Variant report

Variant	esv3438354
Chromosome Location	chr15:100105454-100108002
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:673)
CpG islands
(count:489)
Chromatin interactive
region (count:14)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:673 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:100106163-100106281	K562	blood:	n/a	n/a
2	ARID3A	chr15:100105938-100106299	HepG2	liver:	n/a	n/a
3	ATF2	chr15:100105740-100106370	GM12878	blood:	n/a	n/a
4	ATF2	chr15:100105760-100106400	GM12878	blood:	n/a	n/a
5	ATF2	chr15:100105899-100106345	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr15:100105908-100106300	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr15:100105751-100106371	A549	lung:	n/a	n/a
8	ATF3	chr15:100105700-100106330	A549	lung:	n/a	n/a
9	BACH1	chr15:100105866-100105975	K562	blood:	n/a	n/a
10	BACH1	chr15:100106829-100107069	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr15:100105686-100106353	H1-hESC	embryonic stem cell:	n/a	n/a
12	BATF	chr15:100105949-100106265	GM12878	blood:	n/a	n/a
13	BCL11A	chr15:100105880-100106281	GM12878	blood:	n/a	chr15:100106080-100106093 chr15:100106104-100106113 chr15:100106264-100106277
14	BCL3	chr15:100105647-100106376	A549	lung:	n/a	chr15:100106080-100106093 chr15:100106104-100106113 chr15:100106318-100106331 chr15:100106264-100106277
15	BCLAF1	chr15:100106781-100107242	GM12878	blood:	n/a	n/a
16	BCLAF1	chr15:100107359-100107988	GM12878	blood:	n/a	n/a
17	BCLAF1	chr15:100104685-100106419	GM12878	blood:	n/a	chr15:100106080-100106093 chr15:100106104-100106113 chr15:100106318-100106331 chr15:100106264-100106277
18	BCLAF1	chr15:100105925-100106362	GM12878	blood:	n/a	chr15:100106080-100106093 chr15:100106104-100106113 chr15:100106318-100106331 chr15:100106264-100106277
19	BHLHE40	chr15:100106808-100107490	K562	blood:	n/a	chr15:100107015-100107031
20	BHLHE40	chr15:100105924-100106353	HepG2	liver:	n/a	chr15:100106231-100106247 chr15:100106283-100106299
21	BHLHE40	chr15:100104828-100106388	GM12878	blood:	n/a	chr15:100106231-100106247 chr15:100106283-100106299
22	BHLHE40	chr15:100104985-100106409	K562	blood:	n/a	chr15:100106231-100106247 chr15:100106283-100106299
23	BRCA1	chr15:100105900-100106247	H1-hESC	embryonic stem cell:	n/a	n/a
24	BRCA1	chr15:100105815-100106240	GM12878	blood:	n/a	n/a
25	BRCA1	chr15:100105845-100106300	Hela-S3	cervix:	n/a	n/a
26	BRCA1	chr15:100105744-100106218	HepG2	liver:	n/a	n/a
27	BRCA1	chr15:100106955-100107141	GM12878	blood:	n/a	n/a
28	CBX3	chr15:100105913-100106446	K562	blood:	n/a	n/a
29	CBX3	chr15:100105904-100106208	K562	blood:	n/a	n/a
30	CCNT2	chr15:100105061-100106462	K562	blood:	n/a	chr15:100106392-100106401
31	CEBPB	chr15:100105826-100106344	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr15:100105982-100106284	H1-hESC	embryonic stem cell:	n/a	n/a
33	CEBPB	chr15:100104989-100105537	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr15:100105693-100106293	GM12878	blood:	n/a	n/a
35	CEBPB	chr15:100104935-100105553	MCF-7	breast:	n/a	n/a
36	CEBPB	chr15:100105906-100106106	K562	blood:	n/a	n/a
37	CEBPD	chr15:100105939-100106348	HepG2	liver:	n/a	n/a
38	CHD1	chr15:100105172-100105471	GM12878	blood:	n/a	chr15:100105377-100105387
39	CHD1	chr15:100105758-100106330	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD1	chr15:100105690-100106481	GM12878	blood:	n/a	n/a
41	CHD1	chr15:100106704-100107985	GM12878	blood:	n/a	n/a
42	CHD1	chr15:100105106-100108685	IMR90	lung:	n/a	chr15:100105377-100105387
43	CHD1	chr15:100106875-100107146	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD2	chr15:100105694-100106419	HepG2	liver:	n/a	n/a
45	CHD2	chr15:100105762-100106387	H1-hESC	embryonic stem cell:	n/a	n/a
46	CHD2	chr15:100105710-100106404	K562	blood:	n/a	n/a
47	CHD2	chr15:100104889-100106409	GM12878	blood:	n/a	chr15:100105377-100105387
48	CHD2	chr15:100106776-100107124	GM12878	blood:	n/a	n/a
49	CHD2	chr15:100106786-100106815	HepG2	liver:	n/a	n/a
50	CHD2	chr15:100105001-100107174	Hela-S3	cervix:	n/a	chr15:100105377-100105387

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:100105709-100105759	Jurkat	blood:	n/a
2	chr15:100105709-100105759	Jurkat	blood:	n/a
3	chr15:100106860-100106910	PFSK-1	brain:	n/a
4	chr15:100107064-100107114	LNCaP	prostate:	n/a
5	chr15:100105709-100105759	IMR90	lung:	fetal
6	chr15:100106860-100106910	IMR90	lung:	fetal
7	chr15:100107064-100107114	PFSK-1	brain:	n/a
8	chr15:100106207-100106257	GM12878	blood:	n/a
9	chr15:100107129-100107179	AG04450	lung:	fetal
10	chr15:100106860-100106910	NHDF-neo	bronchial:	n/a
11	chr15:100107129-100107179	A549	lung:	n/a
12	chr15:100106179-100106229	HPAEpiC	pulmonary alveolar:	n/a
13	chr15:100105896-100105946	HepG2	liver:	n/a
14	chr15:100107064-100107114	SK-N-SH	brain:	n/a
15	chr15:100106207-100106257	NT2-D1	testis:	n/a
16	chr15:100106179-100106229	NHBE	bronchial:	n/a
17	chr15:100105896-100105946	CMK	blood:	n/a
18	chr15:100107129-100107179	HCF	heart:	n/a
19	chr15:100106179-100106229	HEEpiC	esophagus:	n/a
20	chr15:100106860-100106910	SK-N-SH_RA	brain:	n/a
21	chr15:100105709-100105759	NT2-D1	testis:	n/a
22	chr15:100106125-100106175	HCM	heart:	n/a
23	chr15:100107129-100107179	Caco-2	colon:	n/a
24	chr15:100106125-100106175	PFSK-1	brain:	n/a
25	chr15:100105709-100105759	H1-hESC	embryonic stem cell:	embryo
26	chr15:100106860-100106910	SKMC	muscle:	n/a
27	chr15:100106179-100106229	GM06990	blood:	n/a
28	chr15:100106860-100106910	AG04449	skin:	fetal
29	chr15:100106179-100106229	PANC-1	pancreas:	n/a
30	chr15:100106207-100106257	SK-N-SH	brain:	n/a
31	chr15:100106125-100106175	AoSMC	blood vessel:	n/a
32	chr15:100105896-100105946	SAEC	small airway:	n/a
33	chr15:100105896-100105946	Jurkat	blood:	n/a
34	chr15:100106125-100106175	GM12891	blood:	n/a
35	chr15:100106179-100106229	SK-N-MC	brain:	n/a
36	chr15:100106207-100106257	MCF-7	breast:	n/a
37	chr15:100107064-100107114	HPAEpiC	pulmonary alveolar:	n/a
38	chr15:100107064-100107114	T-47D	breast:	n/a
39	chr15:100105709-100105759	MCF10A-Er-Src	breast:	n/a
40	chr15:100106179-100106229	LNCaP	prostate:	n/a
41	chr15:100106860-100106910	NHBE	bronchial:	n/a
42	chr15:100106179-100106229	SK-N-SH_RA	brain:	n/a
43	chr15:100106125-100106175	HIPEpiC	eye:	n/a
44	chr15:100106179-100106229	HAEpiC	amniotic membrane:	n/a
45	chr15:100105896-100105946	HCPEpiC	choroid plexus:	n/a
46	chr15:100106179-100106229	HCF	heart:	n/a
47	chr15:100106125-100106175	AG04449	skin:	fetal
48	chr15:100105709-100105759	HCF	heart:	n/a
49	chr15:100105896-100105946	GM19239	blood:	n/a
50	chr15:100105709-100105759	SK-N-SH	brain:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:100107066..100107566-chr3:72496095..72496628,2	HCT-116	colon:
2	chr15:100106105..100106617-chr8:117778724..117779225,2	HCT-116	colon:
3	chr15:100105670..100107207-chr15:100272767..100275061,2	MCF-7	breast:
4	chr15:100036529..100040308-chr15:100103797..100106516,3	MCF-7	breast:
5	chr15:100105316..100107211-chr15:100246606..100248832,2	MCF-7	breast:
6	chr15:100106039..100106558-chr19:39322403..39322903,2	NB4	blood:
7	chr15:100105492..100106141-chr6:88299353..88300156,2	NB4	blood:
8	chr15:100104936..100107605-chr15:100221549..100224496,2	MCF-7	breast:
9	chr15:100104091..100109623-chr15:100241901..100248412,10	MCF-7	breast:
10	chr15:100107133..100109166-chr15:100272746..100274556,2	MCF-7	breast:
11	chr15:100104323..100106476-chr15:100107864..100110052,2	K562	blood:
12	chr15:100104819..100107629-chr15:100257615..100260464,2	MCF-7	breast:
13	chr15:99826876..99828722-chr15:100104864..100106375,2	MCF-7	breast:
14	chr15:99900193..99901836-chr15:100106225..100109193,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTD-2054N24.2.1-7	chr15:100106258-100106309	NONHSAT050876
2	lnc-CTD-2054N24.2.1-7	chr15:100106133-100106309	NONHSAT050874

No data

Variant related genes	Relation type
MEF2A	TF binding region
MEF2A	CpG island
ENSG00000068305	chromatin interactions
ENSG00000147679	chromatin interactions
ENSG00000201724	chromatin interactions
ENSG00000183060	chromatin interactions
ENSG00000214397	chromatin interactions
ENSG00000135336	chromatin interactions
ENSG00000168904	chromatin interactions
ENSG00000147677	chromatin interactions
ENSG00000269810	chromatin interactions
ENSG00000104823	chromatin interactions
ENSG00000146282	chromatin interactions

Extended variants
information (count: 100 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:100 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs372570736	chr15:100105478-100105479	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs79036059	chr15:100105487-100105488	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs532305571	chr15:100105505-100105506	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
4	rs369918483	chr15:100105516-100105517	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
5	rs111999921	chr15:100105553-100105554	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	mRNA abundance
6	rs535857525	chr15:100105554-100105555	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
7	rs554542409	chr15:100105574-100105575	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
8	rs111721605	chr15:100105582-100105583	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
9	rs565205958	chr15:100105690-100105691	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
10	rs569698014	chr15:100105819-100105820	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
11	rs537127968	chr15:100105825-100105826	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
12	rs558921511	chr15:100105840-100105841	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
13	rs377218236	chr15:100105859-100105860	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
14	rs577530435	chr15:100105891-100105892	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
15	rs541608582	chr15:100105892-100105893	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
16	rs149502611	chr15:100105911-100105912	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
17	rs575145669	chr15:100105937-100105938	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
18	rs541897734	chr15:100105988-100105989	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
19	rs144294303	chr15:100106014-100106015	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
20	rs148314466	chr15:100106021-100106022	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
21	rs546261065	chr15:100106033-100106034	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
22	rs564204398	chr15:100106037-100106038	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
23	rs369250480	chr15:100106069-100106070	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
24	rs532180918	chr15:100106071-100106072	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
25	rs181625093	chr15:100106093-100106094	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
26	rs559265672	chr15:100106100-100106101	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
27	rs530001049	chr15:100106102-100106103	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
28	rs12915602	chr15:100106110-100106111	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
29	rs547906344	chr15:100106121-100106122	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
30	rs569618689	chr15:100106142-100106143	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
31	rs536610616	chr15:100106155-100106156	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
32	rs552323731	chr15:100106180-100106181	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
33	rs547797211	chr15:100106195-100106196	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
34	rs535240545	chr15:100106199-100106200	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
35	rs553595669	chr15:100106208-100106209	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
36	rs575258085	chr15:100106220-100106221	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
37	rs559963447	chr15:100106237-100106238	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
38	rs557108474	chr15:100106275-100106276	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
39	rs575609556	chr15:100106301-100106302	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
40	rs545847762	chr15:100106360-100106361	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
41	rs564252129	chr15:100106365-100106366	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
42	rs12900449	chr15:100106380-100106381	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
43	rs184287924	chr15:100106385-100106386	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
44	rs544264100	chr15:100106386-100106387	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
45	rs12900450	chr15:100106389-100106390	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
46	rs12900453	chr15:100106392-100106393	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
47	rs559100824	chr15:100106463-100106464	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
48	rs113874541	chr15:100106548-100106549	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
49	rs4421955	chr15:100106646-100106647	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs12900882	chr15:100106694-100106695	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Sudden cardiac death	19188705	CNVD
Intellectual disability	22102821	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Developmental delay	21147756	CNVD
Hepatocellular carcinoma	16750200	CNVD
Central neurocytomas	17123091	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17133270	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	20811773	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	20409316	CNVD
Emphysema	19352772	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Breast cancer	17142309	CNVD
Schizophrenia	23813976	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Lung squamous cell carcinoma	20842114	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:300 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:100103600-100105600	Enhancers	Spleen	Spleen
2	chr15:100104200-100105600	Flanking Active TSS	Stomach Smooth Muscle	stomach
3	chr15:100104600-100105600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr15:100104600-100105600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr15:100105000-100105600	Enhancers	NHDF-Ad	bronchial
6	chr15:100105000-100106200	Flanking Active TSS	Primary hematopoietic stem cells	blood
7	chr15:100105000-100107000	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr15:100105000-100107200	Active TSS	iPS-18 Cell Line	embryonic stem cell
9	chr15:100105000-100107400	Active TSS	HUES64 Cell Line	embryonic stem cell
10	chr15:100105000-100107600	Active TSS	H9 Cell Line	embryonic stem cell
11	chr15:100105000-100107600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr15:100105000-100107800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr15:100105000-100108200	Active TSS	HUES6 Cell Line	embryonic stem cell
14	chr15:100105000-100108400	Active TSS	Pancreatic Islets	Pancreatic Islet
15	chr15:100105000-100108800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr15:100105200-100105600	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
17	chr15:100105200-100105600	Enhancers	Fetal Heart	heart
18	chr15:100105200-100105600	Flanking Active TSS	HMEC	breast
19	chr15:100105200-100105800	Weak transcription	Fetal Lung	lung
20	chr15:100105200-100107200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
21	chr15:100105200-100107200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr15:100105200-100107200	Active TSS	Primary T killer memory cells from peripheral blood	blood
23	chr15:100105200-100107200	Bivalent/Poised TSS	HepG2	liver
24	chr15:100105200-100107200	Active TSS	Osteobl	bone
25	chr15:100105200-100107400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr15:100105200-100107400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr15:100105200-100107400	Active TSS	iPS-20b Cell Line	embryonic stem cell
28	chr15:100105200-100107400	Active TSS	Fetal Brain Female	brain
29	chr15:100105200-100107400	Active TSS	Gastric	stomach
30	chr15:100105200-100107600	Active TSS	HUES48 Cell Line	embryonic stem cell
31	chr15:100105200-100107600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr15:100105200-100107600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr15:100105200-100107600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr15:100105200-100107600	Active TSS	Brain Angular Gyrus	brain
35	chr15:100105200-100107600	Active TSS	Fetal Kidney	kidney
36	chr15:100105200-100107800	Active TSS	ES-I3 Cell Line	embryonic stem cell
37	chr15:100105200-100107800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr15:100105200-100107800	Active TSS	Fetal Intestine Large	intestine
39	chr15:100105200-100107800	Active TSS	Ovary	ovary
40	chr15:100105200-100108000	Active TSS	Duodenum Smooth Muscle	Duodenum
41	chr15:100105200-100108000	Active TSS	HSMM	muscle
42	chr15:100105200-100108200	Active TSS	H1 Cell Line	embryonic stem cell
43	chr15:100105200-100108200	Active TSS	iPS-15b Cell Line	embryonic stem cell
44	chr15:100105200-100108200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr15:100105200-100108200	Active TSS	HSMMtube	muscle
46	chr15:100105200-100108400	Active TSS	Breast Myoepithelial Primary Cells	Breast
47	chr15:100105200-100109400	Active TSS	Right Atrium	heart
48	chr15:100105400-100105800	Active TSS	Primary B cells from cord blood	blood
49	chr15:100105400-100105800	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
50	chr15:100105400-100105800	Active TSS	Primary T regulatory cells fromperipheralblood	blood

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