Variant report

Variant esv3436965
Chromosome Location chr18:12420352-12421500
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:319 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12410400-12430400 Weak transcription A549 lung
2 chr18:12418200-12430400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr18:12419600-12420400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr18:12419600-12420600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr18:12419600-12420800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr18:12419600-12421000 Active TSS Brain Hippocampus Middle brain
7 chr18:12419600-12421000 Active TSS Fetal Brain Female brain
8 chr18:12419800-12420400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
9 chr18:12419800-12420400 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
10 chr18:12419800-12420400 Flanking Active TSS Primary hematopoietic stem cells blood
11 chr18:12419800-12420400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
12 chr18:12419800-12420400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr18:12419800-12420400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr18:12419800-12420400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
15 chr18:12419800-12420400 Flanking Active TSS Brain Germinal Matrix brain
16 chr18:12419800-12420400 Flanking Active TSS Colonic Mucosa Colon
17 chr18:12419800-12420400 Active TSS Fetal Kidney kidney
18 chr18:12419800-12420400 Flanking Active TSS Fetal Muscle Trunk muscle
19 chr18:12419800-12420400 Flanking Active TSS Placenta Placenta
20 chr18:12419800-12420400 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
21 chr18:12419800-12420400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
22 chr18:12419800-12420600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr18:12419800-12420600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr18:12419800-12420600 Flanking Active TSS Primary B cells from peripheral blood blood
25 chr18:12419800-12420600 Active TSS Primary T cells from cord blood blood
26 chr18:12419800-12420600 Active TSS Primary T helper naive cells fromperipheralblood blood
27 chr18:12419800-12420600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
28 chr18:12419800-12420600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
29 chr18:12419800-12420600 Active TSS Colon Smooth Muscle Colon
30 chr18:12419800-12420600 Active TSS Duodenum Mucosa Duodenum
31 chr18:12419800-12420600 Active TSS Fetal Lung lung
32 chr18:12419800-12420600 Active TSS Rectal Mucosa Donor 29 rectum
33 chr18:12419800-12420600 Active TSS Rectal Mucosa Donor 31 rectum
34 chr18:12419800-12420600 Active TSS Hela-S3 cervix
35 chr18:12419800-12420600 Active TSS NHDF-Ad bronchial
36 chr18:12419800-12420600 Active TSS NHLF lung
37 chr18:12419800-12420800 Active TSS Fetal Intestine Large intestine
38 chr18:12419800-12420800 Active TSS Fetal Stomach stomach
39 chr18:12419800-12420800 Active TSS Fetal Thymus thymus
40 chr18:12419800-12420800 Active TSS Right Ventricle heart
41 chr18:12419800-12421000 Active TSS H1 Cell Line embryonic stem cell
42 chr18:12419800-12421000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr18:12419800-12421000 Active TSS Cortex derived primary cultured neurospheres brain
44 chr18:12419800-12421000 Active TSS Brain Anterior Caudate brain
45 chr18:12419800-12421000 Active TSS Brain Inferior Temporal Lobe brain
46 chr18:12419800-12421000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
47 chr18:12419800-12421000 Active TSS Brain Substantia Nigra brain
48 chr18:12419800-12421000 Active TSS Duodenum Smooth Muscle Duodenum
49 chr18:12419800-12421000 Active TSS Pancreatic Islets Pancreatic Islet
50 chr18:12419800-12421000 Active TSS Ovary ovary

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