Variant report

Variant	esv3424005
Chromosome Location	chr15:93424973-93427821
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:870)
CpG islands
(count:366)
Chromatin interactive
region (count:49)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:870 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:93424998-93426138	HepG2	liver:	n/a	n/a
2	ARID3A	chr15:93426945-93428834	K562	blood:	n/a	n/a
3	ARID3A	chr15:93426880-93427238	HepG2	liver:	n/a	n/a
4	ARID3A	chr15:93424936-93426085	K562	blood:	n/a	n/a
5	ATF1	chr15:93426949-93427230	K562	blood:	n/a	n/a
6	ATF1	chr15:93425181-93426122	K562	blood:	n/a	n/a
7	ATF2	chr15:93425195-93425815	GM12878	blood:	n/a	n/a
8	ATF2	chr15:93425342-93425780	GM12878	blood:	n/a	n/a
9	ATF2	chr15:93425235-93425885	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr15:93426743-93427391	GM12878	blood:	n/a	n/a
11	ATF3	chr15:93425888-93426377	A549	lung:	n/a	n/a
12	BACH1	chr15:93425130-93425624	K562	blood:	n/a	n/a
13	BCL3	chr15:93424683-93426269	A549	lung:	n/a	chr15:93426000-93426013 chr15:93425998-93426007 chr15:93426184-93426197 chr15:93424764-93424773
14	BCL3	chr15:93424747-93425837	A549	lung:	n/a	chr15:93424764-93424773
15	BCL3	chr15:93425831-93426259	GM12878	blood:	n/a	chr15:93426000-93426013 chr15:93425998-93426007 chr15:93426184-93426197
16	BCLAF1	chr15:93424888-93425692	GM12878	blood:	n/a	n/a
17	BCLAF1	chr15:93425765-93426319	GM12878	blood:	n/a	chr15:93426000-93426013 chr15:93425998-93426007 chr15:93426184-93426197
18	BCLAF1	chr15:93425759-93426324	K562	blood:	n/a	chr15:93426000-93426013 chr15:93425998-93426007 chr15:93426184-93426197
19	BCLAF1	chr15:93426815-93427380	GM12878	blood:	n/a	n/a
20	BHLHE40	chr15:93425100-93426159	K562	blood:	n/a	n/a
21	BHLHE40	chr15:93425060-93426209	HepG2	liver:	n/a	n/a
22	BHLHE40	chr15:93425161-93426221	GM12878	blood:	n/a	n/a
23	BRCA1	chr15:93425933-93426118	GM12878	blood:	n/a	n/a
24	BRCA1	chr15:93425327-93426146	Hela-S3	cervix:	n/a	n/a
25	BRCA1	chr15:93425119-93426148	HepG2	liver:	n/a	n/a
26	BRCA1	chr15:93426636-93427818	Hela-S3	cervix:	n/a	n/a
27	CBX3	chr15:93424770-93425699	K562	blood:	n/a	n/a
28	CBX3	chr15:93425849-93426216	K562	blood:	n/a	n/a
29	CCNT2	chr15:93425167-93426794	K562	blood:	n/a	chr15:93426614-93426623
30	CEBPB	chr15:93425088-93425794	H1-hESC	embryonic stem cell:	n/a	chr15:93425620-93425628
31	CEBPB	chr15:93426795-93427924	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr15:93424898-93425880	K562	blood:	n/a	chr15:93425620-93425628
33	CEBPB	chr15:93425042-93426126	A549	lung:	n/a	chr15:93425620-93425628
34	CEBPB	chr15:93425144-93425889	K562	blood:	n/a	chr15:93425620-93425628
35	CEBPB	chr15:93427725-93428840	K562	blood:	n/a	chr15:93428047-93428060 chr15:93428047-93428058
36	CEBPB	chr15:93425184-93426167	Hela-S3	cervix:	n/a	chr15:93425620-93425628
37	CEBPB	chr15:93425198-93425853	HepG2	liver:	n/a	chr15:93425620-93425628
38	CEBPD	chr15:93425392-93426293	HepG2	liver:	n/a	n/a
39	CEBPD	chr15:93425781-93426269	K562	blood:	n/a	n/a
40	CEBPD	chr15:93424981-93425746	K562	blood:	n/a	n/a
41	CEBPD	chr15:93425799-93426239	K562	blood:	n/a	n/a
42	CEBPD	chr15:93425902-93426218	HepG2	liver:	n/a	n/a
43	CEBPZ	chr15:93425007-93425858	HepG2	liver:	n/a	n/a
44	CHD1	chr15:93425915-93429328	H1-hESC	embryonic stem cell:	n/a	chr15:93426483-93426493 chr15:93426003-93426013
45	CHD1	chr15:93424992-93425681	H1-hESC	embryonic stem cell:	n/a	n/a
46	CHD1	chr15:93425092-93429680	GM12878	blood:	n/a	chr15:93426483-93426493 chr15:93426003-93426013
47	CHD1	chr15:93424901-93431299	IMR90	lung:	n/a	chr15:93426483-93426493 chr15:93426003-93426013
48	CHD2	chr15:93425223-93426200	GM12878	blood:	n/a	chr15:93426003-93426013
49	CHD2	chr15:93426487-93427132	Hela-S3	cervix:	n/a	n/a
50	CHD2	chr15:93425209-93426246	Hela-S3	cervix:	n/a	chr15:93426003-93426013

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:93424933-93424983	AG09309	skin:	n/a
2	chr15:93425855-93425905	PFSK-1	brain:	n/a
3	chr15:93424933-93424983	H1-hESC	embryonic stem cell:	embryo
4	chr15:93427738-93427788	NT2-D1	testis:	n/a
5	chr15:93425245-93425295	ECC-1	luminal epithelium:	n/a
6	chr15:93426637-93426687	AG04450	lung:	fetal
7	chr15:93426637-93426687	SKMC	muscle:	n/a
8	chr15:93424933-93424983	HepG2	liver:	n/a
9	chr15:93426002-93426052	ovcar-3	ovarian:	n/a
10	chr15:93425245-93425295	Hepatocyte	liver:	n/a
11	chr15:93424933-93424983	HCT-116	colon:	n/a
12	chr15:93426637-93426687	MCF10A-Er-Src	breast:	n/a
13	chr15:93425245-93425295	GM12891	blood:	n/a
14	chr15:93424933-93424983	HPAEpiC	pulmonary alveolar:	n/a
15	chr15:93427738-93427788	HEEpiC	esophagus:	n/a
16	chr15:93425855-93425905	U87	brain:	n/a
17	chr15:93426637-93426687	HPAEpiC	pulmonary alveolar:	n/a
18	chr15:93424933-93424983	CMK	blood:	n/a
19	chr15:93426637-93426687	Hela-S3	cervix:	n/a
20	chr15:93427738-93427788	SK-N-SH	brain:	n/a
21	chr15:93427738-93427788	IMR90	lung:	fetal
22	chr15:93425245-93425295	Hela-S3	cervix:	n/a
23	chr15:93425855-93425905	NHBE	bronchial:	n/a
24	chr15:93427738-93427788	GM12891	blood:	n/a
25	chr15:93424933-93424983	AG04449	skin:	fetal
26	chr15:93426002-93426052	GM12891	blood:	n/a
27	chr15:93426637-93426687	BE2_C	brain:	n/a
28	chr15:93426637-93426687	HL-60	blood:	n/a
29	chr15:93425855-93425905	Jurkat	blood:	n/a
30	chr15:93426002-93426052	MCF10A-Er-Src	breast:	n/a
31	chr15:93425855-93425905	GM12892	blood:	n/a
32	chr15:93424933-93424983	MCF-7	breast:	n/a
33	chr15:93425245-93425295	LNCaP	prostate:	n/a
34	chr15:93425245-93425295	NT2-D1	testis:	n/a
35	chr15:93426637-93426687	HRE	kidney:	n/a
36	chr15:93427738-93427788	SKMC	muscle:	n/a
37	chr15:93426002-93426052	HRPEpiC	eye:	n/a
38	chr15:93427738-93427788	PrEC	prostate:	n/a
39	chr15:93425855-93425905	AG04449	skin:	fetal
40	chr15:93425245-93425295	HNPCEpiC	eye:	n/a
41	chr15:93425245-93425295	IMR90	lung:	fetal
42	chr15:93427738-93427788	PANC-1	pancreas:	n/a
43	chr15:93424933-93424983	NHBE	bronchial:	n/a
44	chr15:93426002-93426052	H1-hESC	embryonic stem cell:	embryo
45	chr15:93425245-93425295	SK-N-SH	brain:	n/a
46	chr15:93426002-93426052	GM06990	blood:	n/a
47	chr15:93426637-93426687	AG10803	skin:	n/a
48	chr15:93427738-93427788	SK-N-SH_RA	brain:	n/a
49	chr15:93426637-93426687	NB4	blood:	n/a
50	chr15:93425855-93425905	NH-A	brain:	n/a

(count:49 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:93425880..93426448-chr22:19419287..19419861,2	Hela-S3	cervix:
2	chr15:93385510..93388463-chr15:93423179..93425134,2	K562	blood:
3	chr15:93337836..93370220-chr15:93420085..93452591,332	K562	blood:
4	chr1:101491188..101491749-chr15:93426290..93427209,2	Hela-S3	cervix:
5	chr15:93412399..93413366-chr15:93424771..93425883,5	MCF-7	breast:
6	chr15:93352256..93353063-chr15:93425255..93425934,3	Hela-S3	cervix:
7	chr15:93425618..93426327-chr5:44808930..44809610,2	Hela-S3	cervix:
8	chr15:93352208..93354404-chr15:93425621..93426740,6	MCF-7	breast:
9	chr11:61559605..61560105-chr15:93425741..93426488,2	Hela-S3	cervix:
10	chr15:93425765..93426393-chr8:145581684..145582273,2	HCT-116	colon:
11	chr1:186648896..186649559-chr15:93425048..93425747,2	Hela-S3	cervix:
12	chr15:93425715..93426614-chr15:93442901..93444013,3	MCF-7	breast:
13	chr15:93425070..93425680-chr9:33264389..33265229,2	HCT-116	colon:
14	chr15:93425600..93426427-chr8:128747188..128747893,2	Hela-S3	cervix:
15	chr15:93426546..93427161-chr9:132257403..132257942,2	Hela-S3	cervix:
16	chr15:93426839..93427818-chr9:96213584..96214428,2	Hela-S3	cervix:
17	chr15:93425672..93426403-chr2:96931759..96932498,2	Hela-S3	cervix:
18	chr15:93352634..93353153-chr15:93426164..93426733,2	Hela-S3	cervix:
19	chr1:200638243..200638833-chr15:93425999..93426748,2	Hela-S3	cervix:
20	chr15:93425116..93426959-chr6:26041379..26043913,2	MCF-7	breast:
21	chr15:93339450..93342002-chr15:93423524..93425580,2	MCF-7	breast:
22	chr12:122240075..122242240-chr15:93426091..93428308,2	K562	blood:
23	chr1:161102076..161102885-chr15:93425741..93426245,2	Hela-S3	cervix:
24	chr15:93424876..93427339-chr17:58154118..58156433,2	MCF-7	breast:
25	chr1:43282650..43283493-chr15:93425433..93425937,2	Hela-S3	cervix:
26	chr11:118991887..118992547-chr15:93425189..93426017,2	NB4	blood:
27	chr15:93425560..93426485-chr17:56736090..56737008,2	Hela-S3	cervix:
28	chr15:93197537..93199243-chr15:93427702..93429402,2	MCF-7	breast:
29	chr15:93333327..93367027-chr15:93419774..93462750,363	K562	blood:
30	chr15:93425919..93426466-chr17:48943152..48944136,2	HCT-116	colon:
31	chr15:93426014..93426615-chr8:146126495..146127404,2	Hela-S3	cervix:
32	chr15:93426015..93426748-chr2:85766185..85766857,2	Hela-S3	cervix:
33	chr14:24740252..24740952-chr15:93425313..93426012,2	Hela-S3	cervix:
34	chr15:93425841..93426770-chr20:23617945..23618689,2	Hela-S3	cervix:
35	chr12:57082176..57083030-chr15:93425152..93425714,2	Hela-S3	cervix:
36	chr12:46766505..46767057-chr15:93426546..93427455,2	Hela-S3	cervix:
37	chr11:8703694..8704591-chr15:93426286..93427015,2	Hela-S3	cervix:
38	chr15:93424784..93426792-chr15:93481094..93482707,2	MCF-7	breast:
39	chr11:62607333..62609223-chr15:93424710..93426737,2	K562	blood:
40	chr15:93425219..93426130-chr7:99613026..99613921,3	Hela-S3	cervix:
41	chr15:93352108..93352936-chr15:93425171..93425678,2	K562	blood:
42	chr15:93345383..93371459-chr15:93416796..93454653,318	MCF-7	breast:
43	chr15:59040871..59041490-chr15:93425219..93425886,2	Hela-S3	cervix:
44	chr15:93425198..93426173-chr6:74230195..74230813,2	Hela-S3	cervix:
45	chr15:93344712..93371031-chr15:93418700..93467618,365	MCF-7	breast:
46	chr15:69743883..69746535-chr15:93425105..93427133,2	MCF-7	breast:
47	chr11:18548153..18548751-chr15:93425186..93425734,2	Hela-S3	cervix:
48	chr15:93425767..93426386-chr5:64859059..64859755,2	Hela-S3	cervix:
49	chr15:93422990..93425055-chr15:93476703..93479164,2	K562	blood:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHD2-6	chr15:93426075-93426418	NONHSAT049673
2	lnc-CHD2-6	chr15:93427601-93428814	ENSG00000272888.1
3	lnc-CHD2-6	chr15:93426118-93426416	ENSG00000272888.1
4	lnc-CHD2-6	chr15:93426815-93427008	ENSG00000272888.1
5	lnc-CHD2-6	chr15:93426092-93426416	ENSG00000272888.1
6	lnc-CHD2-6	chr15:93426104-93426416	ENSG00000272888.1
7	lnc-CHD2-6	chr15:93426245-93426416	ENSG00000272888.1
8	lnc-CHD2-6	chr15:93426526-93426773	NONHSAT049676
9	lnc-CHD2-6	chr15:93426815-93427008	ENSG00000272888.1
10	lnc-CHD2-6	chr15:93426815-93426849	ENSG00000272888.1
11	lnc-CHD2-6	chr15:93426974-93427008	ENSG00000272888.1
12	lnc-CHD2-6	chr15:93426815-93427010	NONHSAT049673

No data

Variant related genes	Relation type
CHD2	TF binding region
ENSG00000272888	TF binding region
CHD2	CpG island
ENSG00000272888	CpG island
ENSG00000137845	chromatin interactions
ENSG00000164010	chromatin interactions
ENSG00000229980	chromatin interactions
ENSG00000258922	chromatin interactions
ENSG00000112996	chromatin interactions
ENSG00000113593	chromatin interactions
ENSG00000188938	chromatin interactions
ENSG00000100949	chromatin interactions
ENSG00000196150	chromatin interactions
ENSG00000107262	chromatin interactions
ENSG00000166441	chromatin interactions
ENSG00000168906	chromatin interactions
ENSG00000196226	chromatin interactions
ENSG00000185442	chromatin interactions
ENSG00000260088	chromatin interactions
ENSG00000204054	chromatin interactions
ENSG00000207601	chromatin interactions
ENSG00000086065	chromatin interactions
ENSG00000101439	chromatin interactions
ENSG00000158796	chromatin interactions
ENSG00000137818	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000185803	chromatin interactions
ENSG00000074319	chromatin interactions
ENSG00000172273	chromatin interactions
ENSG00000141232	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000136997	chromatin interactions
ENSG00000173575	chromatin interactions
ENSG00000185608	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000068097	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000182325	chromatin interactions
ENSG00000258527	chromatin interactions
ENSG00000139725	chromatin interactions
ENSG00000048828	chromatin interactions
ENSG00000212694	chromatin interactions
ENSG00000117543	chromatin interactions
ENSG00000233184	chromatin interactions
ENSG00000177868	chromatin interactions
ENSG00000144021	chromatin interactions
ENSG00000106261	chromatin interactions
ENSG00000139718	chromatin interactions
ENSG00000156508	chromatin interactions
ENSG00000073756	chromatin interactions

Extended variants
information (count: 94 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:94 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs566251722	chr15:93425079-93425080	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
2	rs533922195	chr15:93425121-93425122	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
3	rs553880920	chr15:93425123-93425124	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
4	rs566368585	chr15:93425132-93425133	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
5	rs570495640	chr15:93425167-93425168	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
6	rs554975390	chr15:93425200-93425201	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
7	rs539454793	chr15:93425302-93425303	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
8	rs185144814	chr15:93425327-93425328	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
9	rs576262601	chr15:93425343-93425344	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
10	rs542068134	chr15:93425372-93425373	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
11	rs190098490	chr15:93425376-93425377	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
12	rs571910400	chr15:93425417-93425418	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
13	rs541158929	chr15:93425434-93425435	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
14	rs564227631	chr15:93425509-93425510	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
15	rs143167172	chr15:93425513-93425514	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
16	rs147507435	chr15:93425516-93425517	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
17	rs192429561	chr15:93425520-93425521	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
18	rs58692762	chr15:93425523-93425524	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs549646234	chr15:93425527-93425528	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
20	rs3743470	chr15:93425541-93425542	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	mRNA abundance
21	rs113018163	chr15:93425542-93425543	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
22	rs78312768	chr15:93425549-93425550	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
23	rs551970181	chr15:93425552-93425553	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
24	rs558162564	chr15:93425558-93425559	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
25	rs576505832	chr15:93425561-93425562	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
26	rs549522590	chr15:93425570-93425571	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
27	rs377302238	chr15:93425583-93425584	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
28	rs569624702	chr15:93425589-93425590	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	22 gene(s)	Overlapped CNVs	n/a
29	rs78567551	chr15:93425637-93425638	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
30	rs555617706	chr15:93425644-93425645	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
31	rs571945612	chr15:93425711-93425712	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
32	rs117294489	chr15:93425763-93425764	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
33	rs557481924	chr15:93425816-93425817	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
34	rs8043280	chr15:93425874-93425875	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
35	rs543887287	chr15:93425888-93425889	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
36	rs144400758	chr15:93425942-93425943	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
37	rs573955689	chr15:93426100-93426101	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	32 gene(s)	Overlapped CNVs	n/a
38	rs542985931	chr15:93426113-93426114	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	32 gene(s)	Overlapped CNVs	n/a
39	rs560103468	chr15:93426116-93426117	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	32 gene(s)	Overlapped CNVs	n/a
40	rs528765589	chr15:93426125-93426126	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	32 gene(s)	Overlapped CNVs	n/a
41	rs184842620	chr15:93426249-93426250	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	29 gene(s)	Overlapped CNVs	n/a
42	rs565439475	chr15:93426336-93426337	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	31 gene(s)	Overlapped CNVs	n/a
43	rs112973871	chr15:93426368-93426369	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	31 gene(s)	Overlapped CNVs	n/a
44	rs188137591	chr15:93426489-93426490	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
45	rs569580972	chr15:93426539-93426540	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	20 gene(s)	Overlapped CNVs	n/a
46	rs180675595	chr15:93426541-93426542	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	20 gene(s)	Overlapped CNVs	n/a
47	rs548537883	chr15:93426558-93426559	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	22 gene(s)	Overlapped CNVs	n/a
48	rs368058508	chr15:93426564-93426565	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	22 gene(s)	Overlapped CNVs	n/a
49	rs565661581	chr15:93426566-93426567	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	22 gene(s)	Overlapped CNVs	n/a
50	rs371750393	chr15:93426595-93426596	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	22 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Sudden cardiac death	19188705	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17133270	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Epilepsy	19486360	CNVD
Acute myeloid leukemia	17237825	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Ovarian cancer	21720365	CNVD
Developmental delay	21147756	CNVD
Hepatocellular carcinoma	16750200	CNVD
Central neurocytomas	17123091	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Myelofibrosis	22110671	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD

Chromatin state (count:348 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:93412600-93425000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr15:93413600-93425200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr15:93413800-93425200	Weak transcription	Left Ventricle	heart
4	chr15:93420000-93425200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr15:93420200-93425000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr15:93420200-93425000	Enhancers	Fetal Heart	heart
7	chr15:93420400-93425200	Weak transcription	Psoas Muscle	Psoas
8	chr15:93421400-93425200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr15:93421800-93425200	Enhancers	Placenta	Placenta
10	chr15:93421800-93426000	Weak transcription	Ovary	ovary
11	chr15:93422000-93425000	Weak transcription	Lung	lung
12	chr15:93422000-93425200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr15:93422200-93425000	Weak transcription	Pancreas	Pancrea
14	chr15:93422200-93425200	Weak transcription	Right Ventricle	heart
15	chr15:93422200-93426000	Weak transcription	Gastric	stomach
16	chr15:93423000-93425000	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr15:93423200-93425000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr15:93423200-93425000	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr15:93423200-93425000	Enhancers	iPS-15b Cell Line	embryonic stem cell
20	chr15:93423200-93425000	Flanking Active TSS	Thymus	Thymus
21	chr15:93423200-93425200	Enhancers	H1 Cell Line	embryonic stem cell
22	chr15:93423200-93425200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
23	chr15:93423400-93425000	Enhancers	Skeletal Muscle Female	skeletal muscle
24	chr15:93423400-93425400	Flanking Active TSS	Dnd41	blood
25	chr15:93423400-93425600	Flanking Active TSS	Primary T cells from cord blood	blood
26	chr15:93423600-93425000	Enhancers	Primary B cells from peripheral blood	blood
27	chr15:93423600-93425000	Flanking Active TSS	Brain Germinal Matrix	brain
28	chr15:93423600-93425000	Enhancers	Fetal Brain Male	brain
29	chr15:93423600-93425400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
30	chr15:93423600-93425400	Flanking Active TSS	Fetal Thymus	thymus
31	chr15:93423600-93425600	Enhancers	Spleen	Spleen
32	chr15:93423800-93425200	Enhancers	Fetal Intestine Small	intestine
33	chr15:93423800-93425200	Weak transcription	Small Intestine	intestine
34	chr15:93423800-93425400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr15:93424000-93425000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr15:93424000-93425000	Enhancers	Hela-S3	cervix
37	chr15:93424000-93425200	Enhancers	Fetal Intestine Large	intestine
38	chr15:93424000-93425400	Flanking Active TSS	Duodenum Mucosa	Duodenum
39	chr15:93424000-93425400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
40	chr15:93424000-93425600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr15:93424000-93425600	Flanking Active TSS	K562	blood
42	chr15:93424200-93425000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr15:93424200-93425000	Enhancers	NHDF-Ad	bronchial
44	chr15:93424200-93425200	Weak transcription	H9 Cell Line	embryonic stem cell
45	chr15:93424200-93425200	Enhancers	Stomach Mucosa	stomach
46	chr15:93424200-93425400	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr15:93424200-93425400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr15:93424200-93425400	Weak transcription	Sigmoid Colon	Sigmoid Colon
49	chr15:93424200-93425400	Flanking Active TSS	A549	lung
50	chr15:93424200-93425400	Flanking Active TSS	NHEK	skin

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