Variant report

Variant	esv3432097
Chromosome Location	chr14:84657649-84659947
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 97 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:97 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs563503568	chr14:84658208-84658209	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs530709238	chr14:84658210-84658211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs545820830	chr14:84658221-84658222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs564404063	chr14:84658260-84658261	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs116660788	chr14:84658314-84658315	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs547730634	chr14:84658317-84658318	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs11847445	chr14:84658345-84658346	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs11847464	chr14:84658382-84658383	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs528125239	chr14:84658390-84658391	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs372265446	chr14:84658401-84658402	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs376743827	chr14:84658490-84658491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs4398044	chr14:84658495-84658496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs113279196	chr14:84658536-84658537	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs537646895	chr14:84658539-84658540	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs558987560	chr14:84658559-84658560	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs190548089	chr14:84658567-84658568	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs184038413	chr14:84658599-84658600	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs75336424	chr14:84658693-84658694	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs76471083	chr14:84658696-84658697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs78543089	chr14:84658706-84658707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs369749143	chr14:84658708-84658709	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs573053946	chr14:84658710-84658711	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs372745553	chr14:84658718-84658719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs374800854	chr14:84658719-84658720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs368935471	chr14:84658720-84658721	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs372959533	chr14:84658721-84658722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs79640197	chr14:84658722-84658723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs374969970	chr14:84658726-84658727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs369319071	chr14:84658729-84658730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs373203349	chr14:84658731-84658732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs5810170	chr14:84658732-84658733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs11847549	chr14:84658740-84658741	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs8021540	chr14:84658742-84658743	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs8020217	chr14:84658743-84658744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs189011523	chr14:84658744-84658745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs12896452	chr14:84658748-84658749	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs377280721	chr14:84658752-84658753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs371194194	chr14:84658759-84658760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs374379346	chr14:84658766-84658767	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs201948376	chr14:84658767-84658768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs377468623	chr14:84658768-84658769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs4016075	chr14:84658769-84658770	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs370256696	chr14:84658771-84658772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs4016076	chr14:84658772-84658773	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs372413069	chr14:84658780-84658781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs375957773	chr14:84658781-84658782	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs370030981	chr14:84658782-84658783	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs552904152	chr14:84658801-84658802	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs574463135	chr14:84658962-84658963	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs571293963	chr14:84658980-84658981	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16774939	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Neuroblastoma	18923191	CNVD
Barrett''s syndrome	19417022	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	17053054	CNVD
cataract	16735990	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16608533	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
Breast cancer	17603634	CNVD
Glioblastoma	21080181	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	20164920	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84658200-84660000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links