Variant report

Variant	esv3425625
Chromosome Location	chr1:228289354-228292202
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:845)
CpG islands
(count:794)
Chromatin interactive
region (count:23)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:845 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:228290958-228291230	HepG2	liver:	n/a	n/a
2	ARID3A	chr1:228290189-228290228	HepG2	liver:	n/a	n/a
3	ATF1	chr1:228290831-228291309	K562	blood:	n/a	chr1:228291042-228291056
4	ATF2	chr1:228290720-228291333	GM12878	blood:	n/a	chr1:228291042-228291056
5	ATF2	chr1:228290868-228291235	GM12878	blood:	n/a	chr1:228291042-228291056
6	ATF2	chr1:228290867-228291306	H1-hESC	embryonic stem cell:	n/a	chr1:228291042-228291056
7	ATF3	chr1:228290804-228291268	GM12878	blood:	n/a	n/a
8	ATF3	chr1:228290845-228291306	K562	blood:	n/a	n/a
9	ATF3	chr1:228290767-228291318	A549	lung:	n/a	n/a
10	ATF3	chr1:228290821-228291185	HepG2	liver:	n/a	n/a
11	ATF3	chr1:228290861-228291292	K562	blood:	n/a	n/a
12	ATF3	chr1:228290808-228291346	HepG2	liver:	n/a	n/a
13	ATF3	chr1:228290833-228291303	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF3	chr1:228290820-228291323	A549	lung:	n/a	n/a
15	ATF3	chr1:228290567-228291300	K562	blood:	n/a	n/a
16	ATF3	chr1:228290962-228291155	GM12878	blood:	n/a	n/a
17	ATF3	chr1:228290764-228291308	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr1:228289948-228290353	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr1:228290859-228291160	H1-hESC	embryonic stem cell:	n/a	n/a
20	BCL3	chr1:228290835-228291333	A549	lung:	n/a	n/a
21	BCL3	chr1:228290744-228291242	A549	lung:	n/a	n/a
22	BCLAF1	chr1:228290546-228291332	GM12878	blood:	n/a	n/a
23	BCLAF1	chr1:228290725-228291432	GM12878	blood:	n/a	n/a
24	BHLHE40	chr1:228289250-228289465	K562	blood:	n/a	n/a
25	BHLHE40	chr1:228290075-228290312	K562	blood:	n/a	n/a
26	BHLHE40	chr1:228290835-228291234	GM12878	blood:	n/a	n/a
27	BHLHE40	chr1:228290676-228291233	K562	blood:	n/a	n/a
28	BRCA1	chr1:228291707-228291794	GM12878	blood:	n/a	n/a
29	BRCA1	chr1:228290904-228291181	HepG2	liver:	n/a	n/a
30	BRCA1	chr1:228290101-228290175	HepG2	liver:	n/a	n/a
31	BRCA1	chr1:228290882-228291227	GM12878	blood:	n/a	n/a
32	BRCA1	chr1:228290866-228291270	Hela-S3	cervix:	n/a	n/a
33	BRCA1	chr1:228290905-228291246	H1-hESC	embryonic stem cell:	n/a	n/a
34	CBX3	chr1:228289887-228290354	K562	blood:	n/a	n/a
35	CBX3	chr1:228290555-228291843	K562	blood:	n/a	n/a
36	CBX3	chr1:228290550-228291568	K562	blood:	n/a	n/a
37	CCNT2	chr1:228289710-228290409	K562	blood:	n/a	n/a
38	CCNT2	chr1:228291509-228291610	K562	blood:	n/a	n/a
39	CCNT2	chr1:228290613-228291263	K562	blood:	n/a	n/a
40	CEBPB	chr1:228290912-228291198	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr1:228290954-228291176	K562	blood:	n/a	n/a
42	CEBPB	chr1:228290875-228291228	H1-hESC	embryonic stem cell:	n/a	n/a
43	CEBPB	chr1:228290814-228291140	K562	blood:	n/a	n/a
44	CEBPD	chr1:228290700-228291079	HepG2	liver:	n/a	n/a
45	CEBPD	chr1:228290893-228291145	HepG2	liver:	n/a	n/a
46	CHD1	chr1:228290699-228290956	GM12878	blood:	n/a	n/a
47	CHD1	chr1:228290607-228290998	H1-hESC	embryonic stem cell:	n/a	n/a
48	CHD1	chr1:228291183-228291316	GM12878	blood:	n/a	n/a
49	CHD2	chr1:228289917-228290350	K562	blood:	n/a	n/a
50	CHD2	chr1:228291916-228291927	HepG2	liver:	n/a	n/a

(count:794 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:228291177-228291227	HepG2	liver:	n/a
2	chr1:228291177-228291227	HepG2	liver:	n/a
3	chr1:228290333-228290383	HL-60	blood:	n/a
4	chr1:228291118-228291168	GM12892	blood:	n/a
5	chr1:228291118-228291168	HNPCEpiC	eye:	n/a
6	chr1:228291705-228291755	HepG2	liver:	n/a
7	chr1:228291705-228291755	HAEpiC	amniotic membrane:	n/a
8	chr1:228291486-228291536	GM06990	blood:	n/a
9	chr1:228291177-228291227	HPAEpiC	pulmonary alveolar:	n/a
10	chr1:228290868-228290918	RPTEC	kidney:	n/a
11	chr1:228291177-228291227	NH-A	brain:	n/a
12	chr1:228291175-228291225	ProgFib	skin:	n/a
13	chr1:228290868-228290918	HPAEpiC	pulmonary alveolar:	n/a
14	chr1:228291175-228291225	GM12891	blood:	n/a
15	chr1:228291668-228291718	HPAEpiC	pulmonary alveolar:	n/a
16	chr1:228291177-228291227	NHBE	bronchial:	n/a
17	chr1:228291705-228291755	Hela-S3	cervix:	n/a
18	chr1:228290868-228290918	HMEC	breast:	n/a
19	chr1:228290868-228290918	AG04449	skin:	fetal
20	chr1:228291591-228291641	NT2-D1	testis:	n/a
21	chr1:228291682-228291732	RPTEC	kidney:	n/a
22	chr1:228291177-228291227	HEK293	kidney:	embryo
23	chr1:228291118-228291168	PFSK-1	brain:	n/a
24	chr1:228290333-228290383	H1-hESC	embryonic stem cell:	embryo
25	chr1:228290290-228290340	HEK293	kidney:	embryo
26	chr1:228291177-228291227	AG09309	skin:	n/a
27	chr1:228290140-228290190	Hela-S3	cervix:	n/a
28	chr1:228291668-228291718	H1-hESC	embryonic stem cell:	embryo
29	chr1:228291668-228291718	SAEC	small airway:	n/a
30	chr1:228291591-228291641	SAEC	small airway:	n/a
31	chr1:228290333-228290383	SKMC	muscle:	n/a
32	chr1:228291668-228291718	PANC-1	pancreas:	n/a
33	chr1:228291668-228291718	T-47D	breast:	n/a
34	chr1:228291175-228291225	NT2-D1	testis:	n/a
35	chr1:228290290-228290340	HL-60	blood:	n/a
36	chr1:228291682-228291732	SK-N-MC	brain:	n/a
37	chr1:228289747-228289797	NH-A	brain:	n/a
38	chr1:228291486-228291536	RPTEC	kidney:	n/a
39	chr1:228291175-228291225	NH-A	brain:	n/a
40	chr1:228291682-228291732	HCPEpiC	choroid plexus:	n/a
41	chr1:228290333-228290383	Jurkat	blood:	n/a
42	chr1:228290868-228290918	GM19239	blood:	n/a
43	chr1:228291668-228291718	K562	blood:	n/a
44	chr1:228291175-228291225	MCF-7	breast:	n/a
45	chr1:228291705-228291755	Jurkat	blood:	n/a
46	chr1:228290140-228290190	HepG2	liver:	n/a
47	chr1:228290333-228290383	NT2-D1	testis:	n/a
48	chr1:228291177-228291227	SK-N-SH_RA	brain:	n/a
49	chr1:228290140-228290190	MCF-7	breast:	n/a
50	chr1:228290868-228290918	ProgFib	skin:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:227921116..227923050-chr1:228289460..228292114,2	MCF-7	breast:
2	chr1:227915693..227918216-chr1:228290174..228292173,2	MCF-7	breast:
3	chr1:228186659..228187602-chr1:228289825..228290605,2	MCF-7	breast:
4	chr1:228290240..228293064-chr1:228675062..228676582,2	K562	blood:
5	chr1:228290240..228294197-chr1:228325970..228329742,3	MCF-7	breast:
6	chr1:228289454..228291459-chr1:228353037..228354863,4	MCF-7	breast:
7	chr1:228289424..228292369-chr1:228333748..228336393,2	MCF-7	breast:
8	chr1:228284520..228292111-chr1:228324853..228335412,14	K562	blood:
9	chr1:228288459..228290327-chr1:228338206..228340411,2	K562	blood:
10	chr1:228290480..228291365-chr12:52400534..52401246,2	NB4	blood:
11	chr1:228192133..228194243-chr1:228287809..228289393,2	K562	blood:
12	chr1:228288384..228298705-chr1:228351640..228357240,26	K562	blood:
13	chr1:228290161..228291112-chr1:228353017..228354235,3	K562	blood:
14	chr1:228286712..228292079-chr1:228327501..228330420,5	MCF-7	breast:
15	chr1:228290061..228293195-chr1:228643504..228645569,3	K562	blood:
16	chr1:228288649..228293430-chr1:228325997..228329591,7	K562	blood:
17	chr1:228289703..228291795-chr1:228462279..228463838,2	K562	blood:
18	chr1:228291320..228293457-chr1:228336716..228339227,2	K562	blood:
19	chr1:228288054..228293498-chr1:228351743..228355627,9	K562	blood:
20	chr1:228289288..228292230-chr1:228352223..228354730,2	MCF-7	breast:
21	chr1:228289389..228292049-chr1:228333496..228335357,2	K562	blood:
22	chr1:228186714..228188137-chr1:228289568..228290450,5	MCF-7	breast:
23	chr1:228291284..228293085-chr1:228340318..228343029,2	K562	blood:

No data

Variant related genes	Relation type
C1orf35	TF binding region
C1orf35	CpG island
ENSG00000198835	chromatin interactions
ENSG00000161835	chromatin interactions
ENSG00000081692	chromatin interactions
ENSG00000168159	chromatin interactions
ENSG00000181873	chromatin interactions
ENSG00000203684	chromatin interactions
ENSG00000143740	chromatin interactions
ENSG00000269934	chromatin interactions
ENSG00000181218	chromatin interactions
ENSG00000143774	chromatin interactions

Extended variants
information (count: 124 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:124 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs372982182	chr1:228289406-228289407	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs568551407	chr1:228289407-228289408	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs561897613	chr1:228289422-228289423	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs575428626	chr1:228289460-228289461	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
5	rs544442888	chr1:228289473-228289474	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
6	rs564608711	chr1:228289488-228289489	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
7	rs539414015	chr1:228289521-228289522	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
8	rs375129856	chr1:228289525-228289526	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
9	rs375937859	chr1:228289536-228289537	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
10	rs545453526	chr1:228289597-228289598	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
11	rs377719881	chr1:228289598-228289599	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs564052413	chr1:228289605-228289606	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs548304092	chr1:228289637-228289638	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs184270757	chr1:228289646-228289647	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
15	rs530711131	chr1:228289647-228289648	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs187987054	chr1:228289650-228289651	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs570628641	chr1:228289673-228289674	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs539733055	chr1:228289674-228289675	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs553048285	chr1:228289694-228289695	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs192414159	chr1:228289697-228289698	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs367573467	chr1:228289756-228289757	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs371322063	chr1:228289770-228289771	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs535500617	chr1:228289771-228289772	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs373337967	chr1:228289806-228289807	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs1128456	chr1:228289843-228289844	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs202176716	chr1:228289861-228289862	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs368709965	chr1:228289870-228289871	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs373634959	chr1:228289872-228289873	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs372383894	chr1:228289882-228289883	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs558352129	chr1:228289893-228289894	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs578158660	chr1:228289924-228289925	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs540925037	chr1:228289933-228289934	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs2295995	chr1:228289976-228289977	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs528084635	chr1:228289996-228289997	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
35	rs369194534	chr1:228290025-228290026	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
36	rs61825155	chr1:228290033-228290034	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs145743393	chr1:228290051-228290052	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs373950653	chr1:228290054-228290055	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs376871646	chr1:228290114-228290115	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
40	rs530647448	chr1:228290127-228290128	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
41	rs550471447	chr1:228290172-228290173	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs570632683	chr1:228290192-228290193	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs368673303	chr1:228290201-228290202	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs184854491	chr1:228290213-228290214	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs377443672	chr1:228290223-228290224	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs371201234	chr1:228290256-228290257	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
47	rs566468092	chr1:228290272-228290273	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
48	rs373623617	chr1:228290287-228290288	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
49	rs201723208	chr1:228290299-228290300	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
50	rs555368495	chr1:228290325-228290326	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Mental retardation	19951919	CNVD
Non-syndromic sensorineural hearing loss	17873649	CNVD
Basal cell lymphoma	17053054	CNVD
Autism	14699429	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Fumarase deficiency	21572526	CNVD
Autism	17483303	CNVD
Kartagener syndrome	16639409	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
Myelofibrosis	22110671	CNVD
abnormal development	18461090	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Lung adenocarcinoma	21935476	CNVD

Chromatin state (count:655 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:228276800-228290200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr1:228277200-228290000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr1:228278000-228289400	Genic enhancers	Pancreas	Pancrea
4	chr1:228280800-228289600	Weak transcription	Small Intestine	intestine
5	chr1:228283400-228289400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr1:228283400-228289400	Strong transcription	Sigmoid Colon	Sigmoid Colon
7	chr1:228283800-228289600	Strong transcription	Brain Cingulate Gyrus	brain
8	chr1:228284000-228289400	Strong transcription	Brain Hippocampus Middle	brain
9	chr1:228284200-228289400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
10	chr1:228284200-228289600	Genic enhancers	Fetal Muscle Trunk	muscle
11	chr1:228284400-228289400	Strong transcription	Fetal Brain Female	brain
12	chr1:228284400-228289400	Strong transcription	Ovary	ovary
13	chr1:228284600-228289400	Strong transcription	Brain Inferior Temporal Lobe	brain
14	chr1:228286600-228289400	Weak transcription	Pancreatic Islets	Pancreatic Islet
15	chr1:228287200-228289400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr1:228287200-228289400	Weak transcription	Stomach Mucosa	stomach
17	chr1:228287400-228289400	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr1:228287600-228289400	Weak transcription	Psoas Muscle	Psoas
19	chr1:228287800-228289400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr1:228287800-228289400	Genic enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr1:228287800-228289400	Weak transcription	Right Atrium	heart
22	chr1:228287800-228289400	Weak transcription	HUVEC	blood vessel
23	chr1:228287800-228290000	Weak transcription	Fetal Kidney	kidney
24	chr1:228288000-228289400	Weak transcription	A549	lung
25	chr1:228288000-228290200	Weak transcription	Brain Substantia Nigra	brain
26	chr1:228288200-228289400	Weak transcription	Esophagus	oesophagus
27	chr1:228288200-228289600	Weak transcription	Aorta	Aorta
28	chr1:228288200-228289600	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
29	chr1:228288200-228290000	Weak transcription	Left Ventricle	heart
30	chr1:228288600-228289400	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr1:228288600-228289400	Genic enhancers	Fetal Intestine Large	intestine
32	chr1:228288600-228289600	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr1:228288600-228289600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr1:228288600-228289600	Genic enhancers	Skeletal Muscle Female	skeletal muscle
35	chr1:228288600-228289600	Genic enhancers	Stomach Smooth Muscle	stomach
36	chr1:228288600-228289800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr1:228288600-228289800	Genic enhancers	Right Ventricle	heart
38	chr1:228288600-228290400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
39	chr1:228288800-228289400	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr1:228288800-228289400	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr1:228288800-228289400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
42	chr1:228288800-228289400	Enhancers	Primary monocytes fromperipheralblood	blood
43	chr1:228288800-228289400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
44	chr1:228288800-228289400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
45	chr1:228288800-228289400	Enhancers	Primary T helper cells fromperipheralblood	blood
46	chr1:228288800-228289400	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr1:228288800-228289400	Genic enhancers	NHLF	lung
48	chr1:228288800-228289400	Weak transcription	Osteobl	bone
49	chr1:228288800-228289600	Enhancers	Primary B cells from cord blood	blood
50	chr1:228288800-228289600	Genic enhancers	Brain Dorsolateral Prefrontal Cortex	brain

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