Variant report
Variant | esv3431291 |
---|---|
Chromosome Location | chr8:21016272-21019470 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:21015073..21016879-chr8:21019625..21021848,2 | K562 | blood: |
No data |
No data |
No data |
No data |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs534394664 | chr8:21016322-21016323 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs564323743 | chr8:21016325-21016326 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs148318623 | chr8:21016326-21016327 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs550258220 | chr8:21016328-21016329 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs562203312 | chr8:21016331-21016332 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs374912684 | chr8:21016338-21016339 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs10283354 | chr8:21016340-21016341 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
8 | rs548139965 | chr8:21016341-21016342 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs566667368 | chr8:21016346-21016347 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs534077107 | chr8:21016363-21016364 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs566434654 | chr8:21016386-21016387 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs116030824 | chr8:21016511-21016512 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs150824640 | chr8:21016530-21016531 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs556707689 | chr8:21016536-21016537 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs574942732 | chr8:21016573-21016574 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs183718143 | chr8:21016580-21016581 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs188195888 | chr8:21016608-21016609 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs572685837 | chr8:21016634-21016635 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs193128482 | chr8:21016660-21016661 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs547797168 | chr8:21016690-21016691 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs557976749 | chr8:21016716-21016717 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs185707926 | chr8:21016759-21016760 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs144475856 | chr8:21016768-21016769 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs562263722 | chr8:21016835-21016836 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs60344297 | chr8:21016853-21016854 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs529759951 | chr8:21016856-21016857 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs376855104 | chr8:21016858-21016859 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs397953864 | chr8:21016859-21016860 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs541493483 | chr8:21016860-21016861 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs560069911 | chr8:21016863-21016864 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs527633534 | chr8:21016866-21016867 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs552488086 | chr8:21016867-21016868 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs570716313 | chr8:21016868-21016869 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs531540709 | chr8:21016876-21016877 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs559501845 | chr8:21016891-21016892 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs55692361 | chr8:21016900-21016901 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs187821697 | chr8:21016902-21016903 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs71513815 | chr8:21016903-21016904 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
39 | rs376593885 | chr8:21016944-21016945 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs553907232 | chr8:21016945-21016946 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs147435606 | chr8:21016980-21016981 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs539786031 | chr8:21016988-21016989 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs576839812 | chr8:21016989-21016990 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs558032091 | chr8:21017027-21017028 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs576300459 | chr8:21017032-21017033 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs543623683 | chr8:21017063-21017064 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs2242178 | chr8:21017111-21017112 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs556326227 | chr8:21017112-21017113 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs536450188 | chr8:21017144-21017145 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs369850945 | chr8:21017147-21017148 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Multiple myeloma | 16616336 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Heart disease | 21282601 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Prostate cancer | 16573809 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Colorectal cancer | 21297112 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Prostate cancer | 21965145 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Breast cancer | 16608533 | CNVD |
Seminomas | 18059402 | CNVD |
Lung cancer | 18438408 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Immune disease | 21572526 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Kallmann Syndrome 2 | 22470819 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Epilepsy | 22083797 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Prostate cancer | 16461572 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Bladder cancer | 21909424 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Developmental delay | 21373258 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Breast cancer | 21364760 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Cancer | 18840272 | CNVD |
Breast cancer | 19602461 | CNVD |
Osteosarcoma | 19286668 | CNVD |
Prostate cancer | 19242612 | CNVD |
Prostate cancer | 19258508 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Gastric adenocarcinoma | 19115996 | CNVD |
Colorectal cancer | 19455253 | CNVD |
Melanoma | 20688739 | CNVD |
Esophageal adenocarcinoma | 19417022 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:21016200-21017600 | Enhancers | Fetal Brain Male | brain |
2 | chr8:21016400-21016800 | Enhancers | Fetal Brain Female | brain |
3 | chr8:21017600-21021600 | Weak transcription | Fetal Brain Male | brain |