Variant report

Variant	esv3439671
Chromosome Location	chr17:19649881-19650091
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BCL3	chr17:19647775-19653407	A549	lung:	n/a	chr17:19652977-19652986 chr17:19650882-19650891 chr17:19650661-19650670 chr17:19652047-19652060
2	BCL3	chr17:19649776-19650181	GM12878	blood:	n/a	n/a
3	BCL3	chr17:19649731-19650246	GM12878	blood:	n/a	n/a
4	BCL3	chr17:19649497-19652317	A549	lung:	n/a	chr17:19650882-19650891 chr17:19650661-19650670 chr17:19652047-19652060
5	CEBPB	chr17:19649751-19650446	A549	lung:	n/a	chr17:19650157-19650170
6	CEBPB	chr17:19649967-19650290	A549	lung:	n/a	chr17:19650157-19650170
7	CREB1	chr17:19649881-19650151	A549	lung:	n/a	n/a
8	CTCF	chr17:19649945-19650012	MCF-7	breast:	n/a	n/a
9	CTCF	chr17:19649977-19650035	GM12891	blood:	n/a	n/a
10	CTCF	chr17:19647746-19653300	A549	lung:	n/a	chr17:19648889-19648902 chr17:19650591-19650599 chr17:19651387-19651397 chr17:19649367-19649376
11	CTCF	chr17:19649945-19650056	GM12892	blood:	n/a	n/a
12	CTCF	chr17:19649942-19650009	H1-hESC	embryonic stem cell:	n/a	n/a
13	CTCF	chr17:19649962-19650027	MCF-7	breast:	n/a	n/a
14	CTCF	chr17:19649970-19650063	NHEK	skin:	n/a	n/a
15	CTCF	chr17:19649948-19649969	NHEK	skin:	n/a	n/a
16	CTCF	chr17:19649909-19650072	GM19239	blood:	n/a	n/a
17	ELF1	chr17:19649892-19652087	A549	lung:	n/a	chr17:19650152-19650163
18	EP300	chr17:19649666-19653003	A549	lung:	n/a	chr17:19650306-19650322 chr17:19651055-19651065 chr17:19651868-19651878 chr17:19652732-19652741 chr17:19651785-19651795
19	EP300	chr17:19649474-19652949	A549	lung:	n/a	chr17:19650306-19650322 chr17:19651055-19651065 chr17:19651868-19651878 chr17:19652732-19652741 chr17:19651785-19651795
20	ETS1	chr17:19649689-19650232	A549	lung:	n/a	n/a
21	FOSL2	chr17:19649743-19650198	A549	lung:	n/a	n/a
22	FOSL2	chr17:19648208-19652390	A549	lung:	n/a	chr17:19652091-19652103 chr17:19648607-19648618 chr17:19652089-19652100
23	GATA3	chr17:19648106-19652992	A549	lung:	n/a	chr17:19650936-19650945 chr17:19649206-19649217
24	JUND	chr17:19649759-19650851	A549	lung:	n/a	n/a
25	JUND	chr17:19649752-19652440	A549	lung:	n/a	chr17:19652091-19652103 chr17:19652089-19652100
26	MAX	chr17:19648056-19653846	A549	lung:	n/a	chr17:19651879-19651888 chr17:19648221-19648230 chr17:19648968-19648984
27	MYC	chr17:19649957-19650022	MCF-7	breast:	n/a	n/a
28	MYC	chr17:19649877-19650127	MCF-7	breast:	n/a	n/a
29	MYC	chr17:19649923-19650064	MCF-7	breast:	n/a	n/a
30	NFATC1	chr17:19649720-19650270	GM12878	blood:	n/a	n/a
31	NFATC1	chr17:19649803-19650287	GM12878	blood:	n/a	n/a
32	PAX5	chr17:19649888-19650115	GM12878	blood:	n/a	n/a
33	PBX3	chr17:19649827-19650134	GM12878	blood:	n/a	n/a
34	POLR2A	chr17:19649810-19650160	GM12892	blood:	n/a	n/a
35	POLR2A	chr17:19649834-19650184	A549	lung:	n/a	n/a
36	POLR2A	chr17:19649812-19650162	MCF-7	breast:	n/a	n/a
37	POLR2A	chr17:19647758-19651715	A549	lung:	n/a	n/a
38	POLR2A	chr17:19649899-19650088	MCF-7	breast:	n/a	n/a
39	POLR2A	chr17:19649543-19652557	A549	lung:	n/a	n/a
40	POLR2A	chr17:19649642-19650394	A549	lung:	n/a	n/a
41	POLR2A	chr17:19649769-19649964	Hela-S3	cervix:	n/a	n/a
42	POLR2A	chr17:19649824-19650186	A549	lung:	n/a	n/a
43	POLR2A	chr17:19649840-19650175	A549	lung:	n/a	n/a
44	POU2F2	chr17:19649828-19650181	GM12891	blood:	n/a	n/a
45	POU2F2	chr17:19649930-19650078	GM12878	blood:	n/a	n/a
46	REST	chr17:19649899-19650377	A549	lung:	n/a	n/a
47	REST	chr17:19649555-19652980	A549	lung:	n/a	chr17:19650573-19650591 chr17:19652049-19652062 chr17:19652019-19652029
48	SIN3AK20	chr17:19649529-19650288	A549	lung:	n/a	n/a
49	SP1	chr17:19648113-19653000	A549	lung:	n/a	chr17:19652977-19652986 chr17:19650262-19650269 chr17:19648213-19648225 chr17:19648215-19648224 chr17:19650286-19650300 chr17:19652976-19652985 chr17:19648214-19648223 chr17:19648209-19648223 chr17:19652975-19652987 chr17:19648214-19648224 chr17:19648492-19648506 chr17:19648223-19648233 chr17:19648213-19648225 chr17:19648214-19648228
50	SP1	chr17:19648147-19652905	A549	lung:	n/a	chr17:19650262-19650269 chr17:19648213-19648225 chr17:19648215-19648224 chr17:19650286-19650300 chr17:19648214-19648223 chr17:19648209-19648223 chr17:19648214-19648224 chr17:19648492-19648506 chr17:19648223-19648233 chr17:19648213-19648225 chr17:19648214-19648228

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr17:19650069-19650119	MCF-7	breast:	n/a
2	chr17:19650069-19650119	Hepatocyte	liver:	n/a
3	chr17:19650069-19650119	LNCaP	prostate:	n/a
4	chr17:19650069-19650119	H1-hESC	embryonic stem cell:	embryo
5	chr17:19650069-19650119	ProgFib	skin:	n/a
6	chr17:19650069-19650119	PrEC	prostate:	n/a
7	chr17:19650069-19650119	SKMC	muscle:	n/a
8	chr17:19650069-19650119	RPTEC	kidney:	n/a
9	chr17:19650069-19650119	AG09319	gingival:	n/a
10	chr17:19650069-19650119	HNPCEpiC	eye:	n/a
11	chr17:19650069-19650119	AG04449	skin:	fetal
12	chr17:19650069-19650119	AG04450	lung:	fetal
13	chr17:19650069-19650119	Caco-2	colon:	n/a
14	chr17:19650069-19650119	HUVEC	blood vessel:	n/a
15	chr17:19650069-19650119	NT2-D1	testis:	n/a
16	chr17:19650069-19650119	MCF10A-Er-Src	breast:	n/a
17	chr17:19650069-19650119	GM12892	blood:	n/a
18	chr17:19650069-19650119	SAEC	small airway:	n/a
19	chr17:19650069-19650119	BE2_C	brain:	n/a
20	chr17:19650069-19650119	SK-N-SH	brain:	n/a
21	chr17:19650069-19650119	IMR90	lung:	fetal
22	chr17:19650069-19650119	CMK	blood:	n/a
23	chr17:19650069-19650119	PFSK-1	brain:	n/a
24	chr17:19650069-19650119	A549	lung:	n/a
25	chr17:19650069-19650119	GM19239	blood:	n/a
26	chr17:19650069-19650119	HPAEpiC	pulmonary alveolar:	n/a
27	chr17:19650069-19650119	AG10803	skin:	n/a
28	chr17:19650069-19650119	HRPEpiC	eye:	n/a
29	chr17:19650069-19650119	AoSMC	blood vessel:	n/a
30	chr17:19650069-19650119	U87	brain:	n/a
31	chr17:19650069-19650119	BJ	skin:	n/a
32	chr17:19650069-19650119	GM06990	blood:	n/a
33	chr17:19650069-19650119	GM12891	blood:	n/a
34	chr17:19650069-19650119	HRE	kidney:	n/a
35	chr17:19650069-19650119	HIPEpiC	eye:	n/a
36	chr17:19650069-19650119	HL-60	blood:	n/a
37	chr17:19650069-19650119	SK-N-MC	brain:	n/a
38	chr17:19650069-19650119	T-47D	breast:	n/a
39	chr17:19650069-19650119	NHDF-neo	bronchial:	n/a
40	chr17:19650069-19650119	HEEpiC	esophagus:	n/a
41	chr17:19650069-19650119	NHBE	bronchial:	n/a
42	chr17:19650069-19650119	AG09309	skin:	n/a
43	chr17:19650069-19650119	ECC-1	luminal epithelium:	n/a
44	chr17:19650069-19650119	HCF	heart:	n/a
45	chr17:19650069-19650119	Jurkat	blood:	n/a
46	chr17:19650069-19650119	HMEC	breast:	n/a
47	chr17:19650069-19650119	ovcar-3	ovarian:	n/a
48	chr17:19650069-19650119	HCT-116	colon:	n/a
49	chr17:19650069-19650119	K562	blood:	n/a
50	chr17:19650069-19650119	HepG2	liver:	n/a

No.	Distal block	Cell Line	Cell type
1	chr17:19649191..19653636-chr17:19654131..19659903,8	MCF-7	breast:
2	chr11:67372115..67374476-chr17:19649917..19652325,2	MCF-7	breast:
3	chr11:67372621..67374795-chr17:19647401..19649907,2	MCF-7	breast:
4	chr17:19645239..19646933-chr17:19648650..19650817,2	MCF-7	breast:

Variant related genes	Relation type
ALDH3A1	TF binding region
ALDH3A1	CpG island
ENSG00000255119	chromatin interactions
ENSG00000108602	chromatin interactions
ENSG00000230607	chromatin interactions
ENSG00000184224	chromatin interactions
ENSG00000167792	chromatin interactions

Extended variants
information (count: 36 )
Associated
traits (count: 156 )

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs118186183	chr17:19649884-19649885	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs79422749	chr17:19649894-19649895	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs114473912	chr17:19649897-19649898	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs375495827	chr17:19649925-19649926	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs58134999	chr17:19649935-19649936	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
6	rs375726934	chr17:19649937-19649938	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs562569604	chr17:19649943-19649944	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs575714241	chr17:19649945-19649946	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs544669507	chr17:19649947-19649948	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs201285966	chr17:19649949-19649950	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs199682319	chr17:19649950-19649951	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs199785442	chr17:19649951-19649952	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs200576363	chr17:19649954-19649955	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs534981436	chr17:19649957-19649958	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs59787039	chr17:19649958-19649959	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs397940742	chr17:19649966-19649967	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs558074686	chr17:19649967-19649968	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs577605521	chr17:19649968-19649969	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs564661903	chr17:19649979-19649980	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs527248552	chr17:19649985-19649986	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs537008073	chr17:19649991-19649992	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs556937910	chr17:19649997-19649998	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs569295583	chr17:19649998-19649999	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs572001443	chr17:19650000-19650001	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs560832752	chr17:19650005-19650006	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs145315016	chr17:19650007-19650008	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs549534197	chr17:19650008-19650009	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs202006385	chr17:19650009-19650010	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs118106687	chr17:19650010-19650011	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs551851263	chr17:19650018-19650019	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs577939509	chr17:19650037-19650038	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs386796021	chr17:19650039-19650040	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs12939864	chr17:19650041-19650042	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs140318101	chr17:19650044-19650045	Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
35	rs191901361	chr17:19650084-19650085	Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
36	rs144161169	chr17:19650089-19650090	Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:156)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Wilms tumour	21544195	CNVD
Esophageal adenocarcinoma	18519675	CNVD
lymphocytic leukemia	21291569	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Chordoma	21602918	CNVD
Miller-Dieker syndrome	22283845	CNVD
Non-syndromic sensorineural hearing loss	17457615	CNVD
Cancer	22429812	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Ewing''s sarcoma	21437220	CNVD
Follicular lymphoma	19010834	CNVD
Colorectal cancer	20709793	CNVD
Acute myeloid leukemia	16864856	CNVD
Endometrial cancer	22040021	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Breast cancer	22028636	CNVD
Breast cancer	20837533	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
colon cancer	17210682	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Basal cell lymphoma	17053054	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Cancer	16751803	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Chronic lymphocytic leukemia	17971485	CNVD
Basal cell lymphoma	17170743	CNVD
Breast cancer	16461572	CNVD
Colorectal cancer	16272173	CNVD
Follicular lymphoma	17170743	CNVD
Human rectal carcinomas	16397240	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Ovarian cancer	22174824	CNVD
Moyamoya disease	22323933	CNVD
small cell lung cancer	20016488	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	21251322	CNVD
Myelodysplastic syndrome	21251322	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20724749	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Acute myeloid leukemia	17237825	CNVD
Colorectal cancer	21645411	CNVD
HIV/AIDS	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
HIV/AIDS	17953491	CNVD
HIV/AIDS	20877625	CNVD
Immune disease	21076436	CNVD
Rheumatoid arthritis	17953491	CNVD
Type 1 diabetes	17953491	CNVD
HIV/AIDS	15637236	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Ovarian cancer	21781307	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Neurofibromatosis	18196300	CNVD
Colorectal cancer	16774939	CNVD
Breast cancer	17001317	CNVD
Rhabdomyosarcoma	16790082	CNVD
Charcot-marie-tooth disease	16463004	CNVD
Osteosarcoma	22292074	CNVD
Breast cancer	17603634	CNVD
Charcot	16760730	CNVD
Mental retardation	17901693	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
ovarian endometriomas	16273235	CNVD
Smith-Magenis syndrome	18923513	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Austim spectrum disorder	21302340	CNVD
Autism	22492990	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	18414209	CNVD
Developmental delay	21549014	CNVD
Epilepsy	20970697	CNVD
Mental retardation	18414209	CNVD
Mental retardation	21549014	CNVD
Smith-Magenis syndrome	21981782	CNVD
Smith-Magenis syndrome	20188345	CNVD
Smith-Magenis syndrome	16775514	CNVD
Smith-Magenis syndrome	22585170	CNVD
Smith-Magenis syndrome	22241247	CNVD
Autism	20970697	CNVD
Mental retardation	19951919	CNVD
Potocki-Lupski syndrome	21271655	CNVD
Potocki-lupski syndrome	17357070	CNVD
Potocki-lupski syndrome	20110824	CNVD
Potocki-lupski syndrome	18923514	CNVD
Potocki-lupski syndrome	22241247	CNVD
Potocki-lupski syndrome	20188345	CNVD
Schizophrenia	21399695	CNVD
Mental retardation	16773131	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Charcot-marie-tooth disease	22470819	CNVD
Neurofibromatosis	22470819	CNVD
Neuropathy	22470819	CNVD
Smith-Magenis syndrome	18301319	CNVD
Smith-Magenis syndrome	17357070	CNVD
Smith-Magenis syndrome	18469339	CNVD
Smith-Magenis syndrome	22241097	CNVD
Smith-Magenis syndrome	22470819	CNVD
Tourette syndrome	18923514	CNVD
Type 1 diabetes	22470819	CNVD
Potocki-lupski syndrome	18469339	CNVD
Follicular lymphoma	20505157	CNVD
T-cell lymphomas	19863542	CNVD
Neuropathy	17597781	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	17015230	CNVD
Smith-Magenis syndrome	17597781	CNVD
Potocki-lupski syndrome	18059269	CNVD
Potocki-lupski syndrome	17597781	CNVD
Mental retardation	17847001	CNVD
Multiple myeloma	16616336	CNVD
Breast cancer	20409316	CNVD
Autism	22543975	CNVD
Sezary syndrome	18413736	CNVD
Cancer	20164920	CNVD
Lung adenocarcinoma	21935476	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:19645600-19650800	Weak transcription	Gastric	stomach
2	chr17:19648600-19651400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr17:19648600-19651600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr17:19648600-19651800	Weak transcription	HSMM	muscle
5	chr17:19648800-19650000	Weak transcription	Liver	Liver
6	chr17:19648800-19650000	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr17:19648800-19650600	Enhancers	Esophagus	oesophagus
8	chr17:19648800-19651200	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr17:19648800-19651200	Enhancers	HepG2	liver
10	chr17:19648800-19651400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr17:19648800-19652200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr17:19648800-19652600	Enhancers	Duodenum Mucosa	Duodenum
13	chr17:19648800-19654200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr17:19648800-19654200	Weak transcription	HUVEC	blood vessel
15	chr17:19648800-19656200	Weak transcription	Aorta	Aorta
16	chr17:19648800-19657000	Weak transcription	Spleen	Spleen
17	chr17:19649000-19651000	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr17:19649000-19651200	Weak transcription	Brain Cingulate Gyrus	brain
19	chr17:19649000-19651400	Weak transcription	Brain Anterior Caudate	brain
20	chr17:19649000-19651600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr17:19649000-19651600	Weak transcription	Pancreas	Pancrea
22	chr17:19649000-19652600	Enhancers	Rectal Mucosa Donor 31	rectum
23	chr17:19649000-19656400	Weak transcription	Right Atrium	heart
24	chr17:19649200-19651200	Weak transcription	Brain Hippocampus Middle	brain
25	chr17:19649200-19651200	Weak transcription	Brain Substantia Nigra	brain
26	chr17:19649200-19651400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr17:19649200-19651400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
28	chr17:19649200-19651400	Weak transcription	Stomach Smooth Muscle	stomach
29	chr17:19649200-19651600	Weak transcription	Adipose Nuclei	Adipose
30	chr17:19649200-19651600	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr17:19649200-19652600	Enhancers	Colonic Mucosa	Colon
32	chr17:19649200-19656200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
33	chr17:19649400-19650400	Flanking Active TSS	A549	lung
34	chr17:19649400-19650600	Weak transcription	Rectal Mucosa Donor 29	rectum
35	chr17:19649400-19650600	Weak transcription	HMEC	breast
36	chr17:19649400-19650800	Enhancers	Stomach Mucosa	stomach
37	chr17:19649400-19651000	Weak transcription	Cortex derived primary cultured neurospheres	brain
38	chr17:19649400-19651200	Weak transcription	Fetal Intestine Small	intestine
39	chr17:19649400-19651200	Weak transcription	NHEK	skin
40	chr17:19649400-19651400	Weak transcription	Brain Angular Gyrus	brain
41	chr17:19649400-19651600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr17:19649600-19650600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr17:19649600-19651000	Enhancers	Hela-S3	cervix
44	chr17:19649800-19650000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
45	chr17:19649800-19650200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
46	chr17:19649800-19652800	Weak transcription	GM12878-XiMat	blood
47	chr17:19650000-19650200	Enhancers	Sigmoid Colon	Sigmoid Colon
48	chr17:19650000-19650600	Enhancers	Liver	Liver
49	chr17:19650000-19651200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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