Variant report

Variant	esv3440757
Chromosome Location	chr4:56261420-56263968
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:661)
CpG islands
(count:427)
Chromatin interactive
region (count:21)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:661 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:56261773-56261945	K562	blood:	n/a	n/a
2	ARID3A	chr4:56261793-56262090	HepG2	liver:	n/a	n/a
3	ATF1	chr4:56261657-56262173	K562	blood:	n/a	n/a
4	ATF2	chr4:56261711-56262273	GM12878	blood:	n/a	n/a
5	BACH1	chr4:56261550-56261838	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr4:56261513-56261799	K562	blood:	n/a	n/a
7	BCLAF1	chr4:56261531-56263204	GM12878	blood:	n/a	chr4:56262243-56262252 chr4:56262272-56262281 chr4:56262246-56262255 chr4:56262343-56262356 chr4:56262244-56262257 chr4:56262098-56262111
8	BHLHE40	chr4:56261891-56262345	HepG2	liver:	n/a	n/a
9	BHLHE40	chr4:56261422-56262419	K562	blood:	n/a	n/a
10	BHLHE40	chr4:56261575-56262492	GM12878	blood:	n/a	n/a
11	BHLHE40	chr4:56262639-56262663	K562	blood:	n/a	n/a
12	BHLHE40	chr4:56262918-56263208	K562	blood:	n/a	n/a
13	BRCA1	chr4:56261940-56262233	HepG2	liver:	n/a	n/a
14	BRCA1	chr4:56261512-56262276	Hela-S3	cervix:	n/a	n/a
15	CBX3	chr4:56261511-56262261	K562	blood:	n/a	n/a
16	CCNT2	chr4:56261532-56263349	K562	blood:	n/a	chr4:56262663-56262672
17	CEBPB	chr4:56261542-56262211	Hela-S3	cervix:	n/a	n/a
18	CEBPD	chr4:56262002-56262309	HepG2	liver:	n/a	n/a
19	CHD1	chr4:56263668-56263855	H1-hESC	embryonic stem cell:	n/a	n/a
20	CHD1	chr4:56262099-56263245	H1-hESC	embryonic stem cell:	n/a	n/a
21	CHD1	chr4:56261060-56266047	IMR90	lung:	n/a	n/a
22	CHD1	chr4:56262004-56263392	GM12878	blood:	n/a	n/a
23	CHD2	chr4:56261606-56262866	GM12878	blood:	n/a	n/a
24	CHD2	chr4:56261487-56263292	Hela-S3	cervix:	n/a	n/a
25	CHD2	chr4:56261532-56262292	H1-hESC	embryonic stem cell:	n/a	n/a
26	CHD2	chr4:56262660-56262672	H1-hESC	embryonic stem cell:	n/a	n/a
27	CHD2	chr4:56261758-56262848	K562	blood:	n/a	n/a
28	CHD2	chr4:56261732-56262695	HepG2	liver:	n/a	n/a
29	CREB1	chr4:56261599-56262262	ECC-1	luminal epithelium:	n/a	chr4:56261747-56261760
30	CREB1	chr4:56261461-56262479	HepG2	liver:	n/a	chr4:56261747-56261760
31	CREB1	chr4:56261529-56262455	K562	blood:	n/a	chr4:56261747-56261760
32	CREB1	chr4:56261596-56262437	A549	lung:	n/a	chr4:56261747-56261760
33	CREB1	chr4:56261484-56262209	ECC-1	luminal epithelium:	n/a	chr4:56261747-56261760
34	CREB1	chr4:56261490-56262342	HepG2	liver:	n/a	chr4:56261747-56261760
35	CREB1	chr4:56261596-56262353	H1-hESC	embryonic stem cell:	n/a	chr4:56261747-56261760
36	CREB1	chr4:56261328-56262343	K562	blood:	n/a	chr4:56261747-56261760
37	CREB1	chr4:56261633-56262215	A549	lung:	n/a	chr4:56261747-56261760
38	CREB1	chr4:56261607-56262366	H1-hESC	embryonic stem cell:	n/a	chr4:56261747-56261760
39	CREB1	chr4:56261492-56262464	GM12878	blood:	n/a	chr4:56261747-56261760
40	CTBP2	chr4:56261485-56262771	H1-hESC	embryonic stem cell:	n/a	n/a
41	CTCF	chr4:56261580-56261730	HEK293	kidney:	n/a	n/a
42	CTCF	chr4:56261620-56261770	GM06990	blood:	n/a	n/a
43	CTCF	chr4:56261650-56261811	MCF-7	breast:	n/a	n/a
44	CTCF	chr4:56261641-56261756	NHEK	skin:	n/a	n/a
45	CTCF	chr4:56261560-56261710	HPAF	blood vessel:	n/a	n/a
46	CTCF	chr4:56261600-56261750	GM12873	blood:	n/a	n/a
47	CTCF	chr4:56261520-56261670	GM12873	blood:	n/a	n/a
48	CTCF	chr4:56261618-56261779	MCF-7	breast:	n/a	n/a
49	CTCF	chr4:56261545-56261807	Spleen_OC	spleen:	n/a	n/a
50	CTCF	chr4:56261500-56261650	HepG2	liver:	n/a	n/a

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:56262445-56262495	NHDF-neo	bronchial:	n/a
2	chr4:56262833-56262883	NB4	blood:	n/a
3	chr4:56261753-56261803	HEEpiC	esophagus:	n/a
4	chr4:56261765-56261815	GM12878	blood:	n/a
5	chr4:56262105-56262155	HAEpiC	amniotic membrane:	n/a
6	chr4:56261753-56261803	RPTEC	kidney:	n/a
7	chr4:56262105-56262155	ECC-1	luminal epithelium:	n/a
8	chr4:56262445-56262495	T-47D	breast:	n/a
9	chr4:56262105-56262155	Hepatocyte	liver:	n/a
10	chr4:56261765-56261815	AG04449	skin:	fetal
11	chr4:56261527-56261577	HRCEpiC	kidney:	n/a
12	chr4:56262445-56262495	K562	blood:	n/a
13	chr4:56262702-56262752	HCT-116	colon:	n/a
14	chr4:56262702-56262752	NH-A	brain:	n/a
15	chr4:56261527-56261577	GM19239	blood:	n/a
16	chr4:56262445-56262495	AG10803	skin:	n/a
17	chr4:56262833-56262883	SK-N-SH	brain:	n/a
18	chr4:56261765-56261815	RPTEC	kidney:	n/a
19	chr4:56261527-56261577	GM12891	blood:	n/a
20	chr4:56261527-56261577	ovcar-3	ovarian:	n/a
21	chr4:56262702-56262752	SAEC	small airway:	n/a
22	chr4:56262445-56262495	PrEC	prostate:	n/a
23	chr4:56262105-56262155	AG09319	gingival:	n/a
24	chr4:56262105-56262155	NHDF-neo	bronchial:	n/a
25	chr4:56262833-56262883	BE2_C	brain:	n/a
26	chr4:56261753-56261803	HRE	kidney:	n/a
27	chr4:56261753-56261803	HUVEC	blood vessel:	n/a
28	chr4:56262702-56262752	GM12892	blood:	n/a
29	chr4:56262105-56262155	NT2-D1	testis:	n/a
30	chr4:56262105-56262155	PrEC	prostate:	n/a
31	chr4:56261753-56261803	HepG2	liver:	n/a
32	chr4:56262105-56262155	GM12878	blood:	n/a
33	chr4:56262445-56262495	SK-N-MC	brain:	n/a
34	chr4:56262833-56262883	PrEC	prostate:	n/a
35	chr4:56262702-56262752	LNCaP	prostate:	n/a
36	chr4:56262445-56262495	SAEC	small airway:	n/a
37	chr4:56262105-56262155	ProgFib	skin:	n/a
38	chr4:56262445-56262495	HCF	heart:	n/a
39	chr4:56261765-56261815	Hela-S3	cervix:	n/a
40	chr4:56262702-56262752	HEEpiC	esophagus:	n/a
41	chr4:56262105-56262155	MCF-7	breast:	n/a
42	chr4:56262445-56262495	HCT-116	colon:	n/a
43	chr4:56262702-56262752	A549	lung:	n/a
44	chr4:56262445-56262495	HRPEpiC	eye:	n/a
45	chr4:56262833-56262883	MCF-7	breast:	n/a
46	chr4:56262833-56262883	HRE	kidney:	n/a
47	chr4:56262105-56262155	H1-hESC	embryonic stem cell:	embryo
48	chr4:56261765-56261815	AG09319	gingival:	n/a
49	chr4:56262833-56262883	T-47D	breast:	n/a
50	chr4:56261765-56261815	HUVEC	blood vessel:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr16:67313002..67313543-chr4:56261724..56262428,2	NB4	blood:
2	chr4:56211281..56215987-chr4:56257992..56268538,18	K562	blood:
3	chr4:56211148..56230966-chr4:56256626..56269458,54	MCF-7	breast:
4	chr3:150125609..150126516-chr4:56261520..56262416,2	HCT-116	colon:
5	chr4:56216631..56219493-chr4:56263836..56266245,2	K562	blood:
6	chr4:56247536..56249762-chr4:56263632..56266279,3	K562	blood:
7	chr4:56245537..56248832-chr4:56260791..56264132,6	MCF-7	breast:
8	chr4:56211096..56216124-chr4:56256262..56265067,20	K562	blood:
9	chr4:56261651..56266514-chr4:56267808..56271520,10	MCF-7	breast:
10	chr4:56262170..56264152-chr4:56264363..56265916,3	K562	blood:
11	chr2:43453212..43454058-chr4:56261845..56262526,2	NB4	blood:
12	chr4:56260988..56264413-chr4:56410743..56414640,3	K562	blood:
13	chr4:56216631..56219343-chr4:56262936..56265336,2	K562	blood:
14	chr4:56211242..56218739-chr4:56258356..56267013,28	MCF-7	breast:
15	chr19:3985082..3985890-chr4:56261509..56262195,2	Hela-S3	cervix:
16	chr4:56245158..56247160-chr4:56262133..56263862,2	K562	blood:
17	chr4:56248184..56250642-chr4:56260280..56262635,2	K562	blood:
18	chr18:56338349..56338859-chr4:56262021..56262530,2	HCT-116	colon:
19	chr4:56240281..56248484-chr4:56258541..56264383,10	MCF-7	breast:
20	chr4:56252554..56257772-chr4:56259709..56263846,8	MCF-7	breast:
21	chr4:56222050..56228109-chr4:56258616..56264786,10	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CLOCK-1	chr4:56261962-56261997	ENSG00000249700.4
2	lnc-CLOCK-1	chr4:56261962-56262009	ENSG00000249700.4
3	lnc-CLOCK-1	chr4:56261962-56262004	ENSG00000249700.4
4	lnc-CLOCK-1	chr4:56261962-56262009	ENSG00000249700.4
5	lnc-CLOCK-1	chr4:56261962-56262014	ENSG00000249700.4

No data

Variant related genes	Relation type
SRD5A3-AS1	TF binding region
TMEM165	TF binding region
SRD5A3-AS1	CpG island
TMEM165	CpG island
ENSG00000251111	chromatin interactions
ENSG00000167658	chromatin interactions
ENSG00000134852	chromatin interactions
ENSG00000128039	chromatin interactions
ENSG00000172175	chromatin interactions
ENSG00000134851	chromatin interactions
ENSG00000272969	chromatin interactions
ENSG00000152518	chromatin interactions
ENSG00000196155	chromatin interactions
ENSG00000273257	chromatin interactions
ENSG00000249700	chromatin interactions
ENSG00000196428	chromatin interactions

Extended variants
information (count: 110 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:110 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs572901478	chr4:56261603-56261604	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
2	rs34887847	chr4:56261622-56261623	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
3	rs545015270	chr4:56261635-56261636	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
4	rs182512000	chr4:56261637-56261638	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
5	rs376002890	chr4:56261668-56261669	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
6	rs369344214	chr4:56261689-56261690	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
7	rs371303900	chr4:56261708-56261709	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
8	rs530578887	chr4:56261714-56261715	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
9	rs550753838	chr4:56261754-56261755	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
10	rs560891120	chr4:56261763-56261764	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
11	rs372448770	chr4:56261784-56261785	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
12	rs375641461	chr4:56261806-56261807	Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
13	rs117671958	chr4:56261826-56261827	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
14	rs189258177	chr4:56261860-56261861	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
15	rs181954774	chr4:56261867-56261868	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
16	rs185688196	chr4:56261883-56261884	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
17	rs551354533	chr4:56261891-56261892	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
18	rs529292805	chr4:56261907-56261908	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
19	rs571418793	chr4:56261920-56261921	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
20	rs370247191	chr4:56261923-56261924	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
21	rs116554825	chr4:56261930-56261931	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
22	rs117926813	chr4:56261939-56261940	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
23	rs567794230	chr4:56261949-56261950	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
24	rs566073432	chr4:56261953-56261954	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
25	rs536830935	chr4:56261966-56261967	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
26	rs553748078	chr4:56261969-56261970	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
27	rs190539209	chr4:56261972-56261973	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
28	rs372082472	chr4:56261974-56261975	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
29	rs558540025	chr4:56261980-56261981	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
30	rs374094979	chr4:56261982-56261983	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
31	rs575431592	chr4:56261995-56261996	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
32	rs1962453	chr4:56261999-56262000	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs561022787	chr4:56262010-56262011	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
34	rs115066689	chr4:56262022-56262023	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
35	rs540420392	chr4:56262045-56262046	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
36	rs560058387	chr4:56262142-56262143	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
37	rs532235169	chr4:56262160-56262161	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
38	rs551366873	chr4:56262169-56262170	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
39	rs367643890	chr4:56262188-56262189	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
40	rs370944338	chr4:56262199-56262200	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
41	rs116687212	chr4:56262210-56262211	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
42	rs551050842	chr4:56262242-56262243	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
43	rs550821940	chr4:56262255-56262256	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
44	rs567743839	chr4:56262260-56262261	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
45	rs536484885	chr4:56262284-56262285	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
46	rs553562943	chr4:56262327-56262328	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
47	rs1128141	chr4:56262374-56262375	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs376472202	chr4:56262410-56262411	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
49	rs569903895	chr4:56262499-56262500	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
50	rs539310683	chr4:56262528-56262529	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	22183965	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	21922591	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Parkinson disease	21956041	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Glioblastoma multiforme	19435819	CNVD
Multiple myeloma	16616336	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Ovarian neoplasms	16753589	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Glioblastoma	17504929	CNVD
Glioblastoma	16823502	CNVD
Melanoma	16908931	CNVD
Glioblastoma	20031968	CNVD
Medulloblastoma	19270706	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Olfactory neuroblastoma	18408657	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Rhabdomyosarcoma	16790082	CNVD
Gastrointestinal stromal cancer	17438095	CNVD
Colorectal cancer	16272173	CNVD
Lung cancer	19208797	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	19115005	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	21138945	CNVD
Cancer	22183965	CNVD
Autism	22543975	CNVD
Breast cancer	21785460	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:349 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:56233200-56261600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr4:56252400-56261600	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr4:56259400-56261600	Enhancers	Stomach Mucosa	stomach
4	chr4:56260000-56261600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr4:56261000-56261600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr4:56261000-56261600	Flanking Active TSS	K562	blood
7	chr4:56261200-56261600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr4:56261200-56261600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
9	chr4:56261200-56261600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr4:56261200-56261600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
11	chr4:56261200-56261600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr4:56261200-56261600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr4:56261200-56261600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
14	chr4:56261200-56261600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr4:56261200-56261600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
16	chr4:56261200-56261600	Flanking Active TSS	Brain Anterior Caudate	brain
17	chr4:56261200-56261600	Flanking Active TSS	Brain Hippocampus Middle	brain
18	chr4:56261200-56261600	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
19	chr4:56261200-56261600	Flanking Active TSS	GM12878-XiMat	blood
20	chr4:56261200-56261800	Flanking Active TSS	Primary B cells from cord blood	blood
21	chr4:56261200-56261800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
22	chr4:56261200-56261800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
23	chr4:56261200-56261800	Flanking Active TSS	HepG2	liver
24	chr4:56261200-56261800	Flanking Active TSS	HUVEC	blood vessel
25	chr4:56261200-56261800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
26	chr4:56261200-56262000	Active TSS	Fetal Brain Male	brain
27	chr4:56261200-56262600	Active TSS	Primary T regulatory cells fromperipheralblood	blood
28	chr4:56261200-56263000	Active TSS	Fetal Brain Female	brain
29	chr4:56261200-56263400	Active TSS	iPS-20b Cell Line	embryonic stem cell
30	chr4:56261200-56263400	Active TSS	Osteobl	bone
31	chr4:56261200-56264800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
32	chr4:56261200-56265200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr4:56261400-56261600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr4:56261400-56261600	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr4:56261400-56261600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
36	chr4:56261400-56261600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr4:56261400-56261600	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
38	chr4:56261400-56261600	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
39	chr4:56261400-56261600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr4:56261400-56261600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
41	chr4:56261400-56261600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
42	chr4:56261400-56261600	Flanking Active TSS	Primary B cells from peripheral blood	blood
43	chr4:56261400-56261600	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
44	chr4:56261400-56261600	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
45	chr4:56261400-56261600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr4:56261400-56261600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr4:56261400-56261600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr4:56261400-56261600	Flanking Active TSS	Adipose Nuclei	Adipose
49	chr4:56261400-56261600	Flanking Active TSS	Brain Angular Gyrus	brain
50	chr4:56261400-56261600	Flanking Active TSS	Brain Cingulate Gyrus	brain

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