Variant report

Variant	esv3437524
Chromosome Location	chr11:106792992-106794040
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs188882114	chr11:106793062-106793063	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs113850856	chr11:106793081-106793082	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs72990360	chr11:106793122-106793123	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs373264580	chr11:106793133-106793134	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs11211974	chr11:106793157-106793158	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs112265802	chr11:106793170-106793171	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs569950070	chr11:106793186-106793187	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs571183359	chr11:106793204-106793205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs527337571	chr11:106793213-106793214	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs5005146	chr11:106793226-106793227	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs35961634	chr11:106793259-106793260	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs186245875	chr11:106793298-106793299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs570479351	chr11:106793352-106793353	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs12807382	chr11:106793366-106793367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs12807393	chr11:106793381-106793382	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs72135714	chr11:106793389-106793390	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs373110353	chr11:106793407-106793408	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs6144495	chr11:106793409-106793410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs200986705	chr11:106793422-106793423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs60295207	chr11:106793423-106793424	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs371115446	chr11:106793424-106793425	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs11211975	chr11:106793471-106793472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs370720326	chr11:106793542-106793543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs191015187	chr11:106793555-106793556	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs552794758	chr11:106793576-106793577	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs563577081	chr11:106793633-106793634	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs565999991	chr11:106793652-106793653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs535659459	chr11:106793679-106793680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs536937880	chr11:106793685-106793686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs73553855	chr11:106793694-106793695	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs113282814	chr11:106793747-106793748	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs546108781	chr11:106793762-106793763	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs185879836	chr11:106793763-106793764	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs567597550	chr11:106793767-106793768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs536437309	chr11:106793776-106793777	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs556361619	chr11:106793785-106793786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs540672581	chr11:106793809-106793810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs191128921	chr11:106793826-106793827	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs541019744	chr11:106793833-106793834	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs574113077	chr11:106793885-106793886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs182794887	chr11:106793996-106793997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs569885187	chr11:106794018-106794019	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mantle cell lymphoma	19029149	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Obesity	19966786	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106786200-106806800	Weak transcription	Fetal Lung	lung
2	chr11:106792400-106793000	Enhancers	NHDF-Ad	bronchial
3	chr11:106792600-106795600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:106793000-106796400	Weak transcription	NHDF-Ad	bronchial

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