Variant report

Variant	esv3440944
Chromosome Location	chr3:49161498-49164296
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:129)
CpG islands
(count:61)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:129 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr3:49162840-49162990	K562	blood:	n/a	n/a
2	CTCF	chr3:49162780-49162930	GM12865	blood:	n/a	n/a
3	CTCF	chr3:49162843-49162953	HepG2	liver:	n/a	n/a
4	CTCF	chr3:49162800-49162950	GM12874	blood:	n/a	n/a
5	CTCF	chr3:49162840-49162990	HPAF	blood vessel:	n/a	n/a
6	CTCF	chr3:49162825-49162968	MCF-7	breast:	n/a	n/a
7	CTCF	chr3:49162788-49163007	GM19239	blood:	n/a	n/a
8	CTCF	chr3:49162797-49162962	MCF-7	breast:	n/a	n/a
9	CTCF	chr3:49163180-49163330	GM12864	blood:	n/a	n/a
10	CTCF	chr3:49162831-49162960	MCF-7	breast:	n/a	n/a
11	CTCF	chr3:49162800-49162950	GM12866	blood:	n/a	n/a
12	CTCF	chr3:49162860-49163010	AG09319	gingival:	n/a	n/a
13	CTCF	chr3:49162821-49162976	GM10248	blood:	n/a	n/a
14	CTCF	chr3:49162800-49162950	GM12868	blood:	n/a	n/a
15	CTCF	chr3:49162800-49162950	GM12865	blood:	n/a	n/a
16	CTCF	chr3:49162820-49162970	GM12865	blood:	n/a	n/a
17	CTCF	chr3:49162800-49162950	HL-60	blood:	n/a	n/a
18	CTCF	chr3:49162800-49162950	HMF	breast:	n/a	n/a
19	CTCF	chr3:49162780-49162930	GM12867	blood:	n/a	n/a
20	CTCF	chr3:49162840-49162990	A549	lung:	n/a	n/a
21	CTCF	chr3:49162772-49163009	GM19238	blood:	n/a	n/a
22	CTCF	chr3:49162780-49162930	HCFaa	heart:	n/a	n/a
23	CTCF	chr3:49162875-49162902	Spleen_OC	spleen:	n/a	n/a
24	CTCF	chr3:49162780-49162930	HA-sp	spinal cord:	n/a	n/a
25	CTCF	chr3:49162800-49162950	GM12870	blood:	n/a	n/a
26	CTCF	chr3:49162820-49162951	Fibrobl	skin:	n/a	n/a
27	CTCF	chr3:49162800-49162977	GM13977	blood:	n/a	n/a
28	CTCF	chr3:49162785-49163007	GM19240	blood:	n/a	n/a
29	CTCF	chr3:49162760-49162910	AG04449	skin:	n/a	n/a
30	CTCF	chr3:49162822-49162943	SK-N-SH_RA	brain:	n/a	n/a
31	CTCF	chr3:49162800-49162950	Hela-S3	cervix:	n/a	n/a
32	CTCF	chr3:49162580-49162730	A549	lung:	n/a	chr3:49162603-49162616
33	CTCF	chr3:49162780-49162930	HEK293	kidney:	n/a	n/a
34	CTCF	chr3:49162780-49162930	GM12873	blood:	n/a	n/a
35	CTCF	chr3:49162751-49163021	GM12891	blood:	n/a	n/a
36	CTCF	chr3:49162820-49162970	NB4	blood:	n/a	n/a
37	CTCF	chr3:49162780-49162930	GM12875	blood:	n/a	n/a
38	CTCF	chr3:49162800-49162950	GM12871	blood:	n/a	n/a
39	CTCF	chr3:49162820-49162970	GM06990	blood:	n/a	n/a
40	CTCF	chr3:49162800-49162950	AG04449	skin:	n/a	n/a
41	CTCF	chr3:49162800-49162950	WERI-Rb-1	eye:	n/a	n/a
42	CTCF	chr3:49162780-49162930	AG10803	skin:	n/a	n/a
43	CTCF	chr3:49162816-49162977	MCF-7	breast:	n/a	n/a
44	CTCF	chr3:49162817-49162957	LNCaP	prostate:	n/a	n/a
45	CTCF	chr3:49162809-49162972	MCF-7	breast:	n/a	n/a
46	CTCF	chr3:49162780-49162930	AG04450	lung:	n/a	n/a
47	CTCF	chr3:49162780-49162930	HUVEC	blood vessel:	n/a	n/a
48	CTCF	chr3:49162780-49162930	GM12869	blood:	n/a	n/a
49	CTCF	chr3:49162820-49162970	GM12873	blood:	n/a	n/a
50	CTCF	chr3:49162780-49162930	GM12864	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:49162453-49162503	HUVEC	blood vessel:	n/a
2	chr3:49162453-49162503	HEEpiC	esophagus:	n/a
3	chr3:49162453-49162503	SK-N-SH	brain:	n/a
4	chr3:49162453-49162503	IMR90	lung:	fetal
5	chr3:49162453-49162503	Hepatocyte	liver:	n/a
6	chr3:49162453-49162503	HNPCEpiC	eye:	n/a
7	chr3:49162453-49162503	PrEC	prostate:	n/a
8	chr3:49162453-49162503	HL-60	blood:	n/a
9	chr3:49162453-49162503	HEK293	kidney:	embryo
10	chr3:49162453-49162503	HIPEpiC	eye:	n/a
11	chr3:49162453-49162503	NHBE	bronchial:	n/a
12	chr3:49162453-49162503	AG10803	skin:	n/a
13	chr3:49162453-49162503	PFSK-1	brain:	n/a
14	chr3:49162453-49162503	HPAEpiC	pulmonary alveolar:	n/a
15	chr3:49162453-49162503	HCPEpiC	choroid plexus:	n/a
16	chr3:49162453-49162503	SAEC	small airway:	n/a
17	chr3:49162453-49162503	GM12891	blood:	n/a
18	chr3:49162453-49162503	GM19239	blood:	n/a
19	chr3:49162453-49162503	RPTEC	kidney:	n/a
20	chr3:49162453-49162503	ovcar-3	ovarian:	n/a
21	chr3:49162453-49162503	HRCEpiC	kidney:	n/a
22	chr3:49162453-49162503	NT2-D1	testis:	n/a
23	chr3:49162453-49162503	NB4	blood:	n/a
24	chr3:49162453-49162503	AG09319	gingival:	n/a
25	chr3:49162453-49162503	Jurkat	blood:	n/a
26	chr3:49162453-49162503	GM12892	blood:	n/a
27	chr3:49162453-49162503	GM06990	blood:	n/a
28	chr3:49162453-49162503	MCF10A-Er-Src	breast:	n/a
29	chr3:49162453-49162503	AG04450	lung:	fetal
30	chr3:49162453-49162503	HCF	heart:	n/a
31	chr3:49162453-49162503	CMK	blood:	n/a
32	chr3:49162453-49162503	SK-N-SH_RA	brain:	n/a
33	chr3:49162453-49162503	HAEpiC	amniotic membrane:	n/a
34	chr3:49162453-49162503	AoSMC	blood vessel:	n/a
35	chr3:49162453-49162503	GM12878	blood:	n/a
36	chr3:49162453-49162503	LNCaP	prostate:	n/a
37	chr3:49162453-49162503	HepG2	liver:	n/a
38	chr3:49162453-49162503	SK-N-MC	brain:	n/a
39	chr3:49162453-49162503	H1-hESC	embryonic stem cell:	embryo
40	chr3:49162453-49162503	HMEC	breast:	n/a
41	chr3:49162453-49162503	HRE	kidney:	n/a
42	chr3:49162453-49162503	HCT-116	colon:	n/a
43	chr3:49162453-49162503	PANC-1	pancreas:	n/a
44	chr3:49162453-49162503	HRPEpiC	eye:	n/a
45	chr3:49162453-49162503	BE2_C	brain:	n/a
46	chr3:49162453-49162503	Caco-2	colon:	n/a
47	chr3:49162453-49162503	T-47D	breast:	n/a
48	chr3:49162453-49162503	AG04449	skin:	fetal
49	chr3:49162453-49162503	BJ	skin:	n/a
50	chr3:49162453-49162503	MCF-7	breast:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:49155018..49163811-chr3:49167026..49172599,15	MCF-7	breast:
2	chr3:49157786..49160354-chr3:49162169..49166398,5	MCF-7	breast:
3	chr3:49038597..49040410-chr3:49159516..49163117,3	K562	blood:
4	chr3:49159120..49160770-chr3:49163347..49165357,2	MCF-7	breast:
5	chr3:49141891..49144060-chr3:49160282..49161903,2	MCF-7	breast:
6	chr3:49129847..49133782-chr3:49155056..49162049,12	MCF-7	breast:
7	chr3:49159674..49161381-chr3:49161428..49163145,2	MCF-7	breast:
8	chr3:49162223..49164770-chr3:49168715..49171164,3	MCF-7	breast:
9	chr3:49158149..49166168-chr3:49166363..49171688,12	K562	blood:
10	chr3:49157336..49159924-chr3:49160004..49161894,2	MCF-7	breast:
11	chr3:49058464..49060855-chr3:49163204..49165985,2	K562	blood:

No data

Variant related genes	Relation type
USP19	TF binding region
LAMB2	TF binding region
USP19	CpG island
LAMB2	CpG island
ENSG00000178149	chromatin interactions
ENSG00000198218	chromatin interactions
ENSG00000172046	chromatin interactions
ENSG00000178467	chromatin interactions
ENSG00000172037	chromatin interactions
ENSG00000178057	chromatin interactions
ENSG00000172053	chromatin interactions

Extended variants
information (count: 152 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:152 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs138774635	chr3:49161515-49161516	Weak transcription Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
2	rs569870849	chr3:49161608-49161609	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
3	rs537231973	chr3:49161659-49161660	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
4	rs34290943	chr3:49161660-49161661	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs139893128	chr3:49161672-49161673	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs368064595	chr3:49161679-49161680	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs199570781	chr3:49161692-49161693	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs139821983	chr3:49161697-49161698	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs149719225	chr3:49161698-49161699	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
10	rs145578707	chr3:49161717-49161718	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
11	rs114005644	chr3:49161741-49161742	Weak transcription Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs367666620	chr3:49161753-49161754	Weak transcription Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs143016594	chr3:49161755-49161756	Weak transcription Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs191238589	chr3:49161759-49161760	Weak transcription Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
15	rs375793131	chr3:49161766-49161767	Weak transcription Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs79205978	chr3:49161800-49161801	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs79677861	chr3:49161830-49161831	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs140199337	chr3:49161853-49161854	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs150234642	chr3:49161854-49161855	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs376981766	chr3:49161861-49161862	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs1131800	chr3:49161862-49161863	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs369406683	chr3:49161882-49161883	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
23	rs373712709	chr3:49161922-49161923	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs143284092	chr3:49161923-49161924	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs377452734	chr3:49161948-49161949	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs543606035	chr3:49162003-49162004	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs373002075	chr3:49162014-49162015	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs149560677	chr3:49162037-49162038	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs200802954	chr3:49162043-49162044	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs377001423	chr3:49162044-49162045	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs147446447	chr3:49162060-49162061	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs35778375	chr3:49162100-49162101	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs201159870	chr3:49162134-49162135	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs1131799	chr3:49162147-49162148	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs368506627	chr3:49162172-49162173	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs201823350	chr3:49162173-49162174	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs373146572	chr3:49162230-49162231	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs1131798	chr3:49162237-49162238	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs148732023	chr3:49162268-49162269	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs529614319	chr3:49162269-49162270	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
41	rs146232955	chr3:49162282-49162283	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs34759087	chr3:49162284-49162285	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs149653966	chr3:49162298-49162299	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs530751136	chr3:49162299-49162300	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs370271440	chr3:49162320-49162321	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
46	rs145465720	chr3:49162321-49162322	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
47	rs1131797	chr3:49162327-49162328	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
48	rs374181186	chr3:49162366-49162367	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs368689467	chr3:49162380-49162381	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs372740647	chr3:49162402-49162403	Weak transcription Strong transcription Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Kartagener syndrome	16639409	CNVD
Biliary cancer	19435499	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute myeloid leukemia	17268525	CNVD
Salivary gland tumor	18059337	CNVD
Gastric cancer	16891809	CNVD
Night blindness	17160897	CNVD
Cancer	17160897	CNVD
Breast cancer	20409316	CNVD
Lung cancer	17297452	CNVD
Multiple myeloma	16616336	CNVD
Effusion lymphoma	18079361	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Urothelial cell carcinoma	18451213	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Melanoma	17363583	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medullary thyroid carcinoma	18765511	CNVD
abnormal development	18461090	CNVD
Developmental delay	21147756	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:159 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49156000-49162600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr3:49158200-49169600	Weak transcription	Fetal Brain Male	brain
3	chr3:49158400-49169200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr3:49158600-49163400	Strong transcription	HMEC	breast
5	chr3:49158600-49164600	Strong transcription	Muscle Satellite Cultured Cells	--
6	chr3:49158600-49164600	Strong transcription	NHLF	lung
7	chr3:49158600-49166600	Strong transcription	Aorta	Aorta
8	chr3:49158600-49167200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr3:49158600-49167600	Strong transcription	Gastric	stomach
10	chr3:49158600-49168600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr3:49158600-49168600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr3:49158600-49168800	Strong transcription	Osteobl	bone
13	chr3:49158800-49162200	Strong transcription	A549	lung
14	chr3:49158800-49162400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr3:49158800-49162600	Strong transcription	NH-A	brain
16	chr3:49158800-49163400	Strong transcription	HUVEC	blood vessel
17	chr3:49158800-49164000	Strong transcription	NHDF-Ad	bronchial
18	chr3:49158800-49164200	Strong transcription	Duodenum Smooth Muscle	Duodenum
19	chr3:49158800-49164600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr3:49158800-49166600	Strong transcription	Fetal Lung	lung
21	chr3:49158800-49167000	Strong transcription	Left Ventricle	heart
22	chr3:49158800-49167800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr3:49158800-49168000	Strong transcription	Fetal Stomach	stomach
24	chr3:49158800-49168400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr3:49158800-49168400	Strong transcription	Placenta Amnion	Placenta Amnion
26	chr3:49158800-49168600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr3:49158800-49168800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr3:49158800-49169200	Weak transcription	Brain Cingulate Gyrus	brain
29	chr3:49158800-49169200	Weak transcription	Brain Germinal Matrix	brain
30	chr3:49158800-49169400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr3:49159000-49161800	Weak transcription	Stomach Mucosa	stomach
32	chr3:49159000-49162000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr3:49159000-49162600	Strong transcription	iPS-15b Cell Line	embryonic stem cell
34	chr3:49159000-49162800	Strong transcription	H9 Cell Line	embryonic stem cell
35	chr3:49159000-49163800	Strong transcription	Rectal Mucosa Donor 29	rectum
36	chr3:49159000-49164200	Strong transcription	Esophagus	oesophagus
37	chr3:49159000-49164200	Strong transcription	Right Ventricle	heart
38	chr3:49159000-49164200	Strong transcription	Sigmoid Colon	Sigmoid Colon
39	chr3:49159000-49164400	Strong transcription	HSMMtube	muscle
40	chr3:49159000-49164600	Strong transcription	HUES6 Cell Line	embryonic stem cell
41	chr3:49159000-49164600	Strong transcription	Cortex derived primary cultured neurospheres	brain
42	chr3:49159000-49164600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr3:49159000-49165600	Strong transcription	Fetal Muscle Trunk	muscle
44	chr3:49159000-49166800	Strong transcription	Stomach Smooth Muscle	stomach
45	chr3:49159000-49167000	Strong transcription	Placenta	Placenta
46	chr3:49159000-49167600	Strong transcription	Adipose Nuclei	Adipose
47	chr3:49159000-49167800	Strong transcription	Colon Smooth Muscle	Colon
48	chr3:49159000-49168400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
49	chr3:49159000-49169000	Strong transcription	Fetal Intestine Small	intestine
50	chr3:49159000-49169200	Weak transcription	Brain Angular Gyrus	brain

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