Variant report

Variant	esv3422629
Chromosome Location	chr1:224620954-224623702
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:881)
CpG islands
(count:858)
Chromatin interactive
region (count:13)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:881 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:224620424-224621189	K562	blood:	n/a	n/a
2	ARID3A	chr1:224622583-224622912	HepG2	liver:	n/a	n/a
3	ARID3A	chr1:224620759-224620996	HepG2	liver:	n/a	n/a
4	ATF1	chr1:224622366-224622719	K562	blood:	n/a	chr1:224622509-224622523
5	ATF2	chr1:224622365-224622818	GM12878	blood:	n/a	chr1:224622509-224622523
6	ATF2	chr1:224622416-224622736	GM12878	blood:	n/a	chr1:224622509-224622523
7	ATF3	chr1:224622360-224622709	K562	blood:	n/a	n/a
8	BCL3	chr1:224622354-224622895	GM12878	blood:	n/a	n/a
9	BCL3	chr1:224622320-224623145	A549	lung:	n/a	chr1:224623074-224623082
10	BCL3	chr1:224622392-224623095	A549	lung:	n/a	chr1:224623074-224623082
11	BCLAF1	chr1:224622335-224623088	GM12878	blood:	n/a	chr1:224623074-224623082
12	BHLHE40	chr1:224622348-224623339	GM12878	blood:	n/a	n/a
13	BHLHE40	chr1:224622416-224622865	A549	lung:	n/a	n/a
14	BHLHE40	chr1:224622385-224623559	K562	blood:	n/a	n/a
15	BHLHE40	chr1:224620832-224620992	K562	blood:	n/a	n/a
16	BHLHE40	chr1:224622453-224622706	HepG2	liver:	n/a	n/a
17	BHLHE40	chr1:224622399-224623256	HepG2	liver:	n/a	n/a
18	BRCA1	chr1:224622995-224623460	Hela-S3	cervix:	n/a	n/a
19	BRCA1	chr1:224622533-224622818	GM12878	blood:	n/a	n/a
20	BRCA1	chr1:224620897-224621113	H1-hESC	embryonic stem cell:	n/a	n/a
21	BRCA1	chr1:224621935-224621958	H1-hESC	embryonic stem cell:	n/a	n/a
22	BRCA1	chr1:224622425-224622722	Hela-S3	cervix:	n/a	n/a
23	CBX3	chr1:224622348-224623594	K562	blood:	n/a	n/a
24	CBX3	chr1:224620285-224621183	K562	blood:	n/a	n/a
25	CBX3	chr1:224622412-224622884	K562	blood:	n/a	n/a
26	CCNT2	chr1:224620087-224621007	K562	blood:	n/a	chr1:224620927-224620936
27	CCNT2	chr1:224621435-224622066	K562	blood:	n/a	chr1:224622028-224622037
28	CCNT2	chr1:224622321-224623532	K562	blood:	n/a	n/a
29	CEBPB	chr1:224622488-224623350	H1-hESC	embryonic stem cell:	n/a	chr1:224622987-224622998
30	CEBPB	chr1:224622758-224623267	ECC-1	luminal epithelium:	n/a	chr1:224622987-224622998
31	CEBPB	chr1:224622812-224623135	HepG2	liver:	n/a	chr1:224622987-224622998
32	CEBPB	chr1:224622826-224623367	A549	lung:	n/a	chr1:224622987-224622998
33	CEBPB	chr1:224622495-224623596	IMR90	lung:	n/a	chr1:224622987-224622998
34	CEBPB	chr1:224622422-224623556	K562	blood:	n/a	chr1:224622987-224622998
35	CEBPB	chr1:224622395-224623531	Hela-S3	cervix:	n/a	chr1:224622987-224622998
36	CEBPB	chr1:224622423-224623586	K562	blood:	n/a	chr1:224622987-224622998
37	CEBPD	chr1:224622358-224622744	K562	blood:	n/a	n/a
38	CEBPD	chr1:224622332-224622746	HepG2	liver:	n/a	n/a
39	CHD1	chr1:224621822-224622023	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD1	chr1:224621797-224622107	GM12878	blood:	n/a	chr1:224622029-224622039
41	CHD1	chr1:224622921-224622984	H1-hESC	embryonic stem cell:	n/a	n/a
42	CHD1	chr1:224622760-224623011	GM12878	blood:	n/a	n/a
43	CHD1	chr1:224619829-224624127	IMR90	lung:	n/a	chr1:224622029-224622039 chr1:224621298-224621308
44	CHD1	chr1:224620986-224621159	H1-hESC	embryonic stem cell:	n/a	n/a
45	CHD1	chr1:224622371-224622539	GM12878	blood:	n/a	n/a
46	CHD1	chr1:224620909-224621003	GM12878	blood:	n/a	n/a
47	CHD1	chr1:224621425-224621540	GM12878	blood:	n/a	n/a
48	CHD2	chr1:224622461-224622829	HepG2	liver:	n/a	n/a
49	CHD2	chr1:224620776-224621158	Hela-S3	cervix:	n/a	n/a
50	CHD2	chr1:224620791-224621157	K562	blood:	n/a	n/a

(count:858 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:224622813-224622863	MCF10A-Er-Src	breast:	n/a
2	chr1:224622516-224622566	SK-N-MC	brain:	n/a
3	chr1:224622598-224622648	U87	brain:	n/a
4	chr1:224621834-224621884	HEK293	kidney:	embryo
5	chr1:224622813-224622863	MCF10A-Er-Src	breast:	n/a
6	chr1:224622516-224622566	SK-N-MC	brain:	n/a
7	chr1:224622598-224622648	U87	brain:	n/a
8	chr1:224621834-224621884	HEK293	kidney:	embryo
9	chr1:224622605-224622655	SKMC	muscle:	n/a
10	chr1:224622813-224622863	AG09319	gingival:	n/a
11	chr1:224622430-224622480	NHDF-neo	bronchial:	n/a
12	chr1:224621880-224621930	IMR90	lung:	fetal
13	chr1:224622516-224622566	NB4	blood:	n/a
14	chr1:224622855-224622905	PFSK-1	brain:	n/a
15	chr1:224622131-224622181	MCF-7	breast:	n/a
16	chr1:224622417-224622467	Jurkat	blood:	n/a
17	chr1:224621880-224621930	GM19239	blood:	n/a
18	chr1:224622813-224622863	BJ	skin:	n/a
19	chr1:224621452-224621502	HCT-116	colon:	n/a
20	chr1:224621834-224621884	GM06990	blood:	n/a
21	chr1:224621880-224621930	GM06990	blood:	n/a
22	chr1:224622430-224622480	NHBE	bronchial:	n/a
23	chr1:224622598-224622648	NH-A	brain:	n/a
24	chr1:224622131-224622181	GM06990	blood:	n/a
25	chr1:224622417-224622467	K562	blood:	n/a
26	chr1:224622510-224622560	HL-60	blood:	n/a
27	chr1:224621880-224621930	HIPEpiC	eye:	n/a
28	chr1:224622510-224622560	AoSMC	blood vessel:	n/a
29	chr1:224621861-224621911	NHBE	bronchial:	n/a
30	chr1:224622430-224622480	H1-hESC	embryonic stem cell:	embryo
31	chr1:224622126-224622176	BJ	skin:	n/a
32	chr1:224622516-224622566	HRPEpiC	eye:	n/a
33	chr1:224622131-224622181	HCT-116	colon:	n/a
34	chr1:224622417-224622467	HEEpiC	esophagus:	n/a
35	chr1:224621861-224621911	HIPEpiC	eye:	n/a
36	chr1:224621452-224621502	GM12891	blood:	n/a
37	chr1:224622430-224622480	HCT-116	colon:	n/a
38	chr1:224622516-224622566	Hepatocyte	liver:	n/a
39	chr1:224622813-224622863	IMR90	lung:	fetal
40	chr1:224622510-224622560	LNCaP	prostate:	n/a
41	chr1:224622855-224622905	HCM	heart:	n/a
42	chr1:224622131-224622181	SK-N-MC	brain:	n/a
43	chr1:224622598-224622648	HMEC	breast:	n/a
44	chr1:224621834-224621884	PFSK-1	brain:	n/a
45	chr1:224621880-224621930	NHDF-neo	bronchial:	n/a
46	chr1:224622126-224622176	HEK293	kidney:	embryo
47	chr1:224622855-224622905	GM19239	blood:	n/a
48	chr1:224621861-224621911	HCF	heart:	n/a
49	chr1:224622813-224622863	HRCEpiC	kidney:	n/a
50	chr1:224622516-224622566	MCF-7	breast:	n/a

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:224585388..224587684-chr1:224620366..224622924,3	K562	blood:
2	chr1:224543329..224547108-chr1:224619239..224622996,5	MCF-7	breast:
3	chr1:224620020..224622844-chr1:224624641..224626201,2	MCF-7	breast:
4	chr1:224300372..224302965-chr1:224620010..224622203,2	K562	blood:
5	chr1:224595603..224601847-chr1:224621020..224623770,7	MCF-7	breast:
6	chr1:224586518..224588836-chr1:224621196..224623489,2	MCF-7	breast:
7	chr1:224301465..224303000-chr1:224620703..224623446,2	K562	blood:
8	chr1:224544325..224548164-chr1:224620481..224623704,4	K562	blood:
9	chr1:224370348..224372775-chr1:224619496..224622200,4	K562	blood:
10	chr1:224543781..224546462-chr1:224616960..224621011,5	K562	blood:
11	chr1:224622290..224622794-chr10:98591846..98592614,2	Hela-S3	cervix:
12	chr1:224621434..224624086-chr12:120727815..120730107,2	MCF-7	breast:
13	chr1:224370348..224372410-chr1:224620146..224621939,2	K562	blood:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CNIH3-2	chr1:224623283-224623314	NONHSAT009806
2	lnc-NVL-2	chr1:224623157-224623593	XLOC_001227
3	lnc-CNIH3-2	chr1:224622627-224622889	NONHSAT009804
4	lnc-CNIH3-2	chr1:224622614-224622889	NONHSAT009803
5	lnc-CNIH3-2	chr1:224622362-224622564	NONHSAT009801
6	lnc-CNIH3-2	chr1:224622442-224622564	NONHSAT009802

No data

Variant related genes	Relation type
CNIH3	TF binding region
WDR26	TF binding region
CNIH3	CpG island
WDR26	CpG island
ENSG00000202538	chromatin interactions
ENSG00000143756	chromatin interactions
ENSG00000162923	chromatin interactions
ENSG00000196233	chromatin interactions
ENSG00000143753	chromatin interactions
ENSG00000266618	chromatin interactions
ENSG00000143771	chromatin interactions
SPOPL	miRNA target sites

Extended variants
information (count: 72 )
Associated
traits (count: 101 )

Variant overlapped rSNPs/rCNVs (count:72 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs117004890	chr1:224621094-224621095	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs561041936	chr1:224621135-224621136	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs533936469	chr1:224621147-224621148	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs374046193	chr1:224621159-224621160	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs11584670	chr1:224621165-224621166	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs549749031	chr1:224621188-224621189	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs562470336	chr1:224621199-224621200	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs533097128	chr1:224621222-224621223	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs543600747	chr1:224621231-224621232	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs111373332	chr1:224621267-224621268	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs80059326	chr1:224621282-224621283	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs566554136	chr1:224621325-224621326	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs201638957	chr1:224621334-224621335	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs533990121	chr1:224621340-224621341	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs2405033	chr1:224621368-224621369	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs201122571	chr1:224621371-224621372	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs537871897	chr1:224621421-224621422	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs556219046	chr1:224621475-224621476	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs571231334	chr1:224621505-224621506	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs375450160	chr1:224621533-224621534	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs202205027	chr1:224621538-224621539	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs376377143	chr1:224621582-224621583	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
23	rs554397105	chr1:224621610-224621611	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
24	rs202137376	chr1:224621614-224621615	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
25	rs543194934	chr1:224621658-224621659	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
26	rs369486412	chr1:224621661-224621662	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
27	rs576106391	chr1:224621728-224621729	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
28	rs543483118	chr1:224621729-224621730	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
29	rs564951071	chr1:224621745-224621746	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
30	rs561995973	chr1:224621773-224621774	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
31	rs532496036	chr1:224621787-224621788	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
32	rs545023241	chr1:224621867-224621868	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
33	rs144531645	chr1:224621906-224621907	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
34	rs377271925	chr1:224621907-224621908	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
35	rs35365551	chr1:224621934-224621935	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs72758337	chr1:224621941-224621942	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
37	rs559879416	chr1:224622274-224622275	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs527528263	chr1:224622280-224622281	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs549176959	chr1:224622324-224622325	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
40	rs567442975	chr1:224622440-224622441	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
41	rs531451810	chr1:224622448-224622449	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
42	rs192114388	chr1:224622450-224622451	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
43	rs112454893	chr1:224622451-224622452	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
44	rs571156479	chr1:224622458-224622459	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
45	rs552352670	chr1:224622540-224622541	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
46	rs538623077	chr1:224622546-224622547	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
47	rs554206066	chr1:224622610-224622611	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
48	rs192069094	chr1:224622764-224622765	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
49	rs574673620	chr1:224622768-224622769	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
50	rs536475488	chr1:224622878-224622879	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:101)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Mental retardation	19951919	CNVD
Non-syndromic sensorineural hearing loss	17873649	CNVD
Basal cell lymphoma	17053054	CNVD
Developmental delay	21147756	CNVD
Autism	14699429	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	20808228	CNVD
Fumarase deficiency	21572526	CNVD
Autism	17483303	CNVD
Kartagener syndrome	16639409	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Leukoplakia	24403051	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:433 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:224617600-224621000	Transcr. at gene 5' and 3'	K562	blood
2	chr1:224617600-224621200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr1:224617800-224621000	Flanking Active TSS	HUVEC	blood vessel
4	chr1:224618000-224621200	Flanking Active TSS	Primary hematopoietic stem cells	blood
5	chr1:224618400-224621000	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
6	chr1:224618400-224621000	Flanking Active TSS	Primary T cells from cord blood	blood
7	chr1:224618400-224622800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr1:224618400-224623400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr1:224618400-224623400	Active TSS	Right Atrium	heart
10	chr1:224618400-224623600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr1:224618600-224621200	Flanking Active TSS	Liver	Liver
12	chr1:224618600-224623400	Active TSS	Aorta	Aorta
13	chr1:224618800-224621000	Transcr. at gene 5' and 3'	A549	lung
14	chr1:224618800-224621800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr1:224618800-224622800	Active TSS	Breast Myoepithelial Primary Cells	Breast
16	chr1:224618800-224623000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr1:224619200-224621000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
18	chr1:224619200-224621000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr1:224619200-224621200	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
20	chr1:224619200-224621200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
21	chr1:224619200-224621200	Flanking Active TSS	Fetal Brain Female	brain
22	chr1:224619200-224621800	Flanking Active TSS	Primary B cells from cord blood	blood
23	chr1:224619400-224621000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
24	chr1:224619400-224621000	Flanking Active TSS	Adipose Nuclei	Adipose
25	chr1:224619400-224621400	Active TSS	Brain Germinal Matrix	brain
26	chr1:224619400-224623000	Active TSS	iPS-15b Cell Line	embryonic stem cell
27	chr1:224619400-224623200	Active TSS	Right Ventricle	heart
28	chr1:224619600-224621000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr1:224619600-224621000	Flanking Active TSS	Fetal Brain Male	brain
30	chr1:224619600-224621000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
31	chr1:224619600-224622600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr1:224619600-224622800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr1:224619600-224622800	Active TSS	Primary T cells fromperipheralblood	blood
34	chr1:224619600-224623000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
35	chr1:224619600-224623000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr1:224619600-224623200	Active TSS	ES-I3 Cell Line	embryonic stem cell
37	chr1:224619600-224623200	Active TSS	Fetal Intestine Large	intestine
38	chr1:224619600-224623200	Active TSS	GM12878-XiMat	blood
39	chr1:224619600-224623200	Active TSS	HSMMtube	muscle
40	chr1:224619600-224623400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr1:224619600-224623800	Active TSS	Psoas Muscle	Psoas
42	chr1:224619800-224622800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr1:224619800-224622800	Active TSS	Colonic Mucosa	Colon
44	chr1:224619800-224623000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr1:224619800-224623000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
46	chr1:224619800-224623000	Active TSS	Colon Smooth Muscle	Colon
47	chr1:224619800-224623000	Active TSS	Duodenum Smooth Muscle	Duodenum
48	chr1:224619800-224623000	Active TSS	Fetal Thymus	thymus
49	chr1:224619800-224623200	Active TSS	Rectal Mucosa Donor 29	rectum
50	chr1:224619800-224623400	Active TSS	NHLF	lung

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