Variant report

Variant	esv3437812
Chromosome Location	chr7:58034410-58038808
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 605 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:605 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs113316379	chr7:58034422-58034423	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs546674349	chr7:58034423-58034424	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs571349508	chr7:58034429-58034430	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs538643815	chr7:58034436-58034437	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs369277151	chr7:58034441-58034442	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs569541892	chr7:58034451-58034452	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs62459496	chr7:58034463-58034464	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs555164416	chr7:58034464-58034465	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs573450387	chr7:58034465-58034466	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs528686989	chr7:58034485-58034486	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs138168168	chr7:58034487-58034488	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs201512955	chr7:58034494-58034495	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs368864648	chr7:58034503-58034504	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs572415253	chr7:58034506-58034507	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs530027485	chr7:58034509-58034510	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs541736324	chr7:58034546-58034547	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs560330886	chr7:58034547-58034548	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs527475928	chr7:58034548-58034549	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs76099605	chr7:58034564-58034565	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs77988579	chr7:58034619-58034620	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs376357278	chr7:58034621-58034622	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs550968615	chr7:58034628-58034629	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs569128475	chr7:58034656-58034657	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs113470981	chr7:58034673-58034674	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs112456850	chr7:58034690-58034691	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs111277965	chr7:58034699-58034700	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs202023559	chr7:58034700-58034701	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs536978499	chr7:58034709-58034710	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs112886703	chr7:58034713-58034714	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs111481245	chr7:58034717-58034718	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs548583323	chr7:58034725-58034726	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs201277262	chr7:58034733-58034734	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs112342547	chr7:58034741-58034742	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs202167115	chr7:58034750-58034751	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs200158258	chr7:58034764-58034765	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs371120709	chr7:58034773-58034774	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs146562257	chr7:58034789-58034790	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs142941165	chr7:58034790-58034791	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs370109943	chr7:58034791-58034792	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs534714461	chr7:58034793-58034794	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs200424331	chr7:58034800-58034801	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs559156061	chr7:58034805-58034806	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs113930972	chr7:58034818-58034819	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs201451643	chr7:58034819-58034820	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs554697915	chr7:58034827-58034828	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs577031081	chr7:58034834-58034835	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs199616818	chr7:58034840-58034841	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs200929364	chr7:58034844-58034845	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs537518396	chr7:58034854-58034855	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs556152779	chr7:58034858-58034859	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Wilms tumour	21544195	CNVD
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Biliary cancer	19435499	CNVD
Cancer	21183584	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Hepatocellular carcinoma	16750200	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Hodgkin''s lymphoma	18641027	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	21399695	CNVD
head and neck squamous cell carcinoma	17671120	CNVD

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:58026400-58036600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
2	chr7:58026400-58042800	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
3	chr7:58026400-58043000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr7:58032200-58038400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
5	chr7:58032400-58043000	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
6	chr7:58035200-58037000	ZNF genes & repeats	Liver	Liver
7	chr7:58037000-58039400	ZNF genes & repeats	Primary T cells from cord blood	blood
8	chr7:58037800-58040000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
9	chr7:58038800-58039200	Active TSS	Aorta	Aorta
10	chr7:58038800-58040000	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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