Variant report

Variant	esv3435194
Chromosome Location	chr3:42543398-42545496
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:304)
CpG islands
(count:734)
Chromatin interactive
region (count:6)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:304 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr3:42543670-42544060	H1-hESC	embryonic stem cell:	n/a	n/a
2	ATF3	chr3:42543232-42543433	K562	blood:	n/a	n/a
3	BACH1	chr3:42543207-42544084	H1-hESC	embryonic stem cell:	n/a	n/a
4	BHLHE40	chr3:42543250-42543741	K562	blood:	n/a	chr3:42543286-42543302
5	CCNT2	chr3:42543048-42543664	K562	blood:	n/a	n/a
6	CCNT2	chr3:42543936-42544338	K562	blood:	n/a	chr3:42544085-42544094 chr3:42543993-42544002
7	CEBPB	chr3:42543757-42544087	H1-hESC	embryonic stem cell:	n/a	n/a
8	CHD2	chr3:42543870-42544191	K562	blood:	n/a	n/a
9	CHD2	chr3:42543362-42543402	K562	blood:	n/a	n/a
10	CHD2	chr3:42543845-42544207	H1-hESC	embryonic stem cell:	n/a	n/a
11	CREB1	chr3:42543637-42544293	HepG2	liver:	n/a	n/a
12	CREB1	chr3:42543958-42544211	A549	lung:	n/a	n/a
13	CTBP2	chr3:42542581-42544333	H1-hESC	embryonic stem cell:	n/a	n/a
14	CTCF	chr3:42543200-42543476	GM12878	blood:	n/a	n/a
15	CTCF	chr3:42543640-42543790	HMEC	breast:	n/a	n/a
16	CTCF	chr3:42543217-42543433	GM10248	blood:	n/a	n/a
17	CTCF	chr3:42544078-42544178	MCF-7	breast:	n/a	n/a
18	CTCF	chr3:42543179-42543486	GM12891	blood:	n/a	n/a
19	CTCF	chr3:42543280-42543430	HPAF	blood vessel:	n/a	n/a
20	CTCF	chr3:42543300-42543450	HCM	heart:	n/a	n/a
21	CTCF	chr3:42543626-42543632	Kidney_OC	kidney:	n/a	n/a
22	CTCF	chr3:42543280-42543430	HMF	breast:	n/a	n/a
23	CTCF	chr3:42543260-42543410	NHEK	skin:	n/a	n/a
24	CTCF	chr3:42543199-42543471	Lung_OC	lung:	n/a	n/a
25	CTCF	chr3:42543195-42543468	Fibrobl	skin:	n/a	n/a
26	CTCF	chr3:42543139-42543534	T-47D	breast:	n/a	n/a
27	CTCF	chr3:42543260-42543410	HFF-Myc	foreskin:	n/a	n/a
28	CTCF	chr3:42543260-42543410	HRE	kidney:	n/a	n/a
29	CTCF	chr3:42543280-42543430	HFF	foreskin:	n/a	n/a
30	CTCF	chr3:42543199-42543437	Kidney_OC	kidney:	n/a	n/a
31	CTCF	chr3:42543764-42543977	K562	blood:	n/a	n/a
32	CTCF	chr3:42543260-42543410	NHDF-neo	bronchial:	n/a	n/a
33	CTCF	chr3:42543360-42543510	AG04450	lung:	n/a	n/a
34	CTCF	chr3:42543168-42543480	Spleen_OC	spleen:	n/a	n/a
35	CTCF	chr3:42544120-42544270	HepG2	liver:	n/a	n/a
36	CTCF	chr3:42543260-42543410	HPF	lung:	n/a	n/a
37	CTCF	chr3:42543215-42543466	ProgFib	skin:	n/a	n/a
38	CTCF	chr3:42543239-42543432	Gliobla	brain:	n/a	n/a
39	CTCF	chr3:42543092-42543498	K562	blood:	n/a	n/a
40	CTCF	chr3:42543300-42543450	GM12873	blood:	n/a	n/a
41	CTCF	chr3:42543280-42543430	GM12874	blood:	n/a	n/a
42	CTCF	chr3:42543260-42543410	SK-N-SH_RA	brain:	n/a	n/a
43	CTCF	chr3:42543239-42543430	Medullo	brain:	n/a	n/a
44	CTCF	chr3:42543260-42543410	GM12867	blood:	n/a	n/a
45	CTCF	chr3:42543280-42543430	AoAF	blood vessel:	n/a	n/a
46	CTCF	chr3:42543260-42543410	GM12874	blood:	n/a	n/a
47	CTCF	chr3:42543239-42543402	GM20000	blood:	n/a	n/a
48	CTCF	chr3:42543300-42543450	A549	lung:	n/a	n/a
49	CTCF	chr3:42543260-42543410	WERI-Rb-1	eye:	n/a	n/a
50	CTCF	chr3:42543260-42543410	SAEC	small airway:	n/a	n/a

(count:734 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:42543933-42543983	LNCaP	prostate:	n/a
2	chr3:42544082-42544132	HL-60	blood:	n/a
3	chr3:42543933-42543983	LNCaP	prostate:	n/a
4	chr3:42544082-42544132	HL-60	blood:	n/a
5	chr3:42544067-42544117	ECC-1	luminal epithelium:	n/a
6	chr3:42543566-42543616	PFSK-1	brain:	n/a
7	chr3:42544082-42544132	HCPEpiC	choroid plexus:	n/a
8	chr3:42543469-42543519	NHDF-neo	bronchial:	n/a
9	chr3:42543469-42543519	SK-N-SH	brain:	n/a
10	chr3:42544400-42544450	NHDF-neo	bronchial:	n/a
11	chr3:42544618-42544668	Caco-2	colon:	n/a
12	chr3:42544067-42544117	HEK293	kidney:	embryo
13	chr3:42544101-42544151	PANC-1	pancreas:	n/a
14	chr3:42544082-42544132	AG04449	skin:	fetal
15	chr3:42543530-42543580	NT2-D1	testis:	n/a
16	chr3:42543933-42543983	HIPEpiC	eye:	n/a
17	chr3:42543469-42543519	HRCEpiC	kidney:	n/a
18	chr3:42544060-42544110	SAEC	small airway:	n/a
19	chr3:42544020-42544070	CMK	blood:	n/a
20	chr3:42544400-42544450	NT2-D1	testis:	n/a
21	chr3:42544400-42544450	NB4	blood:	n/a
22	chr3:42543566-42543616	HRPEpiC	eye:	n/a
23	chr3:42543566-42543616	GM12891	blood:	n/a
24	chr3:42544060-42544110	HRE	kidney:	n/a
25	chr3:42544101-42544151	HRPEpiC	eye:	n/a
26	chr3:42543566-42543616	Jurkat	blood:	n/a
27	chr3:42544618-42544668	IMR90	lung:	fetal
28	chr3:42544067-42544117	SK-N-SH	brain:	n/a
29	chr3:42543530-42543580	ECC-1	luminal epithelium:	n/a
30	chr3:42543566-42543616	MCF10A-Er-Src	breast:	n/a
31	chr3:42543469-42543519	HIPEpiC	eye:	n/a
32	chr3:42543530-42543580	Jurkat	blood:	n/a
33	chr3:42544060-42544110	ovcar-3	ovarian:	n/a
34	chr3:42544067-42544117	HepG2	liver:	n/a
35	chr3:42544060-42544110	NHBE	bronchial:	n/a
36	chr3:42544067-42544117	NT2-D1	testis:	n/a
37	chr3:42544400-42544450	HepG2	liver:	n/a
38	chr3:42544060-42544110	H1-hESC	embryonic stem cell:	embryo
39	chr3:42544067-42544117	HEEpiC	esophagus:	n/a
40	chr3:42543469-42543519	HPAEpiC	pulmonary alveolar:	n/a
41	chr3:42544131-42544181	PrEC	prostate:	n/a
42	chr3:42544067-42544117	HPAEpiC	pulmonary alveolar:	n/a
43	chr3:42544082-42544132	HCF	heart:	n/a
44	chr3:42543530-42543580	AG10803	skin:	n/a
45	chr3:42544020-42544070	HEK293	kidney:	embryo
46	chr3:42543530-42543580	AoSMC	blood vessel:	n/a
47	chr3:42543933-42543983	HRE	kidney:	n/a
48	chr3:42544060-42544110	MCF-7	breast:	n/a
49	chr3:42544067-42544117	CMK	blood:	n/a
50	chr3:42544067-42544117	NHBE	bronchial:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:42542597..42545270-chr3:42568668..42571142,2	K562	blood:
2	chr3:42530093..42535343-chr3:42545492..42550064,6	MCF-7	breast:
3	chr3:42200703..42202768-chr3:42543945..42545454,2	MCF-7	breast:
4	chr3:42518552..42520973-chr3:42544499..42546784,2	MCF-7	breast:
5	chr3:42543941..42547920-chr3:42554474..42558044,4	K562	blood:
6	chr3:42529189..42533440-chr3:42542111..42547805,7	MCF-7	breast:

No data

Variant related genes	Relation type
VIPR1	TF binding region
VIPR1	CpG island
ENSG00000182606	chromatin interactions
ENSG00000114812	chromatin interactions

Extended variants
information (count: 76 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:76 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376503918	chr3:42543425-42543426	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs368047919	chr3:42543456-42543457	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs73082655	chr3:42543495-42543496	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs549299923	chr3:42543531-42543532	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs570925015	chr3:42543533-42543534	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs566010697	chr3:42543548-42543549	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs373028467	chr3:42543595-42543596	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs34863434	chr3:42543645-42543646	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs534933574	chr3:42543657-42543658	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs557918918	chr3:42543713-42543714	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs138958944	chr3:42543773-42543774	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs188640794	chr3:42543816-42543817	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs368616533	chr3:42543837-42543838	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs116970328	chr3:42543868-42543869	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs556936386	chr3:42543909-42543910	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs573591749	chr3:42543917-42543918	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs116551466	chr3:42543923-42543924	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs553353170	chr3:42543943-42543944	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs573169032	chr3:42543962-42543963	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs545233068	chr3:42543966-42543967	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs565026856	chr3:42543989-42543990	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs556062853	chr3:42543992-42543993	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs190835822	chr3:42544011-42544012	Bivalent/Poised TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs527949035	chr3:42544116-42544117	Bivalent/Poised TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs543516778	chr3:42544141-42544142	Bivalent/Poised TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs371174986	chr3:42544232-42544233	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs563785977	chr3:42544319-42544320	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs529298769	chr3:42544323-42544324	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs548962550	chr3:42544353-42544354	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs559657095	chr3:42544386-42544387	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs376180580	chr3:42544400-42544401	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs528717313	chr3:42544409-42544410	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs377752938	chr3:42544418-42544419	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs143248653	chr3:42544438-42544439	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs182295612	chr3:42544441-42544442	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs112487062	chr3:42544492-42544493	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs550434629	chr3:42544569-42544570	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs567354540	chr3:42544592-42544593	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs535912137	chr3:42544602-42544603	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs77466630	chr3:42544624-42544625	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs573177634	chr3:42544682-42544683	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs141473146	chr3:42544704-42544705	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs11712896	chr3:42544719-42544720	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs575382686	chr3:42544760-42544761	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs115980430	chr3:42544775-42544776	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs374863041	chr3:42544834-42544835	Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs547661097	chr3:42544836-42544837	Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs574070522	chr3:42544837-42544838	Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs150861423	chr3:42544850-42544851	Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs559273559	chr3:42544872-42544873	Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Neuroblastoma	18923191	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Wilms tumour	17204608	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-small cell lung cancer	21829676	CNVD
Kartagener syndrome	16639409	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Breast cancer	21509527	CNVD
Melanoma	21693616	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Breast cancer	20409316	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Breast cancer	21364760	CNVD
abnormal development	18461090	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:396 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:42542000-42544800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
2	chr3:42542200-42545200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
3	chr3:42542400-42543400	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
4	chr3:42542400-42543400	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
5	chr3:42542400-42544600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
6	chr3:42542600-42543600	Bivalent Enhancer	Placenta Amnion	Placenta Amnion
7	chr3:42542600-42544000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
8	chr3:42542600-42544200	Flanking Bivalent TSS/Enh	Adipose Nuclei	Adipose
9	chr3:42542600-42544200	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
10	chr3:42542600-42544400	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr3:42542600-42544800	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
12	chr3:42542600-42545000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
13	chr3:42542600-42545200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
14	chr3:42542600-42545200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
15	chr3:42542800-42543400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr3:42542800-42543400	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
17	chr3:42542800-42543400	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
18	chr3:42542800-42543400	Transcr. at gene 5' and 3'	Right Atrium	heart
19	chr3:42542800-42543400	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
20	chr3:42542800-42543600	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
21	chr3:42542800-42543600	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 31	rectum
22	chr3:42542800-42543600	Bivalent/Poised TSS	HSMMtube	muscle
23	chr3:42542800-42543800	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr3:42542800-42543800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
25	chr3:42542800-42543800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr3:42542800-42543800	Flanking Bivalent TSS/Enh	Fetal Intestine Large	intestine
27	chr3:42542800-42544000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
28	chr3:42542800-42544000	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
29	chr3:42542800-42544000	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
30	chr3:42542800-42544000	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 29	rectum
31	chr3:42542800-42544200	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
32	chr3:42542800-42544200	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
33	chr3:42542800-42544600	Flanking Active TSS	Primary hematopoietic stem cells	blood
34	chr3:42542800-42544800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr3:42543000-42543400	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr3:42543000-42543400	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
37	chr3:42543000-42543400	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
38	chr3:42543000-42543400	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
39	chr3:42543000-42543400	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
40	chr3:42543000-42543400	Enhancers	Liver	Liver
41	chr3:42543000-42543400	Flanking Bivalent TSS/Enh	Brain Dorsolateral Prefrontal Cortex	brain
42	chr3:42543000-42543400	Flanking Bivalent TSS/Enh	Brain Substantia Nigra	brain
43	chr3:42543000-42543400	Bivalent Enhancer	Psoas Muscle	Psoas
44	chr3:42543000-42543400	Flanking Active TSS	Right Ventricle	heart
45	chr3:42543000-42543600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
46	chr3:42543000-42543800	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr3:42543000-42543800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
48	chr3:42543000-42543800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
49	chr3:42543000-42543800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr3:42543000-42543800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood

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