-chr5:94957994..94960881,2	MCF-7	breast:
2	chr5:94951476..94954294-chr5:94957994..94960881,2	MCF-7	breast:
3	chr5:94953437..94955411-chr5:95066946..95068798,2	K562	blood:
4	chr5:94889800..94892273-chr5:94955578..94957837,2	MCF-7	breast:
5	chr5:94953878..94956024-chr5:94981084..94983825,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SPATA9-2	chr5:94946081-94955781	NONHSAT102852

No data

Variant related genes	Relation type
GPR150	TF binding region
GPR150	CpG island
ENSG00000250240	chromatin interactions
ENSG00000164292	chromatin interactions
ENSG00000164291	chromatin interactions
ENSG00000175449	chromatin interactions
ENSG00000198677	chromatin interactions

Extended variants
information (count: 165 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:165 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs62365863	chr5:94954225-94954226	Weak transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
2	rs566020285	chr5:94954233-94954234	Weak transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
3	rs535155256	chr5:94954244-94954245	Weak transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
4	rs554781666	chr5:94954264-94954265	Weak transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
5	rs574859262	chr5:94954271-94954272	Weak transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
6	rs537447985	chr5:94954319-94954320	Weak transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
7	rs184155628	chr5:94954466-94954467	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
8	rs577248847	chr5:94954477-94954478	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
9	rs371585166	chr5:94954480-94954481	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
10	rs141948217	chr5:94954546-94954547	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
11	rs188858688	chr5:94954547-94954548	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
12	rs181656227	chr5:94954562-94954563	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
13	rs541874052	chr5:94954612-94954613	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
14	rs375837544	chr5:94954616-94954617	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
15	rs561467832	chr5:94954639-94954640	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
16	rs77205314	chr5:94954709-94954710	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
17	rs115381697	chr5:94954765-94954766	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
18	rs186132123	chr5:94954784-94954785	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
19	rs34467019	chr5:94954789-94954790	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
20	rs111369655	chr5:94954797-94954798	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
21	rs547411873	chr5:94954816-94954817	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
22	rs532695955	chr5:94954824-94954825	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
23	rs552480610	chr5:94954940-94954941	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
24	rs566231856	chr5:94954956-94954957	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
25	rs190483774	chr5:94955101-94955102	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
26	rs548619292	chr5:94955118-94955119	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
27	rs150734800	chr5:94955123-94955124	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
28	rs537429591	chr5:94955125-94955126	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
29	rs180672274	chr5:94955161-94955162	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
30	rs557436363	chr5:94955163-94955164	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
31	rs570735045	chr5:94955191-94955192	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
32	rs539753487	chr5:94955229-94955230	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
33	rs553007127	chr5:94955265-94955266	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
34	rs572963986	chr5:94955273-94955274	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
35	rs185983080	chr5:94955277-94955278	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
36	rs138004396	chr5:94955296-94955297	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
37	rs575042192	chr5:94955297-94955298	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
38	rs543783822	chr5:94955311-94955312	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
39	rs563774900	chr5:94955350-94955351	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
40	rs539580610	chr5:94955358-94955359	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
41	rs9314152	chr5:94955383-94955384	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs149451315	chr5:94955388-94955389	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
43	rs145949519	chr5:94955391-94955392	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
44	rs371613221	chr5:94955395-94955396	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
45	rs535626578	chr5:94955429-94955430	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
46	rs528647837	chr5:94955441-94955442	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
47	rs548837944	chr5:94955445-94955446	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
48	rs139819523	chr5:94955450-94955451	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
49	rs113618287	chr5:94955564-94955565	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
50	rs2194051	chr5:94955602-94955603	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Merkel cell carcinoma	19020549	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Testicular cancer	18059402	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Mental retardation	19471318	CNVD
Renal cell carcinoma	18194544	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	16774939	CNVD
Williams Syndrome	20824207	CNVD
small cell lung cancer	20016488	CNVD
Schizophrenia	20967226	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:535 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94927000-94954200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr5:94927000-94954200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr5:94938200-94954400	Weak transcription	Primary T cells from cord blood	blood
4	chr5:94949000-94955000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr5:94949800-94955000	Weak transcription	Primary B cells from cord blood	blood
6	chr5:94951000-94955400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr5:94952200-94954600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
8	chr5:94952200-94955400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr5:94952400-94954600	Enhancers	Primary T helper cells PMA-I stimulated	--
10	chr5:94953000-94954400	Weak transcription	Pancreas	Pancrea
11	chr5:94953000-94955200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr5:94953200-94954200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
13	chr5:94953200-94954400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr5:94953200-94954600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr5:94953200-94954600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr5:94953200-94954600	Weak transcription	HUVEC	blood vessel
17	chr5:94953200-94955000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr5:94953200-94955000	Weak transcription	NH-A	brain
19	chr5:94953200-94955200	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr5:94953200-94955200	Weak transcription	GM12878-XiMat	blood
21	chr5:94953200-94955200	Weak transcription	Osteobl	bone
22	chr5:94953200-94955400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr5:94953200-94955400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr5:94953200-94955600	Enhancers	NHEK	skin
25	chr5:94953800-94955000	Enhancers	Primary T helper cells fromperipheralblood	blood
26	chr5:94953800-94955800	Weak transcription	HMEC	breast
27	chr5:94954000-94955000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
28	chr5:94954200-94954800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr5:94954200-94955200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
30	chr5:94954200-94955400	Enhancers	Primary T helper naive cells from peripheral blood	blood
31	chr5:94954400-94954600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr5:94954400-94955000	Enhancers	Pancreatic Islets	Pancreatic Islet
33	chr5:94954400-94955000	Enhancers	Pancreas	Pancrea
34	chr5:94954400-94955200	Enhancers	Primary T cells from cord blood	blood
35	chr5:94954400-94955200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
36	chr5:94954400-94955400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
37	chr5:94954400-94955400	Bivalent Enhancer	Duodenum Smooth Muscle	Duodenum
38	chr5:94954600-94954800	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
39	chr5:94954600-94954800	Bivalent Enhancer	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr5:94954600-94954800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr5:94954600-94954800	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr5:94954600-94954800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr5:94954600-94954800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr5:94954600-94955000	Enhancers	Primary T killer memory cells from peripheral blood	blood
45	chr5:94954600-94955000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr5:94954600-94955000	Enhancers	Brain Angular Gyrus	brain
47	chr5:94954600-94955200	Enhancers	HUVEC	blood vessel
48	chr5:94954600-94955400	Enhancers	Primary T cells fromperipheralblood	blood
49	chr5:94954600-94955400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr5:94954600-94955600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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