Variant report

Variant	esv3426810
Chromosome Location	chr19:23827976-23828342
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 39 )

Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs555178025	chr19:23828033-23828034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs573380351	chr19:23828041-23828042	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs12982090	chr19:23828055-23828056	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs113903873	chr19:23828057-23828058	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs577574593	chr19:23828063-23828064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs12980325	chr19:23828115-23828116	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs563993001	chr19:23828129-23828130	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs12980344	chr19:23828130-23828131	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs543226451	chr19:23828156-23828157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs575027055	chr19:23828225-23828226	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs34180554	chr19:23828249-23828250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs377493166	chr19:23828254-23828255	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs186677199	chr19:23828261-23828262	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs546791747	chr19:23828267-23828268	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs565238678	chr19:23828268-23828269	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs202063924	chr19:23828284-23828285	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs532424735	chr19:23828296-23828297	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs370889335	chr19:23828302-23828303	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs12981012	chr19:23828308-23828309	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs12981435	chr19:23828317-23828318	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs12980803	chr19:23828321-23828322	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs548764854	chr19:23828331-23828332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:39)

Disease	PMID	Source
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:23828000-23838800	Weak transcription	Stomach Mucosa	stomach

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