No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs569727649 |
chr1:228401183-228401184 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs373759154 |
chr1:228401205-228401206 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs368823490 |
chr1:228401221-228401222 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs372423540 |
chr1:228401224-228401225 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs375552745 |
chr1:228401244-228401245 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs368219464 |
chr1:228401262-228401263 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs552489989 |
chr1:228401265-228401266 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs565988095 |
chr1:228401287-228401288 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs534969020 |
chr1:228401292-228401293 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs372465829 |
chr1:228401313-228401314 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs377725925 |
chr1:228401328-228401329 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs185717159 |
chr1:228401329-228401330 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs369341013 |
chr1:228401350-228401351 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs201231167 |
chr1:228401352-228401353 |
Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs369113665 |
chr1:228401417-228401418 |
Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs577357081 |
chr1:228401443-228401444 |
Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs539656738 |
chr1:228401450-228401451 |
Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs553206774 |
chr1:228401470-228401471 |
Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs573225139 |
chr1:228401534-228401535 |
Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs3121190 |
chr1:228401556-228401557 |
Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|